Pre_GI: BLASTP Hits

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Query: NC_013929:4927380:4940025 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 4940025, End: 4940915, Length: 891

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008554:2308500:232728923272892328215927Syntrophobacter fumaroxidans MPOB, complete genometranscriptional regulator, LysR family3e-22105
NC_016641:4290350:429276142927614293657897Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional regulator ywqm9e-22104
NC_020272:430500:444222444222445103882Bacillus amyloliquefaciens IT-45, complete genomeLysR family transcriptional regulator1e-1687
NC_013406:3975512:398048739804873981392906Paenibacillus sp. Y412MC10 chromosome, complete genomeLysR family transcriptional regulator2e-1687
NC_016935:1636278:173025017302501731134885Paenibacillus mucilaginosus 3016 chromosome, complete genomeLysR family transcriptional regulator1e-1584.3
NC_021182:3771523:379288937928893793779891Clostridium pasteurianum BC1, complete genometranscriptional regulator1e-1584.3
NC_015690:1109335:116494511649451165829885Paenibacillus mucilaginosus KNP414 chromosome, complete genomeLysR family transcriptional regulator1e-1584.3
NC_012881:3520956:354014435401443541031888Desulfovibrio salexigens DSM 2638, complete genometranscriptional regulator, LysR family3e-1479.3
NC_020410:2509057:252344325234432524342900Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative transcriptional regulator (LysR family)7e-1478.2
NC_020244:4020315:402223740222374023124888Bacillus subtilis XF-1, complete genomehypothetical protein7e-1478.2
NC_015660:1869962:188570818857081886592885Geobacillus thermoglucosidasius C56-YS93 chromosome, completeLysR family transcriptional regulator1e-1377.4
NC_014103:3212839:322559732255973226466870Bacillus megaterium DSM319 chromosome, complete genomeLysR family transcriptional regulator1e-1377
NC_017138:1812000:181511518151151815984870Bacillus megaterium WSH-002 chromosome, complete genomeHTH-type transcriptional regulator GltR2e-1376.3
NC_014650:1862165:186839718683971869281885Geobacillus sp. Y4.1MC1 chromosome, complete genomeLysR family transcriptional regulator4e-1375.5
NC_016641:2291363:229800722980072298885879Paenibacillus terrae HPL-003 chromosome, complete genomeLysR family transcriptional regulator2e-1273.6
NC_020244:2509000:254053025405302541426897Bacillus subtilis XF-1, complete genomeLysR family transcriptional regulator2e-1273.6
NC_019896:1483073:150020115002011501049849Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeLysR family transcriptional regulator1e-1273.6
NC_020410:3868573:386996738699673870845879Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completePredicted HTH-type Transcriptional regulator8e-1271.2
NC_015565:348941:350352350352351260909Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeLysR family transcriptional regulator1e-1170.9
NC_013235:5127148:512885151288515129720870Nakamurella multipartita DSM 44233, complete genometranscriptional regulator, LysR family3e-1169.3
NC_014828:1632000:164093116409311641830900Ethanoligenens harbinense YUAN-3 chromosome, complete genometranscriptional regulator, LysR family5e-1168.6
NC_016629:2449731:246234124623412463234894Desulfovibrio africanus str. Walvis Bay chromosome, completetranscriptional regulator, LysR family5e-1168.6
NC_006322:567987:585528585528586409882Bacillus licheniformis ATCC 14580, complete genomehypothetical protein8e-1167.8
NC_006270:568171:585738585738586619882Bacillus licheniformis ATCC 14580, complete genomeputative regulatory protein8e-1167.8
NC_019940:2893535:291169629116962912598903Thioflavicoccus mobilis 8321 chromosome, complete genometranscriptional regulator1e-1067
NC_015136:912276:926116926116927021906Burkholderia sp. CCGE1001 chromosome 1, complete sequenceLysR family transcriptional regulator2e-1066.6
NC_013595:4796436:482543748254374826318882Streptosporangium roseum DSM 43021, complete genometranscriptional regulator, LysR family3e-1065.9
