Pre_GI: BLASTP Hits

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Query: NC_011593:2504671:2514309 Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,

Start: 2514309, End: 2514980, Length: 672

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This strain was isolated from human infant feces. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium longum is found in adult humans and formula fed infants as a normal component of gut flora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013205:526281:573068573068573763696Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,two component transcriptional regulator, LuxR family8e-0960.8
NC_009633:4308016:430741543074154308041627Alkaliphilus metalliredigens QYMF chromosome, complete genometwo component LuxR family transcriptional regulator2e-0652.8
NC_014550:1581812:161597616159761616668693Arthrobacter arilaitensis Re117, complete genometwo-component system response regulator1e-0653.5
NC_006513:1379735:140149814014981402118621Azoarcus sp. EbN1, complete genometwo-component response regulator3e-0755.5
NC_014551:199500:222326222326222970645Bacillus amyloliquefaciens DSM 7, complete genometwo-component response regulator RBAM_0024909e-1063.5
NC_009725:200071:221796221796222440645Bacillus amyloliquefaciens FZB42, complete genometwo-component response regulator2e-0652.8
NC_020272:3706722:370779937077993708443645Bacillus amyloliquefaciens IT-45, complete genomeResponse regulator uvrY9e-0753.9
NC_017190:182449:205117205117205761645Bacillus amyloliquefaciens LL3 chromosome, complete genometranscriptional regulatory protein degU9e-1063.5
NC_020410:198000:221032221032221676645Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeTwo-component response regulator (yfiK)1e-0653.5
NC_017188:177500:200323200323200967645Bacillus amyloliquefaciens TA208 chromosome, complete genometwo-component response regulator3e-0961.6
NC_017191:183500:206233206233206877645Bacillus amyloliquefaciens XH7 chromosome, complete genometwo-component response regulator3e-0961.6
NC_006270:2657726:267636626763662677010645Bacillus licheniformis ATCC 14580, complete genometwo-component response regulator8e-0650.8
NC_006322:2658587:267722626772262677870645Bacillus licheniformis ATCC 14580, complete genomehypothetical protein8e-0650.8
NC_016047:2658000:265939126593912660035645Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completetwo component response regulator1e-0653.1
NC_012669:96966:110175110175110840666Beutenbergia cavernae DSM 12333, complete genometwo component transcriptional regulator, LuxR family1e-0653.5
NC_008618:1804610:181705918170591817715657Bifidobacterium adolescentis ATCC 15703, complete genometwo-component response regulator6e-21100
NC_018720:993869:101301410130141013688675Bifidobacterium asteroides PRL2011 chromosome, complete genometwo component transcriptional regulator, LuxR family4e-0858.5
NC_011593:2014787:202341620234162024117702Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,two component transcriptional regulator, LuxR family1e-22106
NC_011593:533884:551474551474552181708Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,two component transcriptional regulator, LuxR family1e-0653.5
NC_011593:1202726:122952912295291230212684Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,two component transcriptional regulator, LuxR family2e-0652.8
NC_017219:275476:287130287130287576447Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein1e-0860.1
NC_017219:1203500:122933212293321230003672Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative two-component response regulator5e-0651.2
NC_017219:538864:551267551267551974708Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative two-component response regulator1e-0653.5
NC_016943:1314500:133087813308781331534657Blastococcus saxobsidens DD2, complete genomeLuxR family two component transcriptional regulator6e-0857.8
NC_012491:6143928:6163238616323861650281791Brevibacillus brevis NBRC 100599, complete genometwo-component hybrid sensor and regulator4e-1168.2
