Pre_GI Gene

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Host: NC_010001 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010001:986500 Clostridium phytofermentans ISDg, complete genome

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
9869949881661173basic membrane lipoproteinQuickGO ontologyBLASTP
9886059901401536ABC transporter relatedQuickGO ontologyBLASTP
9901339912331101inner-membrane translocatorQuickGO ontologyBLASTP
991233992192960inner-membrane translocatorQuickGO ontologyBLASTP
992375993160786transcriptional regulator AraC familyQuickGO ontologyBLASTP
9932859946071323glycoside hydrolase family 4QuickGO ontologyBLASTP
9947049957591056hypothetical proteinBLASTP
9958119968781068two component transcriptional regulator AraC familyQuickGO ontologyBLASTP
9969049988261923integral membrane sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
9991051000040936binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
10000951000940846binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
100100510025761572extracellular solute-binding protein family 1QuickGO ontologyBLASTP
100262310037171095glycosyl hydrolase family 88QuickGO ontologyBLASTP
10037331004680948hypothetical protein
10047911005084294beta-lactamase domain proteinQuickGO ontologyBLASTP
10053791006206828Cof-like hydrolaseQuickGO ontologyBLASTP
10062281006698471hypothetical protein
10069461007644699protein of unknown function DUF955QuickGO ontology
10076601007986327transcriptional regulator XRE familyQuickGO ontologyBLASTP
10082121008709498hypothetical proteinBLASTP
10097951010211417hypothetical protein
101039710116771281phage proteinQuickGO ontologyBLASTP
10116901012169480phage proteinQuickGO ontologyBLASTP
10124051012833429XkdN-like proteinQuickGO ontologyBLASTP