Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4555401 Kineococcus radiotolerans SRS30216, complete genome

Start: 4555401, End: 4556168, Length: 768

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019745:2346970:2351713235171323570075295Gloeocapsa sp. PCC 7428, complete genomemulti-sensor hybrid histidine kinase1e-1067
NC_019745:2346970:2356994235699423623545361Gloeocapsa sp. PCC 7428, complete genomemulti-sensor hybrid histidine kinase1e-0963.5
NC_017955:3057592:307736830773683078120753Modestobacter marinus, complete genomePAS/PAC sensor protein5e-0858.5
NC_017955:3670670:3685066368506636871922127Modestobacter marinus, complete genometwo-component PAS/PAC sensor protein5e-0755.1
NC_015216:1941000:1945174194517419466731500Methanobacterium sp. AL-21 chromosome, complete genomesignal transduction histidine kinase6e-0754.7
NC_000911:3075896:3075896307589630785502655Synechocystis sp. PCC 6803, complete genomePleD-like protein1e-0653.9
NC_017039:3073724:3073724307372430763782655Synechocystis sp. PCC 6803 substr. PCC-P, complete genomePleD gene product1e-0653.9
NC_017052:3073713:3073713307371330763672655Synechocystis sp. PCC 6803 substr. PCC-N, complete genomeprotein PleD1e-0653.9
NC_013730:4573077:4587925458792545905702646Spirosoma linguale DSM 74, complete genomePAS/PAC sensor signal transduction histidine kinase2e-0653.1
NC_003901:2906493:2906493290649329091502658Methanosarcina mazei Go1, complete genomesensory transduction histidine kinase2e-0653.1
NC_008343:1250869:1258228125822812616743447Granulibacter bethesdensis CGDNIH1, complete genomechemotaxis protein methyltransferase2e-0652.8
NC_011146:2485625:2505098250509825070351938Geobacter bemidjiensis Bem, complete genomePAS/PAC sensor signal transduction histidine kinase4e-0652
NC_016582:1639375:1662621166262116654342814Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative regulatory protein phosphatase7e-0651.2
NC_009254:442360:4590134590134608271815Burkholderia vietnamiensis G4 chromosome 3, complete sequencediguanylate cyclase with PAS/PAC sensor8e-0650.8
NC_019745:2346970:2367232236723223697362505Gloeocapsa sp. PCC 7428, complete genomemulti-sensor hybrid histidine kinase9e-0650.8