Pre_GI: BLASTP Hits

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Query: NC_016844:547069:563665 Treponema pallidum subsp. pallidum DAL-1 chromosome, complete

Start: 563665, End: 564936, Length: 1272

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This organism is the causative agent of endemic and venereal syphilis. This sexual transmitted disease was first discovered in Europe at the end of the fifteenth century, however, the causative agent was not identified until 1905. At one time syphilis was the third most commonly reported communicable disease in the USA. Syphilis is characterized by multiple clinical stages and long periods of latent, asymptomatic infection. Although effective therapies have been available since the introduction of penicillin, syphilis remains a global health problem.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021508:546592:5631885631885644591272Treponema pallidum subsp. pallidum SS14, complete genomeDNA-directed DNA polymerase III gamma and tau subunits0872
NC_017268:546376:5629725629725642431272Treponema pallidum subsp. pallidum str. Chicago chromosome,DNA polymerase III domain-containing protein0872
NC_010741:546573:5631685631685644391272Treponema pallidum subsp. pallidum SS14, complete genomepossible DNA polymerase III, gamma and tau subunits0872
NC_000919:545141:5617365617365630071272Treponema pallidum subsp. pallidum str. Nichols, complete genomeDNA polymerase III, gamma and tau subunits, putative0872
NC_016848:547115:5637115637115649821272Treponema pallidum subsp. pertenue str. CDC2 chromosome, completeDNA-directed DNA polymerase III gamma and tau subunits0872
NC_016843:547149:5637455637455650161272Treponema pallidum subsp. pertenue str. Gauthier chromosome,DNA-directed DNA polymerase III gamma and tau subunits0872
NC_016842:546661:5632575632575645281272Treponema pallidum subsp. pertenue str. SamoaD chromosome, completeDNA-directed DNA polymerase III gamma and tau subunits0872
NC_015714:542679:5592815592815605521272Treponema paraluiscuniculi Cuniculi A chromosome, complete genomeDNA-directed DNA polymerase III subunits gamma and tau0869
NC_014933:270000:2855972855972874321836Bacteroides helcogenes P 36-108 chromosome, complete genomeDNA polymerase III, tau subunit3e-1377
NC_015496:3256372:3256372325637232582761905Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeDNA polymerase III, subunits gamma and tau6e-1272.4
NC_013123:78786:9316193161942041044Candidatus Sulcia muelleri SMDSEM, complete genomeN terminal region of DNA polymerase III, gamma subunit9e-1272
NC_014499:87528:9889898898999411044Candidatus Sulcia muelleri CARI chromosome, complete genomeDNA polymerase III subunit gamma2e-1170.9
NC_010381:35408:455394553946411873Lysinibacillus sphaericus C3-41 plasmid pBsph, complete sequenceDNA polymerase III subunit delta'3e-1170.1
NC_010830:384812:3865683865683884571890Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein2e-1067.4
NC_017243:3141500:3143225314322531448021578Brachyspira intermedia PWS/A chromosome, complete genomeDNA polymerase III subunits gamma and tau3e-1066.6
NC_012225:2198987:2213988221398822155711584Brachyspira hyodysenteriae WA1, complete genomeDNA polymerase III, gamma and tau subunits3e-1066.6
NC_013316:1:2023020230218671638Clostridium difficile R20291, complete genomeDNA polymerase III subunit gamma/tau3e-1066.6
NC_009089:1:2047020470221071638Clostridium difficile 630, complete genomeDNA polymerase III subunit gamma/tau3e-1066.6
NC_018604:2579000:2579067257906725806321566Brachyspira pilosicoli WesB complete genomeDNA polymerase III subunits gamma and tau1e-0964.7
NC_014330:1113145:1113854111385411154191566Brachyspira pilosicoli 95/1000 chromosome, complete genomeDNA polymerase III subunits gamma and tau1e-0964.7
