Pre_GI: BLASTP Hits

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Query: NC_012917:4646491:4653037 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 4653037, End: 4653615, Length: 579

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010645:1496816:150123515012351501984750Bordetella avium 197N, complete genomeantirepressor1e-1996.3
NC_010645:406794:409618409618410367750Bordetella avium 197N, complete genomehypothetical protein1e-1996.3
NC_014664:1614568:163430316343031635073771Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeprophage antirepressor4e-1994.4
NC_002655:1655944:166116416611641662042879Escherichia coli O157:H7 EDL933, complete genomeputative antirepressor protein encoded by prophage CP-933N5e-1890.5
NC_002695:1571389:157719015771901578068879Escherichia coli O157:H7 str. Sakai, complete genomeputative antirepressor protein5e-1890.5
NC_011353:1513000:151811815181181518996879Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeantirepressor protein5e-1890.5
NC_013008:1513000:151840615184061519284879Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeantirepressor protein encoded by prophage CP-933N5e-1890.5
NC_015052:1030708:104657610465761047355780Bifidobacterium longum subsp. infantis 157F, complete genomephage antirepressor1e-1479.7
NC_020181:5384015:539231953923195392948630Enterobacter aerogenes EA1509E, complete genomeputative antirepressor protein1e-1479.7
NC_011593:1680215:168222016822201682999780Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,phage antirepressor protein2e-1478.6
NC_017219:1680344:168201016820101682789780Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative phage antirepressor2e-1478.6
NC_007434:1712000:174098017409801741699720Burkholderia pseudomallei 1710b chromosome I, complete sequenceBRO family, N-terminal domain protein4e-1374.7
NC_006087:2439252:245342124534212454203783Leifsonia xyli subsp. xyli str. CTCB07, complete genomeprophage antirepressor protein5e-1373.9
NC_017167:1648913:168576016857601686524765Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1prophage antirepressor9e-1373.2
NC_009012:2927793:293490029349002935646747Clostridium thermocellum ATCC 27405, complete genomeBRO-like protein2e-1272
NC_010322:3831444:383713438371343837988855Pseudomonas putida GB-1 chromosome, complete genomeprophage antirepressor4e-1271.2
NC_017337:1107930:111257511125751113288714Staphylococcus aureus subsp. aureus ED133 chromosome, completeprophage, antirepressor, putative4e-1271.2
NC_018704:176088:194458194458195210753Amphibacillus xylanus NBRC 15112, complete genomehypothetical protein4e-1270.9
NC_015520:2974048:299950229995023000302801Mahella australiensis 50-1 BON chromosome, complete genomeprophage antirepressor1e-1169.3
NC_007712:1791766:181320518132051813984780Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein1e-1169.3
NC_016077:1944000:194682219468221947619798Acidaminococcus intestini RyC-MR95 chromosome, complete genomeprophage antirepressor2e-1168.6
NC_017986:5509569:552276155227615523573813Pseudomonas putida ND6 chromosome, complete genomeBRO domain protein4e-1167.8
NC_013173:953633:978862978862979515654Desulfomicrobium baculatum DSM 4028, complete genomeprophage antirepressor6e-1167.4
NC_003212:57061:810818108181854774Listeria innocua Clip11262, complete genomehypothetical protein1e-1066.2
NC_013315:1679000:167955516795551680328774Clostridium difficile CD196 chromosome, complete genomehypothetical protein1e-1065.9
NC_004369:868890:880230880230881018789Corynebacterium efficiens YS-314, complete genomehypothetical protein2e-1065.1
NC_014011:1139818:115821711582171158990774Aminobacterium colombiense DSM 12261 chromosome, complete genomeprophage antirepressor7e-1063.5
NC_010655:1606901:163592716359271636721795Akkermansia muciniphila ATCC BAA-835, complete genomeprophage antirepressor1e-0963.2
NC_012522:4299287:432161943216194322419801Rhodococcus opacus B4, complete genomehypothetical protein2e-0962
NC_010320:1268355:127709412770941277885792Thermoanaerobacter sp. X514 chromosome, complete genomeprophage antirepressor2e-0962
NC_010002:3547958:355748635574863558298813Delftia acidovorans SPH-1, complete genomeprophage antirepressor3e-0961.6
NC_008595:771753:792643792643793434792Mycobacterium avium 104, complete genomegp54 protein3e-0961.6
NC_017167:2298962:236904623690462369672627Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1prophage antirepressor5e-0960.8
NC_015437:1494777:150309515030951503838744Selenomonas sputigena ATCC 35185 chromosome, complete genomeprophage antirepressor5e-0960.8
NC_010577:1188438:121324012132401214028789Xylella fastidiosa M23, complete genomeprophage antirepressor5e-0960.8
NC_004556:1178897:120370012037001204488789Xylella fastidiosa Temecula1, complete genomehypothetical protein5e-0960.8
