Pre_GI: BLASTP Hits

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Query: NC_012731:2693091:2704894 Klebsiella pneumoniae NTUH-K2044 chromosome, complete genome

Start: 2704894, End: 2705610, Length: 717

Host Lineage: Klebsiella pneumoniae; Klebsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a liver abscess. This organism is the most medically important organism within the genus Klebsiella. It is an environmental organism found in water, soil, and on the surface of plants. Several strains have been isolated from plant tissues and are nitrogen-fixing endophytes that may be a source of nitrogen for the plant. Other strains can become opportunistic pathogens which infect humans, and typically causes hospital-acquired infections in immunocompromised patients. Major sites of infection include the lungs, where it causes a type of pneumonia, and urinary tract infections. Klebsiella can also enter the bloodstream (bacterimia) and cause sepsis. The pathogen can also infect animals and cause inflammation of the uterus in horses as well as more generalized infections in other mammals. This organism expresses numerous pathogenicity factors, including multiple adhesins, capsular polysaccharide, siderophores, and lipopolysaccharide for the evasion of host defenses. The multiple antibiotic resistance genes carried on the chromosome inhibit efforts to clear the organism from infected patients via antibiotic use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016845:2729654:274703827470382747754717Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,GntR family transcriptional regulator1e-135482
NC_011283:2627050:262869126286912629407717Klebsiella pneumoniae 342 chromosome, complete genomeGntR family transcriptional regulator3e-135480
NC_009648:1956070:197127419712741971990717Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genometranscriptional regulator2e-134478
NC_013850:2624899:262654026265402627256717Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, GntR family2e-134478
NC_016514:1627664:164873616487361649452717Enterobacter cloacae EcWSU1 chromosome, complete genomeGntR family transcriptional Regulator1e-114412
NC_015856:3536441:356124535612453561940696Collimonas fungivorans Ter331 chromosome, complete genomeregulatory protein GntR2e-29129
NC_015856:268034:267125267125268093969Collimonas fungivorans Ter331 chromosome, complete genomeGntR family transcriptional regulator5e-28124
NC_010002:2293670:231700023170002317677678Delftia acidovorans SPH-1, complete genometranscriptional regulator, GntR family7e-27120
NC_014837:1144500:116444811644481165134687Pantoea sp. At-9b chromosome, complete genomeGntR family transcriptional regulator4e-22104
NC_011959:131800:135215135215135898684Thermomicrobium roseum DSM 5159, complete genomeGntR-family transcriptional regulator1e-1480.1
NC_011894:6485500:649703764970376497684648Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, GntR family1e-1377
NC_017192:1063955:106930610693061069989684Arcobacter sp. L, complete genomeputative transcriptional regulator2e-1375.9
NC_012108:5273289:528731952873195287996678Desulfobacterium autotrophicum HRM2, complete genomeputative transcriptional regulator5e-1271.6
NC_013526:65495:890168901689705690Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genometranscriptional regulator, GntR family1e-1066.6
NC_010002:3357752:335915233591523359841690Delftia acidovorans SPH-1, complete genometranscriptional regulator, GntR family2e-1066.2
NC_006582:4256915:425897342589734259593621Bacillus clausii KSM-K16, complete genometranscriptional regulator, GntR family2e-1066.2
NC_013520:1905554:191069019106901911397708Veillonella parvula DSM 2008, complete genometranscriptional regulator, GntR family2e-1065.9
NC_016642:1913432:193922219392221939881660Pseudovibrio sp. FO-BEG1 chromosome, complete genomeGntR family transcriptional regulator6e-1064.3
