Pre_GI: BLASTP Hits

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Query: NC_013714:1463143:1479338 Bifidobacterium dentium Bd1, complete genome

Start: 1479338, End: 1480234, Length: 897

Host Lineage: Bifidobacterium dentium; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Common oral and gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium dentium species represents over forty strains which were isolated from human dental caries and human feces.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017219:2646157:268443226844322685307876Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein1e-27123
NC_011593:2650156:268843126884312689306876Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,AraC family transcriptional regulator1e-27123
NC_016641:3058571:307417930741793075060882Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional activator ramA3e-1582.8
NC_015977:577255:596051596051596920870Roseburia hominis A2-183 chromosome, complete genomexylan 1,4-beta-xylosidase2e-1480.1
NC_012778:1778654:178268317826831783558876Eubacterium eligens ATCC 27750, complete genomeAraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR1e-1377
NC_011898:1880960:189617918961791897009831Clostridium cellulolyticum H10, complete genometranscriptional regulator, AraC family2e-1377
NC_014484:1594396:159439615943961595358963Spirochaeta thermophila DSM 6192 chromosome, complete genometranscriptional regulatory protein2e-1273.6
NC_015690:6521740:654375765437576544740984Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator2e-1273.6
NC_016935:2347691:235173123517312352624894Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator2e-1273.2
NC_015690:1818333:182186118218611822754894Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator2e-1273.2
NC_015977:3215770:321577032157703216591822Roseburia hominis A2-183 chromosome, complete genomeAraC family transcriptional regulator7e-1271.6
NC_014654:1113116:1115573111557311171861614Halanaerobium sp. 'sapolanicus' chromosome, complete genometwo component transcriptional regulator, AraC family1e-1170.9
NC_015389:1977736:1999776199977620019802205Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, AraC family3e-1169.3
NC_013406:3521489:352296635229663523859894Paenibacillus sp. Y412MC10 chromosome, complete genomeAraC family transcriptional regulator7e-1168.2
NC_015385:2505977:252237725223772523315939Treponema succinifaciens DSM 2489 chromosome, complete genometranscriptional regulator with cupin sensor, AraC family8e-1168.2
NC_015514:3307199:3325492332549233280142523Cellulomonas fimi ATCC 484 chromosome, complete genomeAraC family transcriptional regulator1e-1067.8
NC_014933:901897:920312920312921136825Bacteroides helcogenes P 36-108 chromosome, complete genometranscriptional regulator, AraC family2e-1066.2
NC_014933:1759729:178259217825921783479888Bacteroides helcogenes P 36-108 chromosome, complete genometranscriptional regulator, AraC family3e-1065.9
NC_019897:1577015:157852915785291579446918Thermobacillus composti KWC4 chromosome, complete genomeDNA-binding domain-containing protein5e-1065.1
NC_016077:998741:100240210024021003331930Acidaminococcus intestini RyC-MR95 chromosome, complete genomehypothetical protein6e-1065.1
NC_017195:517344:538421538421539302882Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completetranscriptional regulator6e-1065.1
NC_015977:2280834:228921522892152290015801Roseburia hominis A2-183 chromosome, complete genometwo-component system response regulator YesN7e-1065.1
NC_015703:3880903:388524838852483886114867Runella slithyformis DSM 19594 chromosome, complete genomeAraC family transcriptional regulator1e-0963.9
NC_014720:154111:1959181959181974771560Caldicellulosiruptor kronotskyensis 2002 chromosome, completetwo component transcriptional regulator, arac family1e-0963.9
NC_009328:3322802:3356777335677733578771101Geobacillus thermodenitrificans NG80-2 chromosome, complete genomesugar ABC transporter permease1e-0963.9
NC_015703:5865921:589589958958995896768870Runella slithyformis DSM 19594 chromosome, complete genomeAraC family transcriptional regulator1e-0963.9
NC_015500:1204501:121575712157571216653897Treponema brennaborense DSM 12168 chromosome, complete genometranscriptional regulator, AraC family1e-0963.9