NC_016943:4194002:423788442378844238843960Blastococcus saxobsidens DD2, complete genomeLysR family transcriptional regulator3e-1065.9
NC_015138:2025000:204546920454692046365897Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeLysR family transcriptional regulator1e-0964.3
UCMB5137:2418403:243387124338712434752882Bacillus atrophaeus UCMB-5137LysR family transcriptional regulator1e-0963.9
NC_014639:2452286:246790124679012468782882Bacillus atrophaeus 1942 chromosome, complete genomeLysR family transcriptional regulator1e-0963.9
CP002207:2452286:246790124679012468782882Bacillus atrophaeus 1942, complete genomeLysR family transcriptional regulator1e-0963.9
NC_016641:373623:397775397775398656882Paenibacillus terrae HPL-003 chromosome, complete genomeHTH-type transcriptional regulator GltR2e-0963.2
NC_014622:5315500:534063653406365341493858Paenibacillus polymyxa SC2 chromosome, complete genometranscriptional regulator3e-0962.8
NC_009439:442890:484747484747485631885Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator3e-0962.8
NC_013411:2236166:225897722589772259885909Geobacillus sp. Y412MC61, complete genometranscriptional regulator, LysR family5e-0962
NC_014915:1376035:139892113989211399829909Geobacillus sp. Y412MC52 chromosome, complete genometranscriptional regulator, LysR family5e-0962
NC_006510:1446490:146725614672561468167912Geobacillus kaustophilus HTA426, complete genometranscription activator of glutamate synthase(LysR family)4e-0962
NC_016593:1527456:154935815493581550269912Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completetranscriptional regulator, LysR4e-0962
NC_013446:2623528:264278126427812643671891Comamonas testosteroni CNB-2, complete genomeputative LysR-family transcriptional regulator7e-0961.2
NC_012660:4734363:474605447460544746950897Pseudomonas fluorescens SBW25 chromosome, complete genomeLysR family transcriptional regulator1e-0860.5
NC_008537:12500:134141341414367954Arthrobacter sp. FB24 plasmid 1, complete sequencetranscriptional regulator, LysR family2e-0860.1
NC_019673:1420198:143785814378581438763906Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, LysR family2e-0860.1
NC_008313:3456741:346156634615663462534969Ralstonia eutropha H16 chromosome 1, complete sequencetranscriptional regulator, LysR-family2e-0859.7
NC_011662:131956:148443148443149357915Thauera sp. MZ1T, complete genometranscriptional regulator, LysR family3e-0859.3
NC_019896:1483073:150395815039581504824867Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeLysR family transcription regulator YrdQ5e-0858.9
NC_020244:2509000:253644425364442537310867Bacillus subtilis XF-1, complete genomeputative transcriptional regulator (LysR family)4e-0858.9
NC_000964:2702376:272100427210042721870867Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein4e-0858.9
NC_018080:4280401:430315243031524304054903Pseudomonas aeruginosa DK2 chromosome, complete genometranscriptional regulator4e-0858.9
NC_002516:1236644:123664412366441237546903Pseudomonas aeruginosa PAO1, complete genomeprobable transcriptional regulator4e-0858.9
NC_014972:480355:480355480355481275921Desulfobulbus propionicus DSM 2032 chromosome, complete genomeLysR family transcriptional regulator4e-0858.9
NC_008463:4389721:441238644123864413288903Pseudomonas aeruginosa UCBPP-PA14, complete genomeprobable transcriptional regulator4e-0858.9
NC_014551:2057971:205797120579712058873903Bacillus amyloliquefaciens DSM 7, complete genometranscriptional regulator (LysR family)7e-0858.2
NC_017190:2002718:200271820027182003635918Bacillus amyloliquefaciens LL3 chromosome, complete genomeLysR family transcriptional regulator7e-0858.2
NC_012214:1650523:167376816737681674724957Erwinia pyrifoliae Ep1/96, complete genomeTranscriptional regulator cys regulon8e-0858.2
NC_011283:1901229:190437519043751905256882Klebsiella pneumoniae 342 chromosome, complete genomeLysR family transcriptional regulator8e-0857.8
NC_008148:1567703:157249215724921573409918Rubrobacter xylanophilus DSM 9941, complete genometranscriptional regulator, LysR family1e-0757.4
