Pre_GI: BLASTP Hits

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Query: NC_007492:857428:885641 Pseudomonas fluorescens PfO-1, complete genome

Start: 885641, End: 887335, Length: 1695

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012660:5793200:5793200579320057948941695Pseudomonas fluorescens SBW25 chromosome, complete genomeglycolate permease0842
NC_010501:734363:7673967673967690661671Pseudomonas putida W619, complete genomeL-lactate transport0801
NC_008027:775896:7976527976527993221671Pseudomonas entomophila L48, complete genomeL-lactate permease0801
NC_012560:4350465:4367732436773243694171686Azotobacter vinelandii DJ, complete genomeL-lactate permease, Lldp0702
NC_021150:4350461:4367728436772843694131686Azotobacter vinelandii CA6, complete genomeL-lactate permease, Lldp0702
NC_013353:3669500:3724066372406637257481683Escherichia coli O103:H2 str. 12009, complete genomeglycolate transporter0650
AP010958:3669500:3724066372406637257481683Escherichia coli O103:H2 str. 12009 DNA, complete genomeglycolate transporter0650
NC_004431:3513147:3534256353425635359381683Escherichia coli CFT073, complete genomeGlycolate permease glcA0649
NC_004741:3041294:3096365309636530979511587Shigella flexneri 2a str. 2457T, complete genomeputative permease4e-164578
NC_017328:3088907:3145297314529731468831587Shigella flexneri 2002017 chromosome, complete genomeputative permease4e-164578
NC_012759:3648500:3663748366374836654031656Escherichia coli BW2952 chromosome, complete genomeL-lactate permease1e-157557
NC_007606:3755155:3773192377319237748471656Shigella dysenteriae Sd197, complete genomeL-lactate permease3e-157555
NC_004337:3590323:3749997374999737516521656Shigella flexneri 2a str. 301, complete genomeL-lactate permease9e-157553
NC_004337:3049118:3107700310770031090971398Shigella flexneri 2a str. 301, complete genomeputative permease2e-148526
NC_016023:755237:7561647561647578371674Bacillus coagulans 36D1 chromosome, complete genomeL-lactate transport6e-115414
NC_008599:128431:1293281293281309231596Campylobacter fetus subsp. fetus 82-40, complete genomeglycolate permease GlcA1e-108393
NC_010505:2690939:2702858270285827045251668Methylobacterium radiotolerans JCM 2831, complete genomeL-lactate transport8e-105381
NC_016778:329288:3499103499103515471638Brucella canis HSK A52141 chromosome 1, complete sequenceL-lactate transporter3e-100366
NC_016795:1673464:1691584169158416932211638Brucella abortus A13334 chromosome 1, complete sequenceL-lactate transporter3e-99362
NC_013235:3913000:3916064391606439177641701Nakamurella multipartita DSM 44233, complete genomeL-lactate transport6e-90332
NC_008268:3418000:3420238342023834219381701Rhodococcus sp. RHA1, complete genomeL-lactate permease1e-79297
NC_010617:774914:8223208223208239181599Kocuria rhizophila DC2201, complete genomeputative L-lactate permease9e-79295
NC_015723:1486000:1515778151577815176041827Cupriavidus necator N-1 chromosome 2, complete sequenceglycolate permease GlcA6e-76285
NC_014318:2252417:2252417225241722540271611Amycolatopsis mediterranei U32 chromosome, complete genomelactate transporter, LctP family5e-72272
NC_017186:2252438:2252438225243822540481611Amycolatopsis mediterranei S699 chromosome, complete genomelactate transporter LctP family protein5e-72272
NC_013209:2476039:2491579249157924931711593Acetobacter pasteurianus IFO 3283-01, complete genomeL-lactate permease7e-61235
NC_017100:2476822:2492786249278624943781593Acetobacter pasteurianus IFO 3283-03, complete genomeL-lactate permease7e-61235
NC_017108:2474583:2490123249012324917151593Acetobacter pasteurianus IFO 3283-12, complete genomeL-lactate permease7e-61235
NC_017111:2474601:2490141249014124917331593Acetobacter pasteurianus IFO 3283-32, complete genomeL-lactate permease7e-61235
NC_017121:2474588:2490128249012824917201593Acetobacter pasteurianus IFO 3283-07, complete genomeL-lactate permease7e-61235
NC_017125:2476802:2492766249276624943581593Acetobacter pasteurianus IFO 3283-22, complete genomeL-lactate permease7e-61235
NC_017146:2476844:2492808249280824944001593Acetobacter pasteurianus IFO 3283-26, complete genomeL-lactate permease7e-61235
NC_017150:2383361:2399325239932524009171593Acetobacter pasteurianus IFO 3283-01-42C, complete genomeL-lactate permease7e-61235
NC_015566:1206500:1225335122533512268911557Serratia sp. AS12 chromosome, complete genomeL-lactate transport2e-48194
NC_015567:1206727:1225520122552012270761557Serratia sp. AS9 chromosome, complete genomeL-lactate transport2e-48194
NC_009617:3360990:3368164336816433696271464Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeL-lactate transport5e-48192