NC_019908:2068631:2101961210196121035261566Brachyspira pilosicoli P43/6/78 chromosome, complete genomeDNA polymerase III subunits gamma and tau1e-0964.7
NC_012654:92487:9575695756971741419Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequenceDNA polymerase III, subunits gamma and tau3e-0963.5
NC_010418:138325:1383251383251397401416Clostridium botulinum A3 str. Loch Maree plasmid pCLK, completeDNA polymerase III, subunits gamma and tau3e-0963.5
NC_010379:6880:8417841798351419Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequenceDNA polymerase III, subunits gamma and tau4e-0963.2
NC_010381:35408:4359843598455081911Lysinibacillus sphaericus C3-41 plasmid pBsph, complete sequenceDNA polymerase III subunit gamma/tau7e-0962.4
NC_013450:448054:4637154637154654121698Staphylococcus aureus subsp. aureus ED98, complete genomeDNA polymerase III, gamma and tau subunits7e-0962.4
NC_017337:498688:5143495143495160461698Staphylococcus aureus subsp. aureus ED133 chromosome, completeDNA polymerase III subunits gamma and tau7e-0962.4
NC_017338:470993:4860024860024876991698Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeDNA-directed DNA polymerase III subunit gamma and tau7e-0962.4
NC_002745:487500:5025945025945042911698Staphylococcus aureus subsp. aureus N315, complete genomeDNA polymerase III gamma and tau subunits7e-0962.4
NC_002758:511247:5269085269085286051698Staphylococcus aureus subsp. aureus Mu50, complete genomeDNA polymerase III gamma and tau subunits7e-0962.4
NC_009487:522193:5378545378545395511698Staphylococcus aureus subsp. aureus JH9 chromosome, completeDNA polymerase III subunits gamma and tau7e-0962.4
NC_009632:522264:5379255379255396221698Staphylococcus aureus subsp. aureus JH1 chromosome, completeDNA polymerase III subunits gamma and tau7e-0962.4
NC_012121:113912:1184171184171201681752Staphylococcus carnosus subsp. carnosus TM300, complete genomeDNA polymerase III gamma and tau subunits9e-0962
NC_002952:494500:5105575105575122541698Staphylococcus aureus subsp. aureus MRSA252, complete genomeDNA polymerase III, tau subunit7e-0962
NC_003923:473743:4879734879734896701698Staphylococcus aureus subsp. aureus MW2, complete genomeDNA polymerase III gamma and tau subunits2e-0861.2
NC_017079:2243451:2246343224634322480161674Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomeDNA polymerase III subunit gamma and tau2e-0860.8
NC_021182:93000:9652896528981561629Clostridium pasteurianum BC1, complete genomeDNA polymerase III, subunit gamma/tau3e-0860.5
NC_017208:1:2539825398270861689Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeDNA polymerase III subunits gamma and tau2e-0860.5
NC_014171:1:2570125701273081608Bacillus thuringiensis BMB171 chromosome, complete genomeDNA polymerase III subunits gamma and tau2e-0860.5
NC_019978:39000:4065540655423311677Halobacteroides halobius DSM 5150, complete genomeDNA polymerase III, subunit gamma/tau2e-0860.5
NC_014314:576465:6644416644416654601020Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeDNA-directed DNA polymerase subunit delta'3e-0860.1
NC_009495:38000:3809538095397201626Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeDNA polymerase III subunits gamma and tau3e-0860.1
NC_009697:38000:3811038110397351626Clostridium botulinum A str. ATCC 19397 chromosome, completeDNA polymerase III subunits gamma and tau3e-0860.1
NC_009698:38000:3811038110397351626Clostridium botulinum A str. Hall chromosome, complete genomeDNA polymerase III subunits gamma and tau3e-0860.1
NC_009699:33452:3345233452350771626Clostridium botulinum F str. Langeland chromosome, complete genomeDNA polymerase III subunits gamma and tau3e-0860.1
NC_017297:33519:3351933519351441626Clostridium botulinum F str. 230613 chromosome, complete genomeDNA polymerase III subunits gamma/tau3e-0860.1
NC_008346:36176:3617636176376751500Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeDNA-directed DNA polymerase3e-0860.1