NC_013093:2633000:263436726343672635044678Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, GntR family7e-1064.3
NC_010002:3357752:337233533723353373021687Delftia acidovorans SPH-1, complete genometranscriptional regulator, GntR family8e-1063.9
NC_008699:1247423:124742312474231248148726Nocardioides sp. JS614, complete genomeGntR domain protein1e-0963.5
NC_017271:4193000:422159942215994222318720Xanthomonas campestris pv. raphani 756C chromosome, completetranscriptional regulator MdcY family1e-0963.2
NC_009922:315870:338735338735339421687Alkaliphilus oremlandii OhILAs, complete genometranscriptional regulator, GntR family2e-0962.8
NC_013592:3263005:328412532841253284826702Dickeya dadantii Ech586, complete genometranscriptional regulator, GntR family2e-0962.8
NC_010511:1351000:135481613548161355487672Methylobacterium sp. 4-46 chromosome, complete genomeGntR family transcriptional regulator4e-0962
NC_007952:1293024:129591312959131296710798Burkholderia xenovorans LB400 chromosome 2, complete sequenceTranscriptional regulator, GntR family6e-0961.2
NC_013446:2655955:266091026609102661545636Comamonas testosteroni CNB-2, complete genometranscriptional regulator, GntR family6e-0961.2
NC_013939:1625491:163746116374611638132672Deferribacter desulfuricans SSM1, complete genomeGntR family transcriptional regulator6e-0961.2
NC_010505:3376322:339823433982343399088855Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, GntR family7e-0960.8
NC_014011:472650:487302487302487922621Aminobacterium colombiense DSM 12261 chromosome, complete genometranscriptional regulator, GntR family7e-0960.8
NC_020207:1795993:181376518137651814427663Enterococcus faecium NRRL B-2354, complete genomeregulatory protein, GntR Bacterial regulatory protein, GntR7e-0960.8
NC_014840:205723:266022266022266699678Pantoea sp. At-9b plasmid pPAT9B03, complete sequencetranscriptional regulator, GntR family7e-0960.8
NC_018515:937994:937994937994938674681Desulfosporosinus meridiei DSM 13257 chromosome, complete genometranscriptional regulator1e-0860.5
NC_014210:5683616:569274356927435693420678Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, GntR family1e-0860.5
NC_012560:2315350:231535023153502316072723Azotobacter vinelandii DJ, complete genometranscriptional regulator, GntR9e-0960.5
NC_021150:2315362:231536223153622316084723Azotobacter vinelandii CA6, complete genometranscriptional regulator, GntR9e-0960.5
NC_016803:3502749:351406835140683514757690Desulfovibrio desulfuricans ND132 chromosome, complete genomeGntR family transcriptional regulator1e-0860.1
NC_010676:897801:899693899693900427735Burkholderia phytofirmans PsJN chromosome 2, complete sequencetranscriptional regulator, GntR family1e-0860.1
NC_016633:1898234:190115619011561901821666Sphaerochaeta pleomorpha str. Grapes chromosome, complete genometranscriptional regulator1e-0860.1
NC_016147:2964178:297771029777102978438729Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeGntR family transcriptional regulator2e-0859.7
NC_014041:1084246:110089111008911101589699Zunongwangia profunda SM-A87 chromosome, complete genomeputative GntR family regulatory protein2e-0859.7
NC_020272:3396800:342166934216693422334666Bacillus amyloliquefaciens IT-45, complete genomeFatty acid metabolism regulator protein2e-0859.3
NC_014815:4621552:465611546561154656822708Micromonospora sp. L5 chromosome, complete genometranscriptional regulator, gntr family2e-0859.3
NC_009668:46010:612776127761927651Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceGntR family transcriptional regulator3e-0858.9
NC_007963:3553678:356654835665483567216669Chromohalobacter salexigens DSM 3043, complete genometranscriptional regulator, GntR family3e-0858.9
NC_009439:3770282:380040438004043801204801Pseudomonas mendocina ymp, complete genomeGntR family transcriptional regulator4e-0858.5
