Pre_GI Gene

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Host: NC_009664 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009664:4423829 Kineococcus radiotolerans SRS30216, complete genome

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
44238294424569741short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
44248734425499627transcriptional regulator TetR familyQuickGO ontologyBLASTP
44255274426396870NADP oxidoreductase coenzyme F420-dependentQuickGO ontologyBLASTP
44264434427162720hypothetical protein
44271664427534369hypothetical proteinBLASTP
44277334428248516GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
44283464428801456hypothetical proteinBLASTP
44288224429373552hypothetical protein
44294454429828384hypothetical protein
44299874430652666hypothetical proteinBLASTP
44308514431720870hypothetical protein
44318934432393501hypothetical protein
44323604432680321hypothetical proteinBLASTP
44329714433495525hypothetical protein
44337354434391657hypothetical protein
44347324434959228hypothetical protein
443528444364651182protein of unknown function DUF1016QuickGO ontologyBLASTP
443727244386841413hypothetical proteinBLASTP
443883444409362103ATPase-likeQuickGO ontologyBLASTP
444119844427451548metallophosphoesteraseQuickGO ontologyBLASTP
444274544452342490SMC domain proteinQuickGO ontologyBLASTP
44453554446227873plasmid encoded RepA proteinQuickGO ontologyBLASTP
444643444475911158hypothetical protein
44478024448308507hypothetical protein
44488134449631819protein of unknown function UPF0187QuickGO ontologyBLASTP
444983544512321398Endo-14-beta-xylanaseQuickGO ontologyBLASTP
44515164451701186hypothetical protein
44517284452351624transcriptional regulator TetR familyQuickGO ontologyBLASTP
445271144540391329extracellular solute-binding protein family 1QuickGO ontologyBLASTP
44540434454984942binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
44549814455883903binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
44559264456336411hypothetical protein
44563264457084759Xylose isomerase domain protein TIM barrelQuickGO ontologyBLASTP
445708144582201140oxidoreductase domain proteinQuickGO ontologyBLASTP
445876144610432283glycoside hydrolase family 3 domain proteinQuickGO ontologyBLASTP
446120744623971191integral membrane sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
44623944463122729two component transcriptional regulator LuxR familyQuickGO ontologyBLASTP
446324844656712424putative membrane transport proteinQuickGO ontologyBLASTP
446594544676721728drug resistance transporter EmrBQacA subfamilyQuickGO ontologyBLASTP
446818244695221341major facilitator superfamily MFS_1QuickGO ontologyBLASTP
446951944720742556alpha-L-rhamnosidaseQuickGO ontologyBLASTP
447217344739331761glycoside hydrolase family 43QuickGO ontologyBLASTP
447417444768822709glycoside hydrolase family 3 domain proteinQuickGO ontologyBLASTP
447714644793922247glycoside hydrolase family 3 domain proteinQuickGO ontologyBLASTP
44796534480624972regulatory protein LacIQuickGO ontologyBLASTP
448066744820221356major facilitator superfamily MFS_1QuickGO ontologyBLASTP
448218344848312649glycoside hydrolase family 2 sugar bindingQuickGO ontologyBLASTP
448487644860421167glycoside hydrolase family 1QuickGO ontologyBLASTP
44860684486898831short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
448701444882311218cytochrome P450QuickGO ontologyBLASTP
44882314488431201putative ferredoxinQuickGO ontology
448851144897551245FAD-dependent pyridine nucleotide-disulphide oxidoreductaseQuickGO ontologyBLASTP
44898284490157330hypothetical protein
449024644918501605glycoside hydrolase family 35QuickGO ontologyBLASTP
449200444931791176integral membrane sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
44931764493853678two component transcriptional regulator LuxR familyQuickGO ontologyBLASTP