NC_012491:1293086:1322463132246313242711809Brevibacillus brevis NBRC 100599, complete genometwo-component hybrid sensor and regulator2e-0755.8
NC_010627:532407:534531534531535163633Burkholderia phymatum STM815 plasmid pBPHY02, complete sequencetwo component transcriptional regulator, LuxR family4e-1168.6
NC_010627:463646:466207466207466839633Burkholderia phymatum STM815 plasmid pBPHY02, complete sequence1e-0963.5
NC_010627:532407:532407532407533048642Burkholderia phymatum STM815 plasmid pBPHY02, complete sequencetwo component transcriptional regulator, LuxR family1e-0756.6
NC_007951:2904644:290556829055682906209642Burkholderia xenovorans LB400 chromosome 1, complete sequenceTwo Component Transcriptional regulator, LuxR family4e-0755.1
NC_008610:1068429:108364410836441084273630Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica),two component transcriptional regulator, LuxR family7e-0857.4
NC_009465:938378:950758950758951387630Candidatus Vesicomyosocius okutanii HA, complete genometwo-component system, nitrate/nitrite response regulator1e-0653.5
NC_009792:4017510:403852040385204039164645Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-0756.2
NC_003030:249648:271300271300271926627Clostridium acetobutylicum ATCC 824, complete genomeResponse regulator (CheY-like recever domain and HTH DNA-binding domain)2e-0755.8
NC_015687:250768:271298271298271924627Clostridium acetobutylicum DSM 1731 chromosome, complete genomeresponse regulator2e-0755.8
NC_009617:4436837:443916244391624439821660Clostridium beijerinckii NCIMB 8052 chromosome, complete genometwo component LuxR family transcriptional regulator3e-0858.5
NC_020291:552104:570950570950571570621Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometwo component transcriptional regulator, LuxR family2e-0755.8
NC_014614:2434017:245401924540192454687669Clostridium sticklandii, complete genomeputative transcriptional regulator YhcZ5e-0961.2
NC_013446:1648556:166244216624421663029588Comamonas testosteroni CNB-2, complete genometwo component transcriptional regulator, LuxR6e-0651.2
NC_013739:717352:720391720391721038648Conexibacter woesei DSM 14684, complete genometwo component transcriptional regulator, LuxR family1e-1067
NC_016801:394400:406743406743407444702Corynebacterium diphtheriae C7 (beta) chromosome, complete genometwo-component system response regulator2e-0962.8
NC_012704:1979183:200179820017982002427630Corynebacterium kroppenstedtii DSM 44385, complete genometwo-component system, response regulator8e-0650.8
NC_009455:820821:838232838232838861630Dehalococcoides sp. BAV1 chromosome, complete genometwo component LuxR family transcriptional regulator2e-0859.3
NC_007356:1221500:123660012366001237316717Dehalococcoides sp. CBDB1, complete genomeDNA-binding response regulator, LuxR family1e-0653.5
NC_012526:2483000:250248225024822503132651Deinococcus deserti VCD115, complete genomeputative response regulator, NarL1e-1169.7
NC_008025:1799106:181593418159341816599666Deinococcus geothermalis DSM 11300, complete genometwo component transcriptional regulator, LuxR family3e-0755.5
NC_015161:162000:165219165219165887669Deinococcus proteolyticus MRP chromosome, complete genometwo component transcriptional regulator, LuxR family7e-1270.9
NC_011830:1288984:129046112904611291114654Desulfitobacterium hafniense DCB-2, complete genometwo component transcriptional regulator, LuxR family1e-0860.1
NC_007907:4692336:471296347129634713610648Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0652.8
NC_013216:3907497:391877139187713919421651Desulfotomaculum acetoxidans DSM 771, complete genometwo component transcriptional regulator, LuxR family1e-0653.1
NC_021184:148000:151270151270151911642Desulfotomaculum gibsoniae DSM 7213, complete genomeresponse regulator containing a CheY-like receiver domain and an HTH DNA-binding domain1e-0963.2
