Pre_GI Gene

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Host: NC_011593 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011593:533884 Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This strain was isolated from human infant feces. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium longum is found in adult humans and formula fed infants as a normal component of gut flora.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
533228533887660two component transcriptional regulator LuxR familyQuickGO ontologyBLASTP
5338845351461263histidine kinase dimerisation and phosphoacceptor regionQuickGO ontologyBLASTP
535155535517363hypothetical protein
535539535937399hypothetical protein
5359685373921425hypothetical protein
537385538188804ABC transporterQuickGO ontologyBLASTP
538285538878594Protease II-like proteinQuickGO ontology
5390715417282658Lanthionine synthetase C family proteinQuickGO ontologyBLASTP
541791542534744two component transcriptional regulator LuxR familyQuickGO ontologyBLASTP
5425095438821374histidine kinase dimerisation and phosphoacceptor regionQuickGO ontologyBLASTP
5438965453321437hypothetical proteinBLASTP
545332546084753ABC transporterQuickGO ontologyBLASTP
5462555480061752ABC transporterQuickGO ontologyBLASTP
548030548458429hypothetical proteinBLASTP
548455548727273hypothetical proteinBLASTP
5487145503031590asparagine synthaseQuickGO ontologyBLASTP
550358550570213hypothetical proteinBLASTP
550658551266609ABC transporterQuickGO ontologyBLASTP
551474552181708two component transcriptional regulator LuxR familyQuickGO ontologyBLASTP
5521985535231326histidine kinase dimerisation and phosphoacceptor regionQuickGO ontologyBLASTP
553792554061270hypothetical proteinBLASTP
554721555263543hypothetical proteinBLASTP
555272555817546hypothetical proteinBLASTP
555801556742942ABC transporterQuickGO ontologyBLASTP
556739557527789hypothetical proteinBLASTP
557967558227261hypothetical protein
558309558920612phage integrase family proteinQuickGO ontologyBLASTP
558937559608672hypothetical proteinBLASTP
5596225608061185class I and II aminotransferaseQuickGO ontologyBLASTP
5608035624971695hypothetical proteinBLASTP
5624975637861290dehydrogenaseQuickGO ontologyBLASTP
563788564252465flavodoxinnitric oxide synthaseQuickGO ontologyBLASTP
5642455654591215major facilitator superfamily proteinQuickGO ontologyBLASTP
5654655666671203phosphoribosylglycinamide synthetaseQuickGO ontologyBLASTP
5666705679111242hypothetical proteinBLASTP
5682865696411356Integrase catalytic regionQuickGO ontologyBLASTP