44940484494971924protein of unknown function DUF418QuickGO ontology
44949814495232252hypothetical protein
44954884496201714restriction endonucleaseQuickGO ontologyBLASTP
44963424496806465hypothetical protein
44968034497147345hypothetical protein
44974234497638216hypothetical protein
44976974497864168hypothetical protein
44981384498956819hypothetical protein
449928045003621083hypothetical protein
45005694500910342hypothetical protein
45010984502078981short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
45020754502857783short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
45028734503178306hypothetical protein
45032114503444234hypothetical protein
450345245048041353condensation domain proteinQuickGO ontologyBLASTP
45062244507144921hypothetical protein
45077724508545774short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
450854245099061365major facilitator superfamily MFS_1QuickGO ontologyBLASTP
450994945112681320Histidinol dehydrogenaseQuickGO ontologyBLASTP
451152945125451017Alanine racemaseQuickGO ontologyBLASTP
451264045137641125Alcohol dehydrogenase GroES domain proteinQuickGO ontologyBLASTP
45140854514396312plasmid encoded RepA proteinQuickGO ontologyBLASTP
45145824515277696GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
45154604516224765amidohydrolase 2QuickGO ontologyBLASTP
45167504517262513regulator of ribonuclease activity AQuickGO ontologyBLASTP
45173154517563249hypothetical protein
45176354518357723transcriptional regulator GntR familyQuickGO ontologyBLASTP
451890645203421437citrateH symporter CitMHS familyQuickGO ontologyBLASTP
4520470452160311343-isopropylmalate dehydrogenaseQuickGO ontologyBLASTP
45217784522503726AspGlu racemaseQuickGO ontologyBLASTP
452263245241671536type III effector Hrp-dependent outersQuickGO ontologyBLASTP
45241644524844681class II aldolaseadducin family proteinQuickGO ontologyBLASTP
45249484525388441UspA domain proteinQuickGO ontologyBLASTP
452558645266381053fructose-16-bisphosphatase class IIQuickGO ontologyBLASTP
45268884527403516hypothetical protein
45273844528037654secreted proteinQuickGO ontologyBLASTP
45281604528411252hypothetical protein
45284824529174693transcriptional regulator TetR familyQuickGO ontologyBLASTP
452917145307841614drug resistance transporter EmrBQacA subfamilyQuickGO ontologyBLASTP
453095945323321374sodiumhydrogen exchangerQuickGO ontologyBLASTP
453297945347151737protein of unknown function DUF470QuickGO ontologyBLASTP
45349044535560657SNARE associated Golgi proteinQuickGO ontologyBLASTP
45356034535821219hypothetical protein
45358704536229360hypothetical protein
453626245376411380amine oxidaseQuickGO ontologyBLASTP
453787645389971122monooxygenase FAD-bindingQuickGO ontologyBLASTP
453967745407231047Alcohol dehydrogenase GroES domain proteinQuickGO ontologyBLASTP
45409074541338432hypothetical proteinBLASTP
45414434541985543hypothetical protein
45419824542311330transcriptional regulator XRE familyQuickGO ontologyBLASTP
45424564543307852short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
454369345448921200hypothetical protein
45450294545421393hypothetical proteinBLASTP
45456064546031426hypothetical protein
45461254546574450hypothetical proteinBLASTP
45467594547127369hypothetical protein
454741545490101596methyl-accepting chemotaxis sensory transducerQuickGO ontologyBLASTP
45493814550289909response regulator receiver and ANTAR domain proteinQuickGO ontologyBLASTP
45505294550846318transposase IS3IS911 family proteinQuickGO ontologyBLASTP
45519224552281360BLASTP
455242045545192100diguanylate cyclaseQuickGO ontologyBLASTP
45554014556168768PAS fold-3 domain proteinQuickGO ontologyBLASTP
45566244557079456response regulator receiver proteinQuickGO ontologyBLASTP
45577504558508759hypothetical protein
45585054559197693peptidase S26B signal peptidaseQuickGO ontologyBLASTP
455938845605241137hypothetical protein
456052145622241704hypothetical protein