NC_014500:3097362:312203831220383122694657Dickeya dadantii 3937 chromosome, complete genomeResponse regulator of the two-component transcriptional regulatory system UvrY-BarA (ExpA-ExpS, GacA-GacS)2e-0756.2
NC_013592:1668092:168052916805291681185657Dickeya dadantii Ech586, complete genometwo component transcriptional regulator, LuxR family1e-0756.2
NC_012880:1711062:171942517194251720081657Dickeya dadantii Ech703, complete genometwo component transcriptional regulator, LuxR family2e-0859.3
NC_012912:1701231:173674617367461737408663Dickeya zeae Ech1591, complete genometwo component transcriptional regulator, LuxR family4e-0858.5
NC_012779:2184927:218675221867522187408657Edwardsiella ictaluri 93-146, complete genomeresponse regulator UvrY3e-0755.1
NC_016514:2950860:295268929526892953345657Enterobacter cloacae EcWSU1 chromosome, complete genomeresponse regulator uvrY3e-0652
NC_009436:2685910:269959826995982700254657Enterobacter sp. 638, complete genomeresponse regulator9e-0650.4
NC_004547:3207776:323046732304673231123657Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeresponse regulator1e-0756.6
NC_008278:4023918:405790440579044058539636Frankia alni ACN14a, complete genomeputative two-component system response regulator3e-0858.9
NC_015656:3200500:322568332256833226333651Frankia symbiont of Datisca glomerata chromosome, complete genometwo component LuxR family transcriptional regulator4e-0651.6
NC_014394:2228470:223795022379502238585636Gallionella capsiferriformans ES-2 chromosome, complete genometwo component transcriptional regulator, LuxR family9e-1167
NC_013721:533048:549417549417550070654Gardnerella vaginalis 409-05, complete genometranscriptional regulator, LuxR family2e-2099
NC_013721:1581370:158256015825601583210651Gardnerella vaginalis 409-05, complete genometranscriptional regulator, LuxR family1e-23110
NC_014650:2417509:243355024335502434185636Geobacillus sp. Y4.1MC1 chromosome, complete genomeLuxR family transcriptional regulator2e-0756.2
NC_009328:448224:494722494722495354633Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeDNA-binding response regulator3e-0652.4
NC_015497:2859724:287195728719572872604648Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genometwo component transcriptional regulator, LuxR family6e-0754.3
NC_016631:4423658:443437744343774435015639Granulicella mallensis MP5ACTX8 chromosome, complete genometwo component transcriptional regulator, LuxR family5e-1064.7
NC_009138:1843998:188203818820381882685648Herminiimonas arsenicoxydans, complete genomeputative DNA-binding response regulator, LuxR family1e-0757
NC_009659:1024201:103203310320331032662630Janthinobacterium sp. Marseille chromosome, complete genometwo-component response regulator5e-0858.2
NC_009664:4423829:449317644931764493853678Kineococcus radiotolerans SRS30216, complete genometwo component transcriptional regulator, LuxR family2e-0756.2
NC_009664:4377777:439903043990304399665636Kineococcus radiotolerans SRS30216, complete genometwo component transcriptional regulator, LuxR family4e-0651.6
NC_009664:4347718:435058843505884351235648Kineococcus radiotolerans SRS30216, complete genometwo component transcriptional regulator, LuxR family9e-0857
NC_016109:785819:805566805566806267702Kitasatospora setae KM-6054, complete genomeputative two-component system response regulator3e-0858.9
NC_009648:3803622:383750138375013838115615Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeDNA-binding transcriptional activator EvgA6e-0651.2
NC_010617:774914:777404777404778015612Kocuria rhizophila DC2201, complete genomeNarL family two-component response regulator2e-1065.9
NC_013729:4835452:484012948401294840815687Kribbella flavida DSM 17836, complete genometwo component transcriptional regulator, LuxR family3e-0652.4
NC_013169:612456:616178616178616864687Kytococcus sedentarius DSM 20547, complete genomeresponse regulator containing a CheY-like receiver domain and an HTH DNA-binding domain1e-0653.5
NC_011894:901630:921065921065921763699Methylobacterium nodulans ORS 2060, complete genometwo component transcriptional regulator, LuxR family9e-0960.5
