Pre_GI: BLASTP Hits

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Query: NC_011883:1601552:1610161 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,

Start: 1610161, End: 1611114, Length: 954

Host Lineage: Desulfovibrio desulfuricans; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 was isolated from the rumen of a sheep. D. desulfuricans reduces sulfate to sulfide found in soil, freshwater, saltwater and the intestinal tract of animals. This organism grows anaerobically and utilizes a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite, as well as others. The nitrate reduction pathway is not expressed while sulfate is available. Alternatively, the sulfate reduction pathway is constitutively expressed when the cells are growing with nitrate reduction. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making this organism of interest as bioremediator. Metal corrosion, a problem that is partly the result of the collective activity of this bacterium, results in billions of dollars in losses each year to the petroleum industry. This organism is responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012731:5074000:508209250820925083057966Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein6e-37154
NC_011283:105245:113634113634114599966Klebsiella pneumoniae 342 chromosome, complete genomelipoprotein9e-36150
NC_013850:109500:118830118830119795966Klebsiella variicola At-22 chromosome, complete genomesecretion protein HlyD family protein9e-36150
NC_014307:3240430:324043032404303241368939Ralstonia solanacearum CFBP2957 chromosome, complete genomesecretion protein hlyd-like protein1e-34147
NC_016845:5162481:517056951705695171456888Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein2e-34146
NC_009648:4359875:436791343679134368800888Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein2e-34146
NC_015856:2646816:265172826517282652708981Collimonas fungivorans Ter331 chromosome, complete genomemembrane-fusion protein7e-34144
NC_007404:1126756:1144110114411011451801071Thiobacillus denitrificans ATCC 25259, complete genomeHlyD family secretion protein2e-33143
NC_016629:415711:4324784324784335301053Desulfovibrio africanus str. Walvis Bay chromosome, completesecretion protein HlyD family protein2e-1376.6
NC_015224:1641819:164181916418191642805987Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein3e-1376.3
NC_016830:3869572:3893476389347638945521077Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein6e-1375.1
NC_012691:2614603:2690955269095526920341080Tolumonas auensis DSM 9187, complete genomesecretion protein HlyD family protein4e-1272.4
NC_016745:3170384:319085031908503191806957Oceanimonas sp. GK1 chromosome, complete genomehypothetical protein4e-1272.4
NC_017098:1149145:1151963115196311529971035Spirochaeta africana DSM 8902 chromosome, complete genomemultidrug resistance efflux pump8e-1271.2
NC_009454:1577319:158027115802711581248978Pelotomaculum thermopropionicum SI, complete genomemembrane-fusion protein7e-1168.2
NC_020829:4390417:439398043939804394951972Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein2e-1067
NC_010814:3673983:3677891367789136789641074Geobacter lovleyi SZ, complete genomesecretion protein HlyD family protein2e-1066.6
NC_012779:2664849:266910426691042670093990Edwardsiella ictaluri 93-146, complete genomeputative fusaric acid resistance protein2e-1066.6
NC_007613:3470314:3473046347304634741131068Shigella boydii Sb227, complete genomehypothetical protein9e-1064.7
NC_009656:1994392:2034307203430720353411035Pseudomonas aeruginosa PA7 chromosome, complete genomeputative secretion protein9e-1064.7
NC_008258:3550500:3554590355459035556571068Shigella flexneri 5 str. 8401, complete genomehypothetical protein9e-1064.7
NC_004741:4160500:4178757417875741798241068Shigella flexneri 2a str. 2457T, complete genomehypothetical protein9e-1064.7
NC_004337:3590323:3594179359417935952461068Shigella flexneri 2a str. 301, complete genomehypothetical protein9e-1064.7
NC_017328:3625000:3628896362889636299631068Shigella flexneri 2002017 chromosome, complete genomeAuxiliary transport protein, membrane fusion protein (MFP) family9e-1064.7
NC_011751:4074586:4077318407731840783851068Escherichia coli UMN026 chromosome, complete genomeputative HlyD family secretion protein1e-0964.3
CU928145:3958572:3961304396130439623711068Escherichia coli 55989 chromosome, complete genomeputative HlyD family secretion protein1e-0964.3
NC_011748:3958572:3961304396130439623711068Escherichia coli 55989, complete genomeputative HlyD family secretion protein1e-0964.3
NC_013941:4249871:4252603425260342536701068Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeAuxiliary transport protein, membrane fusion protein (MFP) family1e-0964.3
NC_016830:4010637:4020101402010140211261026Pseudomonas fluorescens F113 chromosome, complete genomeMultidrug resistance efflux pump1e-0964.3
NC_015709:1459838:1482108148210814831841077Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completesecretion protein HlyD family protein1e-0964.3
AC_000091:3995233:4009813400981340108801068Escherichia coli W3110 DNA, complete genomepredicted HlyD family secretion protein1e-0963.9
