Pre_GI: BLASTN Hits

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Query: NC_017986:4374979 Pseudomonas putida ND6 chromosome, complete genome

Start: 4374979, End: 4401125, Length: 26147

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015138:49059354905935493092624992Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete3e-31145BLASTN svgBLASTP svg
NC_014910:4026613*4026613405112124509Alicycliphilus denitrificans BC chromosome, complete genome9e-53216BLASTN svgBLASTP svg
NC_015422:4395388*4395388441939024003Alicycliphilus denitrificans K601 chromosome, complete genome9e-53216BLASTN svgBLASTP svg
NC_013851:33002783300278332129021013Allochromatium vinosum DSM 180 chromosome, complete genome3e-46194BLASTN svgBLASTP svg
NC_010740:1051000*1051000107626825269Brucella abortus S19 chromosome 2, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_007624:1046500*1046500107179425295Brucella melitensis biovar Abortus 2308 chromosome II, complete3e-0661.9BLASTN svgBLASTP svg
NC_010515:1618093*1618093165515937067Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence4e-21111BLASTN svgBLASTP svg
NC_010512:86693286693289209925168Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence1e-33153BLASTN svgBLASTP svg
NC_007298:77872377872382009941377Dechloromonas aromatica RCB, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_010002:66169666169668889327198Delftia acidovorans SPH-1, complete genome3e-43184BLASTN svgBLASTP svg
NC_015563:60678360678362671319931Delftia sp. Cs1-4 chromosome, complete genome3e-43184BLASTN svgBLASTP svg
NC_013223:68562868562871386228235Desulfohalobium retbaense DSM 5692, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014500:3023762*3023762306170037939Dickeya dadantii 3937 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014500:30717643071764309400622243Dickeya dadantii 3937 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_012779:2281700*2281700230559923900Edwardsiella ictaluri 93-146, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013508:1289159*1289159133392244764Edwardsiella tarda EIB202, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_014366:1814000*1814000183684822849Gamma proteobacterium HdN1, complete genome4e-21111BLASTN svgBLASTP svg
NC_012559:73185973185975630324445Laribacter hongkongensis HLHK9, complete genome2e-35159BLASTN svgBLASTP svg
NC_009654:3849774*3849774388986740094Marinomonas sp. MWYL1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_011757:748223*74822379542247200Methylobacterium chloromethanicum CM4, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_012808:594000*59400061960225603Methylobacterium extorquens AM1, complete genome4e-18101BLASTN svgBLASTP svg
NC_014562:1772842*1772842180089428053Pantoea vagans C9-1 chromosome, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_014562:18442681844268187632632059Pantoea vagans C9-1 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_004129:18487011848701187545426754Pseudomonas fluorescens Pf-5, complete genome01788BLASTN svgBLASTP svg
NC_007492:17355951735595175753521941Pseudomonas fluorescens PfO-1, complete genome01740BLASTN svgBLASTP svg
NC_009439:20545205454442723883Pseudomonas mendocina ymp, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_009512:1691930*1691930171807626147Pseudomonas putida F1, complete genome044980BLASTN svgBLASTP svg
NC_009512:22384372238437226259924163Pseudomonas putida F1, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_009512:43754524375452440539429943Pseudomonas putida F1, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_002947:49314764931476495751626041Pseudomonas putida KT2440, complete genome025520BLASTN svgBLASTP svg
NC_010501:4080937*4080937410672725791Pseudomonas putida W619, complete genome013400BLASTN svgBLASTP svg
NC_007912:27683632768363278966221300Saccharophagus degradans 2-40, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_006177:3192500*3192500321147918980Symbiobacterium thermophilum IAM 14863, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_007759:1356439*1356439139190335465Syntrophus aciditrophicus SB, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_019940:293476*29347631150418029Thioflavicoccus mobilis 8321 chromosome, complete genome4e-18101BLASTN svgBLASTP svg
NC_003919:2233000*2233000226150128502Xanthomonas axonopodis pv. citri str. 306, complete genome6e-20107BLASTN svgBLASTP svg
NC_003902:2211790*2211790223409922310Xanthomonas campestris pv. campestris str. ATCC 33913, complete8e-1383.8BLASTN svgBLASTP svg
NC_010688:2532929*2532929255774124813Xanthomonas campestris pv. campestris, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_007508:2234080*2234080225476820689Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome2e-22115BLASTN svgBLASTP svg