Pre_GI Gene

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Host: NC_011593 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011593:2014787 Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This strain was isolated from human infant feces. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium longum is found in adult humans and formula fed infants as a normal component of gut flora.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
201478720160941308serine hydroxymethyltransferaseQuickGO ontologyBLASTP
201631820178081491threonine synthaseQuickGO ontologyBLASTP
201786920190141146hypothetical proteinBLASTP
20190172019466450regulatory protein GntRQuickGO ontologyBLASTP
20201232020836714hypothetical proteinBLASTP
20208392021552714hypothetical proteinBLASTP
20215592022479921ABC transporterQuickGO ontologyBLASTP
20225012022875375regulatory protein GntRQuickGO ontologyBLASTP
20234162024117702two component transcriptional regulator LuxR familyQuickGO ontologyBLASTP
202414920253751227Signal transduction histidine kinase-like proteinQuickGO ontologyBLASTP
202621920274631245major facilitator superfamily proteinQuickGO ontologyBLASTP
20275242028279756ExsB family proteinQuickGO ontologyBLASTP
20287072029354648HAD-superfamily hydrolaseQuickGO ontologyBLASTP
202935120311441794DNA repair protein RecNQuickGO ontologyBLASTP
203114420321601017inorganic polyphosphateATP-NAD kinaseQuickGO ontologyBLASTP
20324412033118678hypothetical proteinBLASTP
20331002033930831hemolysin AQuickGO ontologyBLASTP
203413020351701041HAD-superfamily hydrolaseQuickGO ontologyBLASTP
203517920367921614hypothetical proteinBLASTP
203682020381421323tyrosyl-tRNA synthetaseQuickGO ontologyBLASTP
20381692039059891hypothetical protein
20390322039565534metal dependent phosphohydrolaseQuickGO ontologyBLASTP