NC_009706:238160:241196241196242092897Clostridium kluyveri DSM 555 chromosome, complete genometranscriptional regulator1e-0963.9
NC_011837:238160:241196241196242092897Clostridium kluyveri NBRC 12016, complete genomehypothetical protein1e-0963.9
NC_016894:3935161:395103139510313951900870Acetobacterium woodii DSM 1030 chromosome, complete genomeAraC family transcriptional regulator2e-0963.2
NC_020134:1328302:132830213283021329168867Clostridium stercorarium subsp. stercorarium DSM 8532, completeAraC family HTH transcriptional regulator4e-0962.4
NC_014538:985339:9853399853399869311593Thermoanaerobacter sp. X513 chromosome, complete genomeAraC family two component transcriptional regulator3e-0962.4
NC_010320:1949852:1967413196741319690051593Thermoanaerobacter sp. X514 chromosome, complete genomeresponse regulator receiver protein3e-0962.4
NC_014923:2439197:245279324527932453665873Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completehelix-turn-helix- domain containing protein AraC type5e-0962
NC_015690:1772015:179601417960141796901888Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator1e-0860.8
NC_012590:2501593:2513772251377225150101239Corynebacterium aurimucosum ATCC 700975, complete genomeHTH-type transcriptional regulator1e-0860.8
NC_016935:2302055:232616123261612327048888Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator1e-0860.8
NC_016048:1390463:141590514159051416759855Oscillibacter valericigenes Sjm18-20, complete genomeputative AraC family transcriptional regulator2e-0860.5
NC_013282:3216226:322395232239523224848897Cronobacter turicensis, complete genomehypothetical protein2e-0860.1
NC_014008:669170:679249679249680019771Coraliomargarita akajimensis DSM 45221 chromosome, complete genometranscriptional regulator, AraC family2e-0860.1
NC_017047:1934430:1949107194910719501201014Rahnella aquatilis HX2 chromosome, complete genometranscriptional activator FtrA2e-0860.1
NC_013406:3874157:388727238872723888165894Paenibacillus sp. Y412MC10 chromosome, complete genomeAraC family transcriptional regulator2e-0860.1
NC_008054:245184:259794259794260588795Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeTranscriptional regulator (AraC family)2e-0859.7
NC_016609:4331359:433606443360644336966903Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator2e-0859.7
NC_015164:1952500:197383319738331974720888Bacteroides salanitronis DSM 18170 chromosome, complete genometranscriptional regulator, AraC family3e-0859.7
NC_015737:449914:4499144499144523582445Clostridium sp. SY8519, complete genomebeta-xylosidase3e-0859.3
NC_012914:5618000:562146656214665622317852Paenibacillus sp. JDR-2, complete genometranscriptional regulator, AraC family3e-0859.3
NC_014387:1106901:1109866110986611109211056Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeAraC family transcriptional regulator3e-0859.3
NC_018720:627642:644875644875645729855Bifidobacterium asteroides PRL2011 chromosome, complete genometranscriptional regulator, AraC family3e-0859.3
NC_011283:3177350:3177350317735031796832334Klebsiella pneumoniae 342 chromosome, complete genomeAraC family transcriptional regulator4e-0858.9
NC_016818:1963875:1976077197607719770901014Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completetranscriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain4e-0858.9
NC_011894:2385834:238993223899322390918987Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, AraC family5e-0858.9
NC_013406:3851877:3863480386348038649041425Paenibacillus sp. Y412MC10 chromosome, complete genometwo component AraC family transcriptional regulator6e-0858.5
NC_014328:4316008:432013243201324320902771Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative response regulator5e-0858.5
NC_009922:2556033:258372525837252584486762Alkaliphilus oremlandii OhILAs, complete genometwo component transcriptional regulator, AraC family5e-0858.5
NC_010001:4730000:473538047353804736159780Clostridium phytofermentans ISDg, complete genometwo component transcriptional regulator, AraC family7e-0858.2
NC_013730:4857090:486204248620424862953912Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family8e-0858.2
NC_013216:426877:439141439141440076936Desulfotomaculum acetoxidans DSM 771, complete genometranscriptional regulator, AraC family1e-0757.8
