Pre_GI: BLASTP Hits

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Query: NC_017265:3790750:3799050 Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,

Start: 3799050, End: 3799289, Length: 240

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017160:676249:6832856832856846971413Yersinia pestis D182038 chromosome, complete genomeNa+/H+ antiporter family protein8e-31132
NC_004088:3923804:3933688393368839351391452Yersinia pestis KIM, complete genomehypothetical protein1e-30132
NC_008150:3495851:3506589350658935080401452Yersinia pestis Antiqua, complete genomehypothetical protein1e-30132
NC_005810:3272765:3278232327823232796831452Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein1e-30132
NC_003143:675622:6854006854006868511452Yersinia pestis CO92, complete genomehypothetical protein1e-30132
NC_008149:587689:5969305969305983811452Yersinia pestis Nepal516, complete genomemembrane protein1e-30132
NC_010465:660207:6656746656746671251452Yersinia pseudotuberculosis YPIII, complete genomeNa+/H+ antiporter NhaC1e-30132
NC_017154:671816:6810616810616825121452Yersinia pestis D106004 chromosome, complete genomehypothetical protein1e-30132
NC_006155:4062000:4072289407228940737401452Yersinia pseudotuberculosis IP 32953, complete genomeputative Na+/H+ antiporter, NhaC family1e-30132
NC_009708:633054:6385216385216399721452Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeNa+/H+ antiporter family protein1e-30132
NC_010159:1071937:1079454107945410808661413Yersinia pestis Angola, complete genomeNa+/H+ antiporter family protein8e-31132
NC_014029:729675:7389487389487403601413Yersinia pestis Z176003 chromosome, complete genomeNa+/H+ antiporter family protein8e-31132
NC_009381:460358:468324468324468818495Yersinia pestis Pestoides F chromosome, complete genome2e-30130
NC_007907:5404608:5421786542178654232311446Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-1477.4
NC_018870:2479114:2488367248836724898151449Thermacetogenium phaeum DSM 12270 chromosome, complete genomeNa+/H+ antiporter4e-0650.4