Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4490246 Kineococcus radiotolerans SRS30216, complete genome

Start: 4490246, End: 4491850, Length: 1605

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013929:8525000:8528828852882885304411614Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein8e-62238
NC_011886:3903343:3910666391066639123061641Arthrobacter chlorophenolicus A6, complete genomeglycoside hydrolase family 352e-50200
NC_016631:4384251:4397475439747543991331659Granulicella mallensis MP5ACTX8 chromosome, complete genomeglycoside hydrolase family protein5e-43176
NC_015057:268000:2788252788252805251701Acidobacterium sp. MP5ACTX9 plasmid pACIX901, complete sequenceglycoside hydrolase family 354e-41169