NC_002758:918827:921437921437922216780Staphylococcus aureus subsp. aureus Mu50, complete genomesimilar to anti-repressor7e-0960.5
NC_009782:920272:922882922882923661780Staphylococcus aureus subsp. aureus Mu3, complete genomehypothetical protein7e-0960.5
NC_010645:1496816:1513524151352415146481125Bordetella avium 197N, complete genomephage protein8e-0960.1
NC_012121:474144:477436477436478203768Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative antirepressor, phage associated8e-0960.1
NC_013174:2321000:232849123284912329225735Jonesia denitrificans DSM 20603, complete genomephage antirepressor protein9e-0960.1
NC_016642:3286654:329768932976893298555867Pseudovibrio sp. FO-BEG1 chromosome, complete genomeprophage antirepressor1e-0859.7
NC_014393:4323368:434092443409244341685762Clostridium cellulovorans 743B chromosome, complete genomeprophage antirepressor1e-0859.7
NC_017179:1683199:168852816885281689337810Clostridium difficile BI1, complete genomehypothetical protein1e-0859.7
NC_015975:752927:771303771303772091789Lactobacillus ruminis ATCC 27782 chromosome, complete genomeProphage antirepressor2e-0859.3
NC_003212:2413824:243981624398162440586771Listeria innocua Clip11262, complete genomehypothetical protein2e-0859.3
NC_016629:2784000:279279427927942793540747Desulfovibrio africanus str. Walvis Bay chromosome, completeprophage antirepressor1e-0859.3
NC_011001:2085986:209670520967052097502798Burkholderia cenocepacia J2315 chromosome 2, complete sequencehypothetical protein2e-0858.5
NC_011035:541560:560415560415561260846Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeputative phage associated protein2e-0858.5
NC_014774:1210004:123948712394871240272786Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completeprophage antirepressor3e-0858.5
NC_012985:1191125:228522853073789Candidatus Liberibacter asiaticus str. psy62, complete genomeprophage antirepressor4e-0857.8
NC_012985:1:228522853073789Candidatus Liberibacter asiaticus str. psy62, complete genomeprophage antirepressor4e-0857.8
NC_012559:1685812:169887816988781699522645Laribacter hongkongensis HLHK9, complete genomePhage associated-antirepressor5e-0857.4
NC_007795:1922000:196176119617611962552792Staphylococcus aureus subsp. aureus NCTC 8325, complete genomebacteriophage L54a, antirepressor, putative7e-0857
NC_014774:1210004:125044412504441251238795Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completeprophage antirepressor7e-0857
NC_002951:351029:358916358916359707792Staphylococcus aureus subsp. aureus COL, complete genomeprophage L54a, antirepressor, putative7e-0857
NC_007298:2689731:271017927101792710697519Dechloromonas aromatica RCB, complete genomeBRO, N-terminal6e-0857
NC_002946:1020175:104444710444471045292846Neisseria gonorrhoeae FA 1090, complete genomehypothetical protein, putative phage associated protein9e-0856.6
NC_007622:1842000:188313418831341883922789Staphylococcus aureus RF122, complete genomephage anti-repressor protein1e-0756.2
NC_017351:643674:647068647068647856789Staphylococcus aureus subsp. aureus 11819-97 chromosome, completephage antirepressor KilAC domain protein1e-0755.8
NC_016812:463000:473558473558474010453Sinorhizobium fredii HH103, complete genomehypothetical protein1e-0755.8
NC_009937:4122652:413458341345834135323741Azorhizobium caulinodans ORS 571, complete genomeputative prophage antirepressor1e-0755.8
NC_004129:4333302:434864343486434349527885Pseudomonas fluorescens Pf-5, complete genomeprobable phage protein2e-0755.8
NC_003485:1061344:106346110634611064204744Streptococcus pyogenes MGAS8232, complete genomeputative antirepressor3e-0755.1
NC_008525:1013979:102618110261811026984804Pediococcus pentosaceus ATCC 25745, complete genomeUncharacterized phage-encoded protein2e-0755.1
NC_010609:880196:883218883218883991774Lactobacillus reuteri JCM 1112, complete genomephage antirepressor9e-0753.5
NC_009513:870837:873859873859874632774Lactobacillus reuteri F275, complete genomeprophage antirepressor9e-0753.5
NC_017511:522679:538774538774539100327Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative phage associated protein9e-0753.5
NC_003485:579946:582257582257583018762Streptococcus pyogenes MGAS8232, complete genomeputative antirepressor2e-0652
NC_009332:1269000:130504913050491305810762Streptococcus pyogenes str. Manfredo chromosome, complete genomephage antirepressor protein2e-0652
NC_014554:1821320:183285618328561833608753Lactobacillus plantarum subsp. plantarum ST-III chromosome,hypothetical protein3e-0651.6
NC_004070:747146:753907753907754626720Streptococcus pyogenes MGAS315, complete genomeputative antirepressor - phage associated6e-0650.8
NC_003485:296140:298577298577299296720Streptococcus pyogenes MGAS8232, complete genomeputative antirepressor6e-0650.8
NC_004606:1107500:114213011421301142849720Streptococcus pyogenes SSI-1, complete genomeputative antirepressor (phage associated)6e-0650.8