NC_013949:1163456:1181764118176411835211758Helicobacter mustelae 12198 chromosome, complete genomeDNA polymerase III subunit gamma3e-0860.1
NC_018748:1400068:1406261140626114073611101Emticicia oligotrophica DSM 17448 chromosome, complete genomeDNA polymerase III gamma/tau subunits-like protein5e-0859.3
NC_014219:25845:3195931959337611803Bacillus selenitireducens MLS10 chromosome, complete genomeDNA polymerase III, subunits gamma and tau5e-0859.3
NC_014387:281157:2842162842162858171602Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeDNA polymerase III gamma and tau subunits DnaX19e-0858.5
NC_014355:243543:2472142472142490911878Candidatus Nitrospira defluvii, complete genomeDNA polymerase III subunit gamma/tau1e-0758.2
NC_007776:1340741:1366407136640713687462340Synechococcus sp. JA-2-3B'a(2-13), complete genomeDNA polymerase III, subunits gamma and tau2e-0757.8
NC_017075:2733898:2750746275074627517651020Rubrivivax gelatinosus IL144, complete genomeDNA polymerase III delta' subunit HolB2e-0757.4
NC_014721:508000:5149125149125165161605Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeDNA polymerase iii, subunits gamma and tau2e-0757.4
NC_015737:981712:9965819965819981611581Clostridium sp. SY8519, complete genomehypothetical protein3e-0757
NC_014376:189319:1893191893191909141596Clostridium saccharolyticum WM1 chromosome, complete genomeDNA polymerase III, subunits gamma and tau2e-0757
NC_015949:1957185:1972051197205119736611611Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeDNA polymerase III subunits gamma and tau2e-0757
NC_016893:218376:2227162227162238071092Wigglesworthia glossinidia endosymbiont of Glossina morsitansDNA polymerase III subunits gamma and tau3e-0756.6
NC_010321:2207364:220972322097232210697975Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeDNA polymerase III subunit delta'4e-0756.2
NC_013520:1860286:1866713186671318694002688Veillonella parvula DSM 2008, complete genomeDNA polymerase III, subunits gamma and tau4e-0756.2
NC_011025:134292:1514611514611534041944Mycoplasma arthritidis 158L3-1, complete genomeDNA polymerase III subunits gamma and tau4e-0756.2
NC_015555:49842:898208982090779960Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeDNA polymerase III, delta prime subunit5e-0755.8
NC_012988:2455807:2456221245622124581011881Methylobacterium extorquens DM4, complete genomeDNA polymerase III, tau and subunit gammas8e-0755.5
NC_006055:769418:7876507876507895451896Mesoplasma florum L1, complete genomeDNA polymerase III gamma and tau subunits7e-0755.5
NC_015555:49842:5411154111557031593Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeDNA polymerase III, subunits gamma and tau7e-0755.5
NC_010172:2082000:2082448208244820843341887Methylobacterium extorquens PA1, complete genomeDNA polymerase III, subunits gamma and tau9e-0755.1
NC_011567:1:2557225572272511680Anoxybacillus flavithermus WK1, complete genomeDNA polymerase III tau subunit9e-0755.1
NC_006177:12383:1624916249179611713Symbiobacterium thermophilum IAM 14863, complete genomeDNA polymerase III gamma and tau subunits1e-0655.1
NC_013939:148706:1487061487061502861581Deferribacter desulfuricans SSM1, complete genomeDNA polymerase III gamma/tau subunits1e-0655.1
NC_008536:3988520:4008884400888440105901707Solibacter usitatus Ellin6076, complete genomeDNA polymerase III, subunits gamma and tau1e-0655.1
NC_014654:391201:3963813963813981891809Halanaerobium sp. 'sapolanicus' chromosome, complete genomeDNA polymerase III, subunits gamma and tau1e-0654.7
NC_006177:3457637:347597534759753476973999Symbiobacterium thermophilum IAM 14863, complete genomeDNA polymerase III delta' subunit2e-0654.3
NC_009437:1481064:1487849148784914894561608Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeDNA polymerase III, subunits gamma and tau2e-0654.3