NC_010725:3992948:399503339950333995698666Methylobacterium populi BJ001, complete genometwo component transcriptional regulator, LuxR family7e-1063.9
NC_014207:500373:514825514825515484660Methylotenera sp. 301 chromosome, complete genometwo component transcriptional regulator, LuxR family2e-0652.8
NC_012803:1753138:177323917732391773913675Micrococcus luteus NCTC 2665, complete genomeresponse regulator containing a CheY-like receiver domain and an HTH DNA-binding domain1e-0653.5
NC_017955:2494640:251305325130532513715663Modestobacter marinus, complete genomeLuxR family two component transcriptional regulator1e-1376.6
NC_007644:3229:247052470525370666Moorella thermoacetica ATCC 39073, complete genometwo component transcriptional regulator, LuxR family3e-0652
NC_013235:593289:606074606074606721648Nakamurella multipartita DSM 44233, complete genometwo component transcriptional regulator, LuxR family1e-0756.6
NC_015731:990000:100647310064731007105633Nitrosomonas sp. Is79A3 chromosome, complete genomeLuxR family two component transcriptional regulator3e-0858.9
NC_016887:3255500:326288632628863263536651Nocardia cyriacigeorgica GUH-2, complete genomeLuxR family two component transcriptional regulator7e-0857.4
NC_008699:1067855:107178610717861072442657Nocardioides sp. JS614, complete genomeresponse regulator receiver4e-1271.6
NC_018524:4848154:487061648706164871275660Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomebacterial regulatory s, luxR family protein1e-0653.5
NC_014210:5048502:507248350724835073160678Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,two component transcriptional regulator, LuxR family4e-1271.6
NC_014210:2372813:239584423958442396497654Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,two component transcriptional regulator, LuxR family1e-0757
NC_003272:2560329:256736625673662567995630Nostoc sp. PCC 7120, complete genometwo-component response regulator2e-0755.8
NC_014761:417377:420772420772421413642Oceanithermus profundus DSM 14977 chromosome, complete genometwo component transcriptional regulator, luxr family3e-1168.6
NC_016599:3616204:363452036345203635173654Owenweeksia hongkongensis DSM 17368 chromosome, complete genomeresponse regulator containing a CheY-like receiver domain and an HTH DNA-binding domain8e-0857.4
NC_016935:7426389:7438666743866674404591794Paenibacillus mucilaginosus 3016 chromosome, complete genomeresponse regulator2e-0859.3
NC_015690:7334786:7346928734692873483971470Paenibacillus mucilaginosus KNP414 chromosome, complete genomeresponse regulator3e-0858.9
NC_013406:5020690:502420850242085024816609Paenibacillus sp. Y412MC10 chromosome, complete genomeLuxR family two component transcriptional regulator7e-1167.4
NC_013406:303218:335823335823336587765Paenibacillus sp. Y412MC10 chromosome, complete genometwo component AraC family transcriptional regulator4e-0651.6
NC_016816:2953530:298141929814192982078660Pantoea ananatis LMG 5342, complete genomeLuxR family two component transcriptional regulator8e-0857.4
NC_014837:1570500:157467515746751575334660Pantoea sp. At-9b chromosome, complete genomeLuxR family two component transcriptional regulator9e-0753.9
NC_008463:2654014:265550426555042656148645Pseudomonas aeruginosa UCBPP-PA14, complete genomeresponse regulator GacA9e-0650.4
NC_010322:1817598:186165718616571862274618Pseudomonas putida GB-1 chromosome, complete genometwo component LuxR family transcriptional regulator5e-0961.2
NC_013501:1140390:115172711517271152362636Rhodothermus marinus DSM 4252, complete genometwo component transcriptional regulator, LuxR family1e-0963.2
NC_009767:5464796:546773054677305468371642Roseiflexus castenholzii DSM 13941, complete genometwo component transcriptional regulator, LuxR family4e-0651.6
NC_009142:2565561:258504625850462585729684Saccharopolyspora erythraea NRRL 2338, complete genomeresponse regulator, two-component system4e-0651.6