45622054562774570hypothetical protein
45629014563254354hypothetical protein
45632084563549342hypothetical protein
456354645655972052diguanylate cyclasephosphodiesteraseQuickGO ontologyBLASTP
45658054566173369hypothetical proteinBLASTP
456652445675701047diguanylate cyclase with PASPAC sensorQuickGO ontologyBLASTP
456783445691651332diguanylate phosphodiesteraseQuickGO ontologyBLASTP
45693514569524174hypothetical protein
456988645719822097diguanylate cyclaseQuickGO ontologyBLASTP
45723784573082705putative GAF sensor proteinQuickGO ontologyBLASTP
45741744574578405hypothetical proteinBLASTP
45747174575373657hypothetical proteinBLASTP
457537045766741305Pyruvate water dikinaseQuickGO ontologyBLASTP
45766784577169492hypothetical proteinBLASTP
45773754578010636hypothetical protein
45782214579000780putative GAF sensor proteinQuickGO ontologyBLASTP
45791284579463336hypothetical protein
45794764579784309hypothetical protein
457979945809891191NADHflavin oxidoreductaseNADH oxidaseQuickGO ontologyBLASTP
45811374581973837alphabeta hydrolase foldQuickGO ontologyBLASTP
45822864582834549hypothetical protein
45828384583395558hypothetical proteinBLASTP
45838164584706891hypothetical proteinBLASTP
45847034585407705hypothetical proteinBLASTP
45858594586386528hypothetical protein
45868414587056216hypothetical protein
45870894587538450Activator of Hsp90 ATPase 1 family proteinQuickGO ontologyBLASTP
45875794587995417hypothetical protein
45879744588393420hypothetical protein
45885214589435915putative transcriptional regulator MerR familyQuickGO ontologyBLASTP
45895714590335765hypothetical protein
45904364590792357hypothetical protein
45909314591770840hypothetical protein
45917674592417651RNA polymerase sigma-24 subunit ECF subfamilyQuickGO ontologyBLASTP
45925354592819285hypothetical protein
45929814593553573hypothetical protein
45937454594530786hypothetical protein
459488345960851203Stage II sporulation E family proteinQuickGO ontologyBLASTP
45963834596874492hypothetical protein
45970704597756687protein tyrosineserine phosphataseQuickGO ontologyBLASTP
45980844598530447hypothetical proteinBLASTP
45986594599420762NmrA family proteinQuickGO ontologyBLASTP
459950246005301029helix-turn-helix- domain containing protein AraC typeQuickGO ontologyBLASTP
46006964601193498hypothetical proteinBLASTP
460141046028161407hypothetical proteinBLASTP
46028684603197330hypothetical protein
46031994603777579hypothetical protein
46037534603917165hypothetical protein
46040234604457435hypothetical protein
46044624604899438hypothetical protein
46049194605740822Integrase catalytic regionQuickGO ontologyBLASTP
46057884606114327transposase IS3IS911 family proteinQuickGO ontologyBLASTP
46061204606356237hypothetical proteinBLASTP
46065014607262762hypothetical proteinBLASTP
46073974607801405hypothetical protein
46080814608686606ThiJPfpI domain proteinQuickGO ontologyBLASTP
46090184609767750CMPdCMP deaminase zinc-bindingQuickGO ontologyBLASTP
46099644610359396hypothetical protein
46105074610941435hypothetical proteinBLASTP
46110104611795786hypothetical protein
46118304612117288hypothetical protein
46123114612541231hypothetical protein
461254546137381194hypothetical protein
461375646147991044hypothetical proteinBLASTP
46147964615419624RNA polymerase sigma-24 subunit ECF subfamilyQuickGO ontologyBLASTP
46154504615638189hypothetical protein
46156354616162528hypothetical proteinBLASTP
46162884616773486hypothetical protein
46169894617363375hypothetical protein
46175084617726219hypothetical protein
46183244618896573hypothetical proteinBLASTP
46190304619611582hypothetical proteinBLASTP
46198534620401549hypothetical proteinBLASTP
46204654620875411Antibiotic biosynthesis monooxygenaseQuickGO ontologyBLASTP
46210304621701672hypothetical proteinBLASTP
46218234622272450hypothetical proteinBLASTP
46224274623038612hypothetical proteinBLASTP