NC_014206:2971304:298470229847022985352651Geobacillus sp. C56-T3 chromosome, complete genomeGntR family transcriptional regulator4e-0858.5
NC_007974:785216:801188801188802060873Ralstonia metallidurans CH34 chromosome 2, complete sequencetranscriptional regulator, GntR family5e-0858.2
NC_008314:1955793:195959419595941960286693Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator6e-0857.8
UCMB5137:3660165:368860236886023689270669Bacillus atrophaeus UCMB-5137putative transcriptional regulator2e-0756.6
NC_016894:3329562:333153633315363332213678Acetobacterium woodii DSM 1030 chromosome, complete genomeGntR family transcriptional regulator1e-0756.6
NC_014840:205723:261196261196261846651Pantoea sp. At-9b plasmid pPAT9B03, complete sequencetranscriptional regulator, GntR family1e-0756.6
NC_008254:611437:6283116283116295011191Mesorhizobium sp. BNC1, complete genometranscriptional regulator, GntR family2e-0756.2
AC_000091:1521976:152197615219761522641666Escherichia coli W3110 DNA, complete genomepredicted DNA-binding transcriptional regulator2e-0756.2
NC_010473:1607646:160888116088811609546666Escherichia coli str. K-12 substr. DH10B, complete genomepredicted DNA-binding transcriptional regulator2e-0756.2
NC_000913:1517051:151828615182861518951666Escherichia coli K12, complete genomepredicted DNA-binding transcriptional regulator2e-0756.2
NC_012759:1409086:141034514103451411010666Escherichia coli BW2952 chromosome, complete genomeputative DNA-binding transcriptional regulator2e-0756.2
NC_016048:3667890:367938436793843680112729Oscillibacter valericigenes Sjm18-20, complete genomeputative GntR family transcriptional regulator2e-0756.2
NC_009937:412302:415716415716416384669Azorhizobium caulinodans ORS 571, complete genomeGntR family transcriptional regulator3e-0755.8
NC_004578:6089958:610844861084486109113666Pseudomonas syringae pv. tomato str. DC3000, complete genometranscriptional regulator, GntR family3e-0755.8
NC_018691:2810949:281205628120562812796741Alcanivorax dieselolei B5 chromosome, complete genomeGntR family transcriptional regulator3e-0755.5
NC_015458:1692401:169240116924011693138738Pusillimonas sp. T7-7 chromosome, complete genomeGntR family transcriptional regulator4e-0755.5
NC_011961:891815:896992896992897783792Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequencetranscriptional regulater GntR family protein5e-0755.1
NC_020209:3874844:390377339037733904372600Pseudomonas poae RE*1-1-14, complete genomeGntR family transcriptional regulator4e-0755.1
NC_006350:1938631:197258619725861973254669Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative GntR-family transcriptional regulator4e-0755.1
NC_011830:2177187:220439422043942205059666Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, GntR family4e-0755.1
NC_007644:1352794:135436113543611355110750Moorella thermoacetica ATCC 39073, complete genomeregulatory protein GntR, HTH5e-0754.7
NC_010511:7553703:755681175568117557539729Methylobacterium sp. 4-46 chromosome, complete genomeGntR family transcriptional regulator6e-0754.7
NC_007963:1190847:121570212157021216370669Chromohalobacter salexigens DSM 3043, complete genometranscriptional regulator, GntR family1e-0653.9
NC_008391:1210451:123699212369921237723732Burkholderia cepacia AMMD chromosome 2, complete sequencetranscriptional regulator, GntR family1e-0653.5
NC_010511:6169468:619195061919506192657708Methylobacterium sp. 4-46 chromosome, complete genome1e-0653.1
NC_015379:4426827:444373244437324444415684Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, GntR family1e-0653.1
NC_014910:3458475:348208934820893482757669Alicycliphilus denitrificans BC chromosome, complete genomegntr domain protein2e-0652.8
NC_008148:583030:583030583030583788759Rubrobacter xylanophilus DSM 9941, complete genomeGntR-like protein2e-0652.8