NC_015723:280368:291558291558292412855Cupriavidus necator N-1 chromosome 2, complete sequenceAraC family transcriptional regulator1e-0757.4
NC_012491:6143928:6150289615028961514821194Brevibacillus brevis NBRC 100599, complete genomeprobable two-component response regulator1e-0757.4
NC_020181:929000:9561779561779584742298Enterobacter aerogenes EA1509E, complete genomeFIG00731846: hypothetical protein1e-0757.4
NC_019904:1616742:163662016366201637615996Echinicola vietnamensis DSM 17526 chromosome, complete genometranscriptional regulator1e-0757.4
NC_019897:3251639:3253455325345532550831629Thermobacillus composti KWC4 chromosome, complete genomeresponse regulator containing CheY-like receiver domain and AraC-type DNA-binding domain1e-0757
NC_014366:1663034:1664567166456716656041038Gamma proteobacterium HdN1, complete genometranscriptional regulator, AraC family2e-0757
NC_013406:3583474:3617746361774636191881443Paenibacillus sp. Y412MC10 chromosome, complete genometwo component AraC family transcriptional regulator2e-0757
NC_015690:1542061:156474015647401565588849Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator2e-0757
NC_007907:5428247:543303054330305433782753Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0756.6
NC_014328:1286407:128640712864071287153747Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative response regulator2e-0756.6
NC_012914:5225609:522799552279955228879885Paenibacillus sp. JDR-2, complete genometranscriptional regulator, AraC family2e-0756.6
NC_016935:2069562:209206820920682092916849Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator2e-0756.6
NC_013037:2305585:232210223221022322971870Dyadobacter fermentans DSM 18053, complete genometranscriptional regulator, AraC family3e-0756.2
NC_019897:1577015:1595223159522315967851563Thermobacillus composti KWC4 chromosome, complete genomeresponse regulator containing CheY-like receiver domain and AraC-type DNA-binding domain3e-0756.2
NC_012881:1062629:106437510643751065232858Desulfovibrio salexigens DSM 2638, complete genometranscriptional regulator, AraC family3e-0755.8
NC_016631:6081384:609364760936476094531885Granulicella mallensis MP5ACTX8 chromosome, complete genomeAraC family transcriptional regulator3e-0755.8
NC_015732:3105649:310866331086633109505843Spirochaeta caldaria DSM 7334 chromosome, complete genomeAraC family transcriptional regulator5e-0755.5
NC_015312:848403:857726857726858697972Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeAraC family transcriptional regulator4e-0755.5
NC_014933:318255:324520324520325407888Bacteroides helcogenes P 36-108 chromosome, complete genometranscriptional regulator, AraC family4e-0755.5
NC_008751:607209:607209607209608048840Desulfovibrio vulgaris subsp. vulgaris DP4, complete genometranscriptional regulator, AraC family6e-0755.1
NC_020291:1045058:1049931104993110514631533Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometwo component transcriptional regulator, AraC family6e-0755.1
NC_010001:986500:9958119958119968781068Clostridium phytofermentans ISDg, complete genometwo component transcriptional regulator, AraC family7e-0754.7
NC_015690:4592582:4614154461415446153981245Paenibacillus mucilaginosus KNP414 chromosome, complete genometwo component AraC family transcriptional regulator8e-0754.7
NC_011830:4234392:423728342372834238158876Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, AraC family9e-0754.7
NC_015703:3842144:386086838608683861758891Runella slithyformis DSM 19594 chromosome, complete genomeAraC family transcriptional regulator1e-0654.3
NC_013406:5954472:5956693595669359579341242Paenibacillus sp. Y412MC10 chromosome, complete genomeAraC family transcriptional regulator1e-0654.3
NC_014963:2759978:277130727713072772194888Terriglobus saanensis SP1PR4 chromosome, complete genomeAraC family transcriptional regulator1e-0654.3
NC_020134:2832857:2831257283125728328791623Clostridium stercorarium subsp. stercorarium DSM 8532, completeTwo component transcriptional regulator, AraC family1e-0654.3
NC_004369:531579:558983558983559948966Corynebacterium efficiens YS-314, complete genomehypothetical protein1e-0653.9
NC_014624:3463272:3467956346795634692181263Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein1e-0653.9
