Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4537876 Kineococcus radiotolerans SRS30216, complete genome

Start: 4537876, End: 4538997, Length: 1122

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015312:5240653:5257175525717552583921218Pseudonocardia dioxanivorans CB1190 chromosome, complete genomemonooxygenase FAD-binding protein6e-24112
NC_013730:2558999:2558999255899925601531155Spirosoma linguale DSM 74, complete genomemonooxygenase FAD-binding protein1e-23110
NC_010338:588000:5982505982505993921143Caulobacter sp. K31, complete genomemonooxygenase FAD-binding3e-22106
NC_008686:1439328:1457084145708414582441161Paracoccus denitrificans PD1222 chromosome 1, complete sequencemonooxygenase, FAD-binding2e-20100
NC_019673:3041936:3058217305821730594911275Saccharothrix espanaensis DSM 44229 complete genomeFAD dependent oxidoreductase2e-20100
NC_003888:8613848:8614845861484586160501206Streptomyces coelicolor A3(2), complete genomesecreted oxidoreductase6e-2099
NC_006570:650291:6516096516096527991191Francisella tularensis subsp. tularensis Schu 4, complete genomehypothetical protein3e-1893.2
NC_008245:650243:6515616515616527511191Francisella tularensis subsp. tularensis FSC 198, complete genomemonooxygenase family protein3e-1893.2
NC_016933:726197:7275157275157287051191Francisella tularensis TIGB03 chromosome, complete genomeputative oxidoreductase3e-1893.2
NC_016937:650290:6516086516086527981191Francisella tularensis subsp. tularensis TI0902 chromosome,putative oxidoreductase3e-1893.2
NC_013235:402819:4188974188974200721176Nakamurella multipartita DSM 44233, complete genomemonooxygenase FAD-binding2e-1893.2
NC_009257:1023696:1037359103735910385371179Francisella tularensis subsp. tularensis WY96-3418 chromosome,hypothetical protein2e-1893.2
NC_008601:1094041:1107723110772311089011179Francisella tularensis subsp. novicida U112, complete genomeoxidoreductase3e-1892.8
NC_017249:263873:2779832779832791491167Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-1790.9
NC_014623:4683671:4687148468714846883621215Stigmatella aurantiaca DW4/3-1 chromosome, complete genomearomatic-ring hydroxylase2e-1790.5
NC_005773:106000:1080961080961093611266Pseudomonas syringae pv. phaseolicola 1448A, complete genomepyridine nucleotide-disulfide oxidoreductase2e-1687.4
NC_006361:2225072:2251558225155822527481191Nocardia farcinica IFM 10152, complete genomeputative monooxygenase1e-1687.4
NC_012988:731790:7595967595967608221227Methylobacterium extorquens DM4, complete genomeoxidoreductase3e-1686.3
NC_007005:98488:1023581023581037611404Pseudomonas syringae pv. syringae B728a, complete genomeFlavoprotein monooxygenase1e-1584.3
NC_013595:5221330:5226694522669452278391146Streptosporangium roseum DSM 43021, complete genomeputative oxidoreductase transmembrane protein4e-1582.8
NC_016027:2580477:2594529259452925958301302Gluconacetobacter xylinus NBRC 3288, complete genomepyridine nucleotide-disulfide oxidoreductase8e-1581.6
NC_015957:7348269:7350072735007273512141143Streptomyces violaceusniger Tu 4113 chromosome, complete genomeFAD dependent oxidoreductase8e-1581.6
NC_016010:1822212:1894766189476618959561191Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeFAD-dependent oxidoreductase3e-1479.7
NC_010545:236000:245853245853246848996Corynebacterium urealyticum DSM 7109, complete genomehypothetical protein1e-1274.7
NC_010336:1670000:167174016717401672513774Francisella philomiragia subsp. philomiragia ATCC 25017, completeoxidoreductase2e-1273.9
NC_016582:5769080:5769080576908057703121233Streptomyces bingchenggensis BCW-1 chromosome, complete genomemonooxygenase FAD-binding protein3e-1272.8
NC_018524:4988810:5003882500388250050901209Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeFAD binding domain protein1e-1170.9
NC_013093:5922777:5930579593057959317331155Actinosynnema mirum DSM 43827, complete genomemonooxygenase FAD-binding3e-1066.6
NC_008148:2231045:2251975225197522531141140Rubrobacter xylanophilus DSM 9941, complete genomemonooxygenase, FAD-binding protein4e-1066.2
NC_018691:1322389:1324592132459213261931602Alcanivorax dieselolei B5 chromosome, complete genomeMonooxygenase, FAD-binding protein1e-0964.7
NC_013131:9903320:9907343990734399084971155Catenulispora acidiphila DSM 44928, complete genomemonooxygenase FAD-binding2e-0963.5
NC_003888:8613848:8616047861604786172761230Streptomyces coelicolor A3(2), complete genomesecreted oxidoreductase3e-0963.5
NC_016514:1627664:1643479164347916446721194Enterobacter cloacae EcWSU1 chromosome, complete genome3-hydroxybenzoate 6-hydroxylase3e-0963.5
NC_015556:2265940:2308341230834123095671227Pseudomonas fulva 12-X chromosome, complete genomeFAD dependent oxidoreductase4e-0859.7
NC_014210:2372813:2400179240017924013601182Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,monooxygenase FAD-binding protein5e-0858.9
NC_009255:763157:7862267862267876111386Burkholderia vietnamiensis G4 chromosome 2, complete sequenceFAD-binding monooxygenase8e-0858.5
NC_015968:1618862:1636164163616416373181155Enterobacter asburiae LF7a chromosome, complete genomeFAD dependent oxidoreductase1e-0757.8
NC_014151:3687612:3706411370641137076341224Cellulomonas flavigena DSM 20109 chromosome, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein1e-0757.8
NC_007953:1043957:1057462105746210586371176Burkholderia xenovorans LB400 chromosome 3, complete sequenceSalicylate 1-monooxygenase2e-0757
NC_015559:1478114:1478114147811414792681155Marinomonas posidonica IVIA-Po-181 chromosome, complete genomeFAD dependent oxidoreductase2e-0757
NC_015856:1271295:1272631127263112740161386Collimonas fungivorans Ter331 chromosome, complete genomemonooxygenase, FAD-binding protein4e-0756.2
NC_009921:4903688:4915169491516949166081440Frankia sp. EAN1pec, complete genomePentachlorophenol monooxygenase2e-0653.9
NC_015566:2420287:2436637243663724377881152Serratia sp. AS12 chromosome, complete genomeSalicylate 1-monooxygenase8e-0651.6
NC_015567:2420169:2436519243651924376701152Serratia sp. AS9 chromosome, complete genomeSalicylate 1-monooxygenase8e-0651.6