NC_015757:263938:2652522652522668561605Sulfobacillus acidophilus TPY chromosome, complete genomeL-lactate transport1e-47191
NC_016884:256598:2579122579122595161605Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeL-lactate permease1e-47191
NC_016776:1878791:1895561189556118970601500Bacteroides fragilis 638R, complete genomeputative L-lactate permease1e-43177
NC_003228:1870953:1891138189113818926371500Bacteroides fragilis NCTC 9343, complete genomeputative L-lactate permease2e-43177
NC_017317:944218:9593319593319609831653Corynebacterium ulcerans 809 chromosome, complete genomeL-lactate permease2e-37157
NC_015683:947048:9621629621629638141653Corynebacterium ulcerans BR-AD22 chromosome, complete genomeL-lactate permease2e-37157
NC_014329:844622:8800738800738817251653Corynebacterium pseudotuberculosis FRC41 chromosome, completeL-lactate permease3e-37156
NC_016781:844613:8800648800648817161653Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeL-lactate permease3e-37156
NC_017031:863093:8799148799148815661653Corynebacterium pseudotuberculosis P54B96 chromosome, completeL-lactate permease3e-37156
NC_017300:863898:8799698799698816211653Corynebacterium pseudotuberculosis 1002 chromosome, completeL-lactate permease3e-37156
NC_017301:863500:8796918796918813431653Corynebacterium pseudotuberculosis C231 chromosome, completeL-lactate permease3e-37156
NC_017303:863060:8798848798848815361653Corynebacterium pseudotuberculosis I19 chromosome, complete genomeL-lactate permease3e-37156
NC_017305:863072:8798968798968815481653Corynebacterium pseudotuberculosis PAT10 chromosome, completeL-lactate permease3e-37156
NC_016932:832748:8681858681858698371653Corynebacterium pseudotuberculosis 316 chromosome, complete genomeL-lactate permease4e-37156
NC_015145:3236445:3269253326925332709711719Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomeL-lactate transport5e-37155
NC_014643:535708:5527645527645544371674Rothia dentocariosa ATCC 17931 chromosome, complete genomeL-lactate transporter1e-35151
NC_003317:1263562:128163112816311282257627Brucella melitensis 16M chromosome I, complete sequenceL-LACTATE PERMEASE2e-34147
NC_009699:1122000:1130103113010311316261524Clostridium botulinum F str. Langeland chromosome, complete genomeL-lactate permease3e-27123
NC_012658:1052957:1069269106926910707921524Clostridium botulinum Ba4 str. 657 chromosome, complete genomeL-lactate permease4e-27123
NC_010723:1379256:1388238138823813897881551Clostridium botulinum E3 str. Alaska E43, complete genomeL-lactate permease2e-25117
NC_010674:1390473:1397041139704113985851545Clostridium botulinum B str. Eklund 17B, complete genomeL-lactate permease2e-25117
NC_017068:2786391:2801359280135928028971539Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative L-lactate permease3e-24113
NC_010520:1146000:1160234116023411617571524Clostridium botulinum A3 str. Loch Maree, complete genomeL-lactate permease6e-24112
NC_015214:1853106:1857751185775118592651515Lactobacillus acidophilus 30SC chromosome, complete genomeL-lactate permease7e-23109
NC_019792:3446895:3488561348856134903301770Natronobacterium gregoryi SP2 chromosome, complete genomeL-lactate permease2e-20100
NC_008710:621822:6352986352986368331536Borrelia turicatae 91E135, complete genomeL-lactate permease2e-1997.4
NC_013967:2103968:2108017210801721097111695Haloferax volcanii DS2 chromosome, complete genomeGlycolate permease glcA3e-1687.4
NC_004193:375416:3925683925683941571590Oceanobacillus iheyensis HTE831, complete genomeL-lactate permease1e-1481.6
NC_014210:397922:4001724001724020041833Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,L-lactate transport5e-1480.1
NC_014532:3596097:363482136348213635567747Halomonas elongata DSM 2581, complete genometransport protein (homolog to lactate permease)1e-1378.6
NC_015388:2211828:2226795222679522283001506Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeL-lactate permease6e-1376.3
NC_019974:3083899:3093813309381330955341722Natronococcus occultus SP4, complete genomeL-lactate permease1e-1275.5
NC_006138:2341975:2366958236695823687181761Desulfotalea psychrophila LSv54, complete genomeL-lactate permease3e-1273.9
NC_015930:1397524:1398668139866814002781611Lactococcus garvieae ATCC 49156, complete genomeL-lactate transporter protein2e-1171.2
NC_014532:3596097:3633859363385936348991041Halomonas elongata DSM 2581, complete genomeK03303 lactate transporter, LctP family3e-1170.5
NC_015276:565701:5657015657015672751575Marinomonas mediterranea MMB-1 chromosome, complete genomeL-lactate transport6e-0859.7
NC_010337:2950500:2968260296826029698281569Heliobacterium modesticaldum Ice1, complete genomel-lactate permease family protein, putative1e-0655.1