46232974623923627hypothetical protein
46240974624363267hypothetical protein
46245204625191672RNA polymerase sigma-24 subunit ECF subfamilyQuickGO ontologyBLASTP
46251884625856669hypothetical protein
46259324626441510hypothetical proteinBLASTP
46265334627396864hypothetical proteinBLASTP
46276804628195516hypothetical protein
462837346300671695hypothetical proteinBLASTP
46300784630323246hypothetical protein
46304624631406945aminoglycoside phosphotransferaseQuickGO ontologyBLASTP
46315564632110555hypothetical proteinBLASTP
46322984632969672hypothetical proteinBLASTP
46330654633301237hypothetical protein
463343846347181281major facilitator superfamily MFS_1QuickGO ontologyBLASTP
46347154635290576transcriptional regulator MarR familyQuickGO ontologyBLASTP
46354884636234747hypothetical protein
46366424637043402hypothetical proteinBLASTP
46374504638100651MOSC domain containing proteinQuickGO ontologyBLASTP
46382404639238999aminoglycoside phosphotransferaseQuickGO ontologyBLASTP
46394754639918444pentapeptide repeat proteinQuickGO ontologyBLASTP
46400064640668663protein of unknown function UPF0157QuickGO ontologyBLASTP
46407324641013282hypothetical proteinBLASTP
46410104641261252hypothetical proteinBLASTP
46413134641786474NUDIX hydrolaseQuickGO ontologyBLASTP
46419674642476510hypothetical proteinBLASTP
46428364643333498hypothetical protein
46434774643683207hypothetical protein
46440464644288243hypothetical protein
46444934645062570hypothetical protein
46452734645599327hypothetical protein
46456304645821192hypothetical protein
46458404646166327hypothetical protein
46464964647053558histone family protein DNA-binding proteinQuickGO ontologyBLASTP
46470504647337288hypothetical protein
46473494648035687hypothetical protein
46480654648406342hypothetical protein
46484104649252843plasmid encoded RepA proteinQuickGO ontologyBLASTP
46496284650449822hypothetical protein
46506444650817174BLASTP
46511054651956852peptidase domain proteinQuickGO ontology
465240646535571152conserved hypothetical protein putative signal peptideQuickGO ontologyBLASTP
46536674653963297transcription factor WhiBQuickGO ontologyBLASTP
46541184654651534hypothetical protein
46546744655207534hypothetical protein
465557746583482772regulatory protein LuxRQuickGO ontologyBLASTP
46591314659853723transcriptional regulator TetR familyQuickGO ontologyBLASTP
466012146629882868regulatory protein LuxRQuickGO ontologyBLASTP
46630824663201120hypothetical protein
466319846645681371protein of unknown function DUF214QuickGO ontology
46645654664873309hypothetical protein
46648704665607738ABC transporter relatedQuickGO ontologyBLASTP
46656724666370699ThiJPfpI domain proteinQuickGO ontologyBLASTP
466643546674601026aldoketo reductaseQuickGO ontologyBLASTP
46677404668705966Alphabeta hydrolase fold-3 domain proteinQuickGO ontologyBLASTP
46688554669109255hypothetical protein
46691534669872720hypothetical proteinBLASTP
46699774670345369hypothetical protein
46706524671248597putative transcriptional regulator MerR familyQuickGO ontologyBLASTP
467149146742592769regulatory protein LuxRQuickGO ontologyBLASTP
46745014674992492RNA polymerase sigma-24 subunit ECF subfamilyQuickGO ontologyBLASTP
46752184675811594NADP oxidoreductase coenzyme F420-dependentQuickGO ontologyBLASTP
467582246769881167low temperature requirement AQuickGO ontologyBLASTP
46771614677775615protein of unknown function DUF1486QuickGO ontologyBLASTP
46778414678629789alphabeta hydrolase foldQuickGO ontologyBLASTP
467884246806831842drug resistance transporter EmrBQacA subfamilyQuickGO ontologyBLASTP
46810284681675648NADP oxidoreductase coenzyme F420-dependentQuickGO ontologyBLASTP
468168446827181035aldoketo reductaseQuickGO ontologyBLASTP
46829434683254312hypothetical protein
46834834683872390hypothetical protein
46839634684331369hypothetical proteinBLASTP
468438546860131629histidine kinaseQuickGO ontologyBLASTP