NC_007948:3502843:352215035221503522902753Polaromonas sp. JS666, complete genometranscriptional regulator, GntR family3e-0652.4
NC_010511:6067000:610992561099256110659735Methylobacterium sp. 4-46 chromosome, complete genomeGntR family transcriptional regulator3e-0652.4
NC_018524:4564493:457843645784364579053618Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomebacterial regulatory s, gntR family protein3e-0652.4
NC_015563:2702787:271975127197512720407657Delftia sp. Cs1-4 chromosome, complete genomeGntR family transcriptional regulator3e-0652.4
CP002207:3584000:359051735905173591182666Bacillus atrophaeus 1942, complete genomeGntR family transcriptional regulator3e-0652.4
NC_014639:3584000:359051735905173591182666Bacillus atrophaeus 1942 chromosome, complete genomeGntR family transcriptional regulator3e-0652.4
NC_020291:4033000:404904640490464049720675Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometranscriptional regulator, GntR family3e-0652
NC_013740:2218215:222773122277312228360630Acidaminococcus fermentans DSM 20731, complete genometranscriptional regulator, GntR family4e-0652
NC_016906:4123000:412848441284844129173690Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative GntR family transcriptional regulator5e-0651.6
NC_009921:5609770:561622556162255616935711Frankia sp. EAN1pec, complete genometranscriptional regulator, GntR family5e-0651.6
NC_014011:527681:541220541220541882663Aminobacterium colombiense DSM 12261 chromosome, complete genometranscriptional regulator, GntR family5e-0651.6
NC_018691:761560:778164778164778892729Alcanivorax dieselolei B5 chromosome, complete genomeGntR-family transcriptional regulator5e-0651.6
NC_007434:2449721:247662724766272477433807Burkholderia pseudomallei 1710b chromosome I, complete sequencetranscriptional regulator, gntR family4e-0651.6
NC_007953:314872:320623320623321315693Burkholderia xenovorans LB400 chromosome 3, complete sequenceTranscriptional regulator, GntR family4e-0651.6
NC_012912:844339:850632850632851399768Dickeya zeae Ech1591, complete genomeGntR domain protein6e-0651.2
NC_013526:439813:465389465389466147759Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genometranscriptional regulator, GntR family6e-0651.2
NC_006350:1909639:191544419154441916208765Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative GntR-family regulatory protein6e-0651.2
NC_016593:762216:786841786841787500660Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completetranscriptional regulator, GntR6e-0651.2
NC_020210:661236:668499668499669158660Geobacillus sp. GHH01, complete genomeHTH-type transcriptional regulator6e-0651.2
NC_009142:5647737:565529756552975655986690Saccharopolyspora erythraea NRRL 2338, complete genomepossible transcriptional regulator, GntR family9e-0650.8
NC_016612:361417:361417361417362190774Klebsiella oxytoca KCTC 1686 chromosome, complete genomeGntR family transcriptional regulator protein9e-0650.8
NC_015458:3390674:340150434015043402238735Pusillimonas sp. T7-7 chromosome, complete genomeGntR family transcriptional regulator8e-0650.8
NC_012522:3038890:304323930432393043943705Rhodococcus opacus B4, complete genomeputative GntR family transcriptional regulator8e-0650.8
NC_004337:1783645:180433618043361805058723Shigella flexneri 2a str. 301, complete genomehypothetical protein7e-0650.8
NC_017328:1835108:185687918568791857601723Shigella flexneri 2002017 chromosome, complete genomeputative HTH-type transcriptional regulator yncC7e-0650.8
NC_014364:2904443:291625529162552916920666Spirochaeta smaragdinae DSM 11293 chromosome, complete genometranscriptional regulator, GntR family7e-0650.8
NC_008258:1784637:180366018036601804325666Shigella flexneri 5 str. 8401, complete genomehypothetical protein7e-0650.8
NC_008686:1383891:140152714015271402195669Paracoccus denitrificans PD1222 chromosome 1, complete sequencetranscriptional regulator, GntR family1e-0550.4