NC_000913:3624826:3627558362755836286251068Escherichia coli K12, complete genomepredicted HlyD family secretion protein1e-0963.9
NC_010498:3838419:3841151384115138422181068Escherichia coli SMS-3-5, complete genomeMFP family transporter1e-0963.9
NC_012947:248000:2798862798862809531068Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completesecretion protein HlyD1e-0963.9
NC_012967:3549880:3560223356022335612901068Escherichia coli B str. REL606 chromosome, complete genomeputative HlyD family secretion protein1e-0963.9
NC_007384:3897000:3900936390093639020031068Shigella sonnei Ss046, complete genomehypothetical protein2e-0963.5
NC_016822:3923908:3927764392776439288311068Shigella sonnei 53G, complete genomehypothetical protein2e-0963.5
CP002185:3822470:3825202382520238262691068Escherichia coli W, complete genomepredicted HlyD family secretion protein3e-0963.2
NC_015850:1060000:1078648107864810796821035Acidithiobacillus caldus SM-1 chromosome, complete genomesecretion protein HlyD family protein8e-0961.6
NC_013508:2587913:259133825913382592327990Edwardsiella tarda EIB202, complete genomehypothetical protein1e-0860.8
NC_017059:747624:7652117652117663111101Rhodospirillum photometricum DSM 122, complete genomeHlyD family secretion protein2e-0860.1
NC_014655:2747399:274947727494772750427951Leadbetterella byssophila DSM 17132 chromosome, complete genomebiotin/lipoyl attachment domaiN-containing protein3e-0859.7
NC_008025:2211813:2228407222840722296931287Deinococcus geothermalis DSM 11300, complete genomesecretion protein HlyD3e-0859.7
NC_018697:618832:6262226262226273251104Cycloclasticus sp. P1 chromosome, complete genomeHlyD-family secretion protein, yhiI-like protein3e-0859.7
NC_013960:2761353:278221127822112783191981Nitrosococcus halophilus Nc4 chromosome, complete genomesecretion protein HlyD family protein4e-0859.3
NC_008577:3485878:3487437348743734885311095Shewanella sp. ANA-3 chromosome 1, complete sequencesecretion protein HlyD family protein4e-0858.9
NC_011894:3029964:3070279307027930714301152Methylobacterium nodulans ORS 2060, complete genomesecretion protein HlyD family protein9e-0857.8
NC_008313:2629281:2629281262928126303301050Ralstonia eutropha H16 chromosome 1, complete sequencemultidrug resistance efflux pump1e-0757.8
NC_014366:354000:3755903755903766841095Gamma proteobacterium HdN1, complete genomeSecretion protein HlyD2e-0757
NC_011365:1865687:1885019188501918860951077Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomesecretion protein HlyD family protein2e-0757
NC_012880:2871480:2888895288889528900761182Dickeya dadantii Ech703, complete genomesecretion protein HlyD family protein3e-0756.6
NC_011206:1792621:1804056180405618054291374Acidithiobacillus ferrooxidans ATCC 53993, complete genomesecretion protein HlyD family protein3e-0756.2
NC_011761:1904637:1918446191844619197831338Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completetoxin secretion protein, HlyD family3e-0756.2
NC_015942:2213710:2213710221371022147441035Acidithiobacillus ferrivorans SS3 chromosome, complete genomesecretion protein HlyD family protein4e-0755.8
NC_014315:1435243:1454424145442414554401017Nitrosococcus watsoni C-113 chromosome, complete genomeHlyD family secretion protein4e-0755.5
NC_010655:1606901:1647982164798216490041023Akkermansia muciniphila ATCC BAA-835, complete genomesecretion protein HlyD family protein6e-0755.5
NC_010334:609636:6096366096366107091074Shewanella halifaxensis HAW-EB4, complete genomesecretion protein HlyD family protein7e-0755.1
NC_014500:1646854:1648304164830416494821179Dickeya dadantii 3937 chromosome, complete genomemembrane fusion component of tripartite multidrug resistance system9e-0754.7
NC_007973:1821753:1824523182452318255901068Ralstonia metallidurans CH34 chromosome 1, complete sequencesecretion protein HlyD1e-0654.3
NC_017249:3406570:3421878342187834229391062Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein2e-0653.5
NC_011027:1153592:115490511549051155828924Chlorobaculum parvum NCIB 8327, complete genomeputative ABC transport system, lipoprotein4e-0652.8
NC_010125:1011430:1013728101372810148041077Gluconacetobacter diazotrophicus PAl 5, complete genomeputative secretion protein, HlyD-family3e-0652.8
NC_008783:1101973:1115432111543211165381107Bartonella bacilliformis KC583, complete genomeauxiliary transport protein, membrane fusion protein (MFP) family3e-0652.8
NC_010515:2691000:2724369272436927254181050Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencesecretion protein HlyD family protein3e-0652.8
NC_013520:1559000:1563659156365915647051047Veillonella parvula DSM 2008, complete genomesecretion protein HlyD family protein3e-0652.8
NC_014960:2111397:2115490211549021166891200Anaerolinea thermophila UNI-1, complete genomesecretion protein HlyD family protein3e-0652.8
NC_010995:4297361:431998443199844320940957Cellvibrio japonicus Ueda107, complete genomemembrane-fusion protein5e-0652
NC_015675:4526500:4547796454779645489261131Mesorhizobium opportunistum WSM2075 chromosome, complete genomesecretion protein HlyD family protein5e-0652
NC_020541:2264521:226556722655672266403837Rhodanobacter sp. 2APBS1, complete genome6e-0652