NC_004113:1234048:1250682125068212517221041Thermosynechococcus elongatus BP-1, complete genomeLysR family transcriptional regulator1e-0757.4
NC_011283:1811000:186656418665641867484921Klebsiella pneumoniae 342 chromosome, complete genomeLysR family transcriptional regulator1e-0757.4
NC_013730:5914142:593181359318135932709897Spirosoma linguale DSM 74, complete genometranscriptional regulator, LysR family1e-0757
NC_016109:4241591:426399042639904264961972Kitasatospora setae KM-6054, complete genomeputative LysR family transcriptional regulator2e-0756.6
NC_015726:3280000:328530332853033286241939Cupriavidus necator N-1 chromosome 1, complete sequenceLysR family transcriptional regulator2e-0756.6
NC_011283:4767269:478157247815724782510939Klebsiella pneumoniae 342 chromosome, complete genomeLysR family transcriptional regulator3e-0756.2
NC_013850:4612812:462711546271154628053939Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, LysR family3e-0756.2
NC_005810:3493607:349270734927073493624918Yersinia pestis biovar Microtus str. 91001, complete genomeDNA-binding transcriptional regulator OxyR3e-0756.2
NC_012121:113912:115096115096116004909Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative transcriptional regulator of LysR type2e-0756.2
NC_014650:2417509:242372524237252424627903Geobacillus sp. Y4.1MC1 chromosome, complete genomeLysR family transcriptional regulator3e-0755.8
NC_008027:2331617:235443923544392355356918Pseudomonas entomophila L48, complete genometranscriptional regulator, LysR family4e-0755.8
NC_011740:3739395:374897037489703749938969Escherichia fergusonii ATCC 35469, complete genomePutative HTH-type transcriptional regulator (ybhD)4e-0755.5
NC_004722:5057825:507269450726945073593900Bacillus cereus ATCC 14579, complete genomeTranscriptional regulators, LysR family5e-0755.5
NC_017208:5124333:514119951411995142092894Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeLysR family transcriptional regulator5e-0755.5
NC_014375:1242750:125601912560191256897879Brevundimonas subvibrioides ATCC 15264 chromosome, complete genometranscriptional regulator, LysR family6e-0755.1
NC_009648:4656187:465528746552874656204918Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeDNA-binding transcriptional regulator OxyR6e-0755.1
NC_012660:2045398:207139720713972072293897Pseudomonas fluorescens SBW25 chromosome, complete genomeputative LysR family regulatory protein5e-0755.1
NC_013947:1956923:196952919695291970404876Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, LysR family7e-0754.7
NC_017297:3939328:394053539405353941440906Clostridium botulinum F str. 230613 chromosome, complete genomeLysR family transcriptional regulator8e-0754.7
NC_009699:3940984:394219139421913943096906Clostridium botulinum F str. Langeland chromosome, complete genomeLysR family transcriptional regulator8e-0754.7
NC_003198:3586000:360720436072043608121918Salmonella enterica subsp. enterica serovar Typhi str. CT18,hydrogen peroxide-inducible regulon activator9e-0754.7
NC_009778:1717458:175198417519841752856873Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-0654.3
NC_014659:3654979:367281136728113673713903Rhodococcus equi 103S, complete genomeLysR family transcriptional regulator9e-0754.3
NC_008699:2294361:230129423012942302250957Nocardioides sp. JS614, complete genomeLysR, substrate-binding9e-0754.3
NC_015563:313283:314588314588315505918Delftia sp. Cs1-4 chromosome, complete genomeLysR family transcriptional regulator9e-0754.3
NC_015733:1398083:142031714203171421243927Pseudomonas putida S16 chromosome, complete genomeLysR family transcriptional regulator1e-0653.9
NC_004578:5192110:520788752078875208783897Pseudomonas syringae pv. tomato str. DC3000, complete genometranscriptional regulator, LysR family2e-0653.5
NC_011662:2320100:233568923356892336609921Thauera sp. MZ1T, complete genometranscriptional regulator, LysR family2e-0653.5
NC_011992:3752867:375996937599693760883915Acidovorax ebreus TPSY, complete genometranscriptional regulator, LysR family2e-0653.5