NC_013521:2193203:219611221961122196762651Sanguibacter keddieii DSM 10542, complete genomeresponse regulator containing a CheY-like receiver domain and an HTH DNA-binding domain2e-0652.8
NC_008577:1885809:188912718891271889771645Shewanella sp. ANA-3 chromosome 1, complete sequencetwo component transcriptional regulator, LuxR family3e-0858.5
NC_008322:1898000:189876518987651899409645Shewanella sp. MR-7, complete genometwo component transcriptional regulator, LuxR family5e-0858.2
NC_018868:1271742:127431912743191274993675Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeLuxR family two component transcriptional regulator2e-0859.7
NC_016815:1085462:110319811031981103878681Sinorhizobium fredii HH103 plasmid pSfHH103e complete sequenceTranscriptional regulatory protein degU2e-0755.8
NC_018000:3371829:337320133732013373881681Sinorhizobium fredii USDA 257 chromosome, complete genometwo-component system response regulator2e-0652.4
NC_010162:7620000:762793276279327628660729Sorangium cellulosum 'So ce 56', complete genometwo-component system response regulator3e-0652
NC_014364:4416467:442761644276164428260645Spirochaeta smaragdinae DSM 11293 chromosome, complete genometwo component transcriptional regulator, LuxR family4e-0755.1
NC_015152:2887414:290545329054532906064612Spirochaeta sp. Buddy chromosome, complete genomeLuxR family transcriptional regulator9e-0857
NC_013947:656140:678880678880679542663Stackebrandtia nassauensis DSM 44728 chromosome, complete genometwo component transcriptional regulator, LuxR family2e-0652.8
NC_003155:7979050:798241379824137983084672Streptomyces avermitilis MA-4680, complete genometwo-component system response regulator3e-0755.5
NC_003888:4031299:403129940312994032045747Streptomyces coelicolor A3(2), complete genometwo-component system regulator2e-0859.3
NC_021177:2185898:220579222057922206481690Streptomyces fulvissimus DSM 40593, complete genomeTwo component transcriptional regulator, LuxR family9e-0857
NC_013929:8106492:811467981146798115350672Streptomyces scabiei 87.22 chromosome, complete genometwo-component response regulator5e-0754.7
NC_013929:1584906:160247616024761603150675Streptomyces scabiei 87.22 chromosome, complete genometwo component system response regulator6e-0651.2
NC_015953:4746983:477037547703754771031657Streptomyces sp. SirexAA-E chromosome, complete genomeLuxR family two component transcriptional regulator2e-1168.9
NC_015953:6212366:624157962415796242253675Streptomyces sp. SirexAA-E chromosome, complete genomeLuxR family two component transcriptional regulator4e-0961.6
NC_015953:2059083:207917620791762079865690Streptomyces sp. SirexAA-E chromosome, complete genomeLuxR family two component transcriptional regulator4e-0858.2
NC_018750:3741581:375803537580353758694660Streptomyces venezuelae ATCC 10712, complete genomeDNA-binding response regulator, LuxR family4e-0651.6
NC_018750:1591895:160845116084511609095645Streptomyces venezuelae ATCC 10712, complete genomeputative two-component system response regulator6e-1064.3
NC_015957:6859259:686881268688126869486675Streptomyces violaceusniger Tu 4113 chromosome, complete genomeLuxR family two component transcriptional regulator4e-0651.6
NC_015957:8569721:859217685921768592853678Streptomyces violaceusniger Tu 4113 chromosome, complete genomeLuxR family two component transcriptional regulator3e-0755.5
NC_013595:5176000:519685251968525197490639Streptosporangium roseum DSM 43021, complete genomeresponse regulator receiver protein8e-0857.4
NC_013595:196493:198184198184198825642Streptosporangium roseum DSM 43021, complete genomeresponse regulator receiver protein4e-0651.6
NC_013595:606096:619003619003619659657Streptosporangium roseum DSM 43021, complete genomeresponse regulator receiver protein3e-0652
NC_013595:3541012:354101235410123541677666Streptosporangium roseum DSM 43021, complete genomeresponse regulator receiver protein9e-0650.4
NC_013595:1851226:186206318620631862716654Streptosporangium roseum DSM 43021, complete genomeresponse regulator receiver protein8e-0753.9