NC_010424:14657:3914239142404851344Candidatus Desulforudis audaxviator MP104C, complete genomeDNA polymerase III, subunits gamma and tau2e-0653.9
NC_014752:1363562:1372436137243613745682133Neisseria lactamica ST-640, complete genomeDNA polymerase III tau and gamma chains2e-0653.9
NC_009925:2264858:2287901228790122899672067Acaryochloris marina MBIC11017, complete genomeDNA polymerase III gamma and tau subunits3e-0653.5
NC_015738:873653:8863658863658886412277Eggerthella sp. YY7918, complete genomeDNA polymerase III3e-0653.5
NC_012039:412837:4470934470934486251533Campylobacter lari RM2100, complete genomeDNA polymerase III, gamma and tau subunits3e-0653.5
NC_007503:2338110:2373573237357323751081536Carboxydothermus hydrogenoformans Z-2901, complete genomeputative DNA polymerase III, gamma/tau subunits3e-0653.5
NC_010103:936250:9554719554719565531083Brucella canis ATCC 23365 chromosome I, complete sequenceDNA polymerase III, delta' subunit3e-0653.1
NC_004310:937800:9570219570219581031083Brucella suis 1330 chromosome I, complete sequenceDNA polymerase III subunit delta3e-0653.1
NC_016795:1441024:1441024144102414421061083Brucella abortus A13334 chromosome 1, complete sequenceDNA polymerase III subunit delta3e-0653.1
NC_006932:956805:9760219760219771031083Brucella abortus biovar 1 str. 9-941 chromosome I, completeDNA polymerase III subunit delta3e-0653.1
NC_010742:955104:9743209743209754021083Brucella abortus S19 chromosome 1, complete sequenceReplication factor C conserved domain protein3e-0653.1
NC_007618:955000:9731419731419742231083Brucella melitensis biovar Abortus 2308 chromosome I, completeReplication factor C conserved domain3e-0653.1
NC_014171:1:369183691837901984Bacillus thuringiensis BMB171 chromosome, complete genomeDNA polymerase III subunit delta'4e-0653.1
NC_017167:129988:1318871318871336441758Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1DNA polymerase III subunits gamma and tau4e-0653.1
NC_015857:963570:9827899827899838711083Brucella pinnipedialis B2/94 chromosome chromosome 1, completeDNA polymerase III subunit delta'3e-0653.1
NC_003317:1030220:1030220103022010313021083Brucella melitensis 16M chromosome I, complete sequenceDNA polymerase III subunit delta3e-0653.1
NC_010169:957565:9767859767859778671083Brucella suis ATCC 23445 chromosome I, complete sequenceDNA polymerase III, delta' subunit3e-0653.1
NC_017251:937786:9570079570079580891083Brucella suis 1330 chromosome I, complete genomeDNA polymerase III subunit delta'3e-0653.1
NC_017248:953131:9722189722189733001083Brucella melitensis NI chromosome chromosome I, complete sequenceDNA polymerase III subunit delta'3e-0653.1
NC_017246:956868:9760989760989771801083Brucella melitensis M5-90 chromosome chromosome I, completeDNA polymerase III subunit delta'3e-0653.1
NC_017244:956554:9757859757859768671083Brucella melitensis M28 chromosome chromosome 1, complete sequenceDNA polymerase III subunit delta'3e-0653.1
NC_016797:937753:9569749569749580561083Brucella suis VBI22 chromosome I, complete sequenceDNA polymerase III subunit delta'3e-0653.1
NC_016778:96792:9679296792978741083Brucella canis HSK A52141 chromosome 1, complete sequenceDNA polymerase III subunit delta'3e-0653.1
NC_013119:942079:9612999612999623811083Brucella microti CCM 4915 chromosome 1, complete sequenceDNA polymerase III subunit delta'3e-0653.1
NC_012441:956609:9758299758299769111083Brucella melitensis ATCC 23457 chromosome I, complete sequenceDNA polymerase III subunit delta'3e-0653.1
NC_013921:36000:4033940339418861548Thermoanaerobacter italicus Ab9 chromosome, complete genomeDNA polymerase III, subunits gamma and tau9e-0652
NC_014831:65408:6685766857693342478Thermaerobacter marianensis DSM 12885 chromosome, complete genomeDNA polymerase III, subunits gamma and tau1e-0551.6