NC_014659:3654979:367607236760723676965894Rhodococcus equi 103S, complete genomeLysR family transcriptional regulator2e-0653.5
NC_017030:2728175:274143727414372742321885Corallococcus coralloides DSM 2259 chromosome, complete genomeLysR family transcriptional regulator2e-0653.1
NC_008095:2450500:246221424622142463125912Myxococcus xanthus DK 1622, complete genometranscriptional activator, LysR family2e-0653.1
NC_008781:2883968:290409629040962905004909Polaromonas naphthalenivorans CJ2, complete genometranscriptional regulator, LysR family2e-0653.1
NC_013223:2337049:233808223380822338996915Desulfohalobium retbaense DSM 5692, complete genometranscriptional regulator, LysR family2e-0653.1
NC_015379:4630367:463216946321694633083915Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, LysR family3e-0652.8
NC_010551:1462827:147469114746911475605915Burkholderia ambifaria MC40-6 chromosome 1, complete sequencetranscriptional regulator, LysR family3e-0652.8
NC_008825:2063990:208207720820772083030954Methylibium petroleiphilum PM1, complete genomecys regulon transcriptional activator3e-0652.8
NC_014910:2930860:293798729379872938913927Alicycliphilus denitrificans BC chromosome, complete genomelysr substrate-binding protein3e-0652.8
NC_008497:2038612:205063220506322051540909Lactobacillus brevis ATCC 367, complete genomeTranscriptional regulator3e-0652.8
NC_007005:1636875:1667185166718516682281044Pseudomonas syringae pv. syringae B728a, complete genomeregulatory protein, LysR:LysR, substrate-binding3e-0652.8
NC_010943:1332243:133691113369111337804894Stenotrophomonas maltophilia K279a, complete genomeputative LysR family transcriptional regulator4e-0652.4
NC_010338:4148667:415683341568334157816984Caulobacter sp. K31, complete genometranscriptional regulator, LysR family4e-0652.4
NC_010320:143109:145277145277146167891Thermoanaerobacter sp. X514 chromosome, complete genomeLysR family transcriptional regulator4e-0652.4
NC_003295:2787371:279455227945522795496945Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSCRIPTION REGULATOR PROTEIN4e-0652.4
NC_009720:2945655:295186329518632952804942Xanthobacter autotrophicus Py2, complete genomeLysR family transcriptional regulator4e-0652.4
NC_009720:251703:269508269508270449942Xanthobacter autotrophicus Py2, complete genomeLysR family transcriptional regulator4e-0652.4
NC_011000:2732330:279013927901392791041903Burkholderia cenocepacia J2315 chromosome 1, complete sequenceLysR family regulatory protein4e-0652.4
NC_016830:2642881:265919626591962660062867Pseudomonas fluorescens F113 chromosome, complete genomeLysR family transcriptional regulator4e-0652.4
NC_005835:1773482:177348217734821774435954Thermus thermophilus HB27, complete genometranscriptional regulatory protein, lysR family (hydrogen peroxide-inducible genes activator)5e-0652
NC_011894:6888562:691884769188476919731885Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, LysR family5e-0652
NC_016943:3270308:328229232822923283251960Blastococcus saxobsidens DD2, complete genomeLysR family transcriptional regulator5e-0652
NC_012791:2233098:223494622349462235842897Variovorax paradoxus S110 chromosome 1, complete genometranscriptional regulator, LysR family4e-0652
NC_013406:1145268:116005811600581160912855Paenibacillus sp. Y412MC10 chromosome, complete genomeLysR family transcriptional regulator6e-0651.6
NC_008577:1489643:148964314896431490584942Shewanella sp. ANA-3 chromosome 1, complete sequencetranscriptional regulator, LysR family7e-0651.6
NC_015556:2265940:227657922765792277505927Pseudomonas fulva 12-X chromosome, complete genometranscriptional regulator, LysR family7e-0651.6
NC_010086:871723:899395899395900306912Burkholderia multivorans ATCC 17616 chromosome 2, completetranscriptional regulator, LysR family8e-0651.2
NC_009092:4337617:435595543559554356827873Shewanella loihica PV-4, complete genometranscriptional regulator, LysR family8e-0651.2
NC_014910:242845:245815245815246708894Alicycliphilus denitrificans BC chromosome, complete genomelysr substrate-binding protein9e-0651.2