NC_015519:2605709:2605709260570926077422034Tepidanaerobacter sp. Re1 chromosome, complete genomeAraC family transcriptional regulator1e-0653.9
NC_011593:1830500:184190718419071842767861Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,transcription activator, effector binding1e-0653.9
NC_017218:1166844:117820011782001179060861Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomebacterial transcription activator, effector-binding domain protein1e-0653.9
NC_017219:1830353:184169718416971842557861Bifidobacterium longum subsp. infantis ATCC 15697, complete genometranscriptional regulator1e-0653.9
NC_015737:1931541:1936628193662819382321605Clostridium sp. SY8519, complete genomehypothetical protein1e-0653.9
NC_021184:3149000:316585831658583166829972Desulfotomaculum gibsoniae DSM 7213, complete genomeresponse regulator containing CheY-like receiver domain and AraC-type DNA-binding domain2e-0653.5
NC_016935:2918689:2941139294113929427611623Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein2e-0653.5
NC_012997:2941627:2955731295573129567531023Teredinibacter turnerae T7901, complete genometranscriptional regulator, AraC family2e-0653.5
NC_011898:3973627:399000039900003990797798Clostridium cellulolyticum H10, complete genometranscriptional regulator, AraC family2e-0653.5
NC_015690:3269000:327450832745083275440933Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator2e-0653.1
NC_015379:5002595:500754250075425008411870Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative response regulator, YesN family2e-0653.1
NC_016935:3819500:382494838249483825880933Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator2e-0653.1
NC_014500:1646854:165106016510601651992933Dickeya dadantii 3937 chromosome, complete genomeRight origin-binding protein2e-0653.1
NC_016830:4914406:491949249194924920238747Pseudomonas fluorescens F113 chromosome, complete genometwo-component response regulator2e-0653.1
NC_017297:1700000:1707235170723517084221188Clostridium botulinum F str. 230613 chromosome, complete genomeAraC family transcriptional regulator3e-0652.8
NC_009483:3644677:366996336699633670763801Geobacter uraniireducens Rf4 chromosome, complete genomeresponse regulator receiver protein3e-0652.8
NC_011757:1532047:153808115380811539046966Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, AraC family3e-0652.8
NC_012988:1777618:1803166180316618041881023Methylobacterium extorquens DM4, complete genomeAraC family transcriptional regulator3e-0652.8
NC_009699:1698951:1707074170707417082911218Clostridium botulinum F str. Langeland chromosome, complete genomeAraC family transcriptional regulator3e-0652.8
NC_012658:1658505:1666264166626416674811218Clostridium botulinum Ba4 str. 657 chromosome, complete genomeAraC family transcriptional regulator3e-0652.8
NC_016613:2759908:278571527857152786443729Vibrio sp. EJY3 chromosome 1, complete sequencehypothetical protein3e-0652.8
NC_012880:2871480:288633428863342887275942Dickeya dadantii Ech703, complete genometranscriptional regulator, AraC family3e-0652.8
NC_014973:243000:247572247572248330759Geobacter sp. M18 chromosome, complete genometwo component AraC family transcriptional regulator3e-0652.8
NC_013205:2332174:234776623477662348590825Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transcriptional regulator, AraC family3e-0652.8
NC_011283:1178500:118002211800221180375354Klebsiella pneumoniae 342 chromosome, complete genomeAraC family transcriptional regulator3e-0652.8
NC_018720:1510084:152432915243291525297969Bifidobacterium asteroides PRL2011 chromosome, complete genometranscriptional regulator, AraC family4e-0652.4
NC_014206:1745203:1755349175534917568931545Geobacillus sp. C56-T3 chromosome, complete genomeAraC family transcriptional regulator5e-0652
NC_020210:1908000:1918917191891719204611545Geobacillus sp. GHH01, complete genometwo-component response regulator6e-0652
NC_014323:2680085:2709131270913127102581128Herbaspirillum seropedicae SmR1 chromosome, complete genomeAraC family transcription regulator protein7e-0651.6
NC_015690:3438288:3441871344187134430911221Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator7e-0651.6
NC_016935:3994500:3997754399775439989741221Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator8e-0651.2