Pre_GI: BLASTP Hits

Some Help

Query: NC_009664:4423829:4528482 Kineococcus radiotolerans SRS30216, complete genome

Start: 4528482, End: 4529174, Length: 693

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016641:1369424:137716413771641377715552Paenibacillus terrae HPL-003 chromosome, complete genomeTetR family transcriptional regulator2e-0962.8
NC_004461:205068:209357209357209896540Staphylococcus epidermidis ATCC 12228, complete genometranscriptional regulator2e-0962.8
NC_000911:2747604:276317027631702763733564Synechocystis sp. PCC 6803, complete genomehypothetical protein2e-0962.4
NC_017039:2745432:276099827609982761561564Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein2e-0962.4
NC_017052:2745420:276098627609862761549564Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein2e-0962.4
NC_017277:2746421:276198727619872762550564Synechocystis sp. PCC 6803, complete genomehypothetical protein2e-0962.4
NC_013209:1406793:141734514173451417926582Acetobacter pasteurianus IFO 3283-01, complete genometranscriptional regulator TetR1e-0860.5
NC_017100:1407804:141835614183561418937582Acetobacter pasteurianus IFO 3283-03, complete genometranscriptional regulator TetR1e-0860.5
NC_017108:1406787:141733914173391417920582Acetobacter pasteurianus IFO 3283-12, complete genometranscriptional regulator TetR1e-0860.5
NC_017111:1406787:141733914173391417920582Acetobacter pasteurianus IFO 3283-32, complete genometranscriptional regulator TetR1e-0860.5
NC_017121:1406787:141733914173391417920582Acetobacter pasteurianus IFO 3283-07, complete genometranscriptional regulator TetR1e-0860.5
NC_017125:1407804:141835614183561418937582Acetobacter pasteurianus IFO 3283-22, complete genometranscriptional regulator TetR1e-0860.5
NC_017146:1407804:141835614183561418937582Acetobacter pasteurianus IFO 3283-26, complete genometranscriptional regulator TetR1e-0860.5
NC_017150:1406793:141734514173451417926582Acetobacter pasteurianus IFO 3283-01-42C, complete genometranscriptional regulator TetR1e-0860.5
NC_003902:1416000:142181514218151422441627Xanthomonas campestris pv. campestris str. ATCC 33913, completetranscriptional regulator2e-0756.2
NC_010688:3515885:352608335260833526709627Xanthomonas campestris pv. campestris, complete genometranscriptional regulator, TetR family2e-0756.2
NC_015690:3477573:349850234985023499104603Paenibacillus mucilaginosus KNP414 chromosome, complete genometranscriptional regulator4e-0754.7
NC_016935:4038265:405841140584114059013603Paenibacillus mucilaginosus 3016 chromosome, complete genometranscriptional regulator4e-0754.7
NC_013850:3340882:334530533453053345886582Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, TetR family8e-0753.9
NC_014171:1043961:105084010508401051376537Bacillus thuringiensis BMB171 chromosome, complete genomeTetR family transcriptional regulator2e-0652.8
NC_004722:1033000:103607710360771036613537Bacillus cereus ATCC 14579, complete genomeTranscriptional regulator, TetR family2e-0652.8
NC_008600:1071537:107692610769261077462537Bacillus thuringiensis str. Al Hakam, complete genometranscriptional regulator, TetR family4e-0652
NC_013174:23421:604976049761063567Jonesia denitrificans DSM 20603, complete genometranscriptional regulator, TetR family7e-0650.8