Pre_GI: BLASTP Hits

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Query: NC_007492:4310828:4334469 Pseudomonas fluorescens PfO-1, complete genome

Start: 4334469, End: 4335584, Length: 1116

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014924:3270547:3277340327734032784491110Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomepolysaccharide export protein5e-86318
NC_016147:1435000:1453924145392414550211098Pseudoxanthomonas spadix BD-a59 chromosome, complete genomepolysaccharide export protein1e-80300
NC_015567:1660462:1676480167648016776161137Serratia sp. AS9 chromosome, complete genomepolysaccharide export protein8e-68257
NC_015566:1659288:1676468167646816776041137Serratia sp. AS12 chromosome, complete genomepolysaccharide export protein8e-68257
NC_020064:1547524:1555311155531115564471137Serratia marcescens FGI94, complete genomeperiplasmic protein involved in polysaccharide export1e-67257
NC_014121:3483976:3507532350753235087641233Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completepolysaccharide export protein3e-66252
NC_016602:103878:1419501419501430861137Vibrio furnissii NCTC 11218 chromosome 1, complete sequencePeriplasmic protein involved in capsular polysaccharide export5e-66251
NC_020211:1704500:1712997171299717141331137Serratia marcescens WW4, complete genomelipoprotein required for capsular polysaccharide translocation through the outer membrane1e-65250
NC_016818:3887000:3907932390793239090651134Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeperiplasmic protein involved in polysaccharide export1e-65250
NC_016613:221476:2449942449942461301137Vibrio sp. EJY3 chromosome 1, complete sequencepolysaccharide export protein Wza1e-65250
NC_015633:461143:4635934635934647531161Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein1e-65250
NC_013850:1658010:1667064166706416682031140Klebsiella variicola At-22 chromosome, complete genomepolysaccharide export protein5e-65248
NC_009800:2156091:2175221217522121763571137Escherichia coli HS, complete genomepolysaccharide biosynthesis/export protein5e-65248
NC_013421:3279499:3305691330569133068271137Pectobacterium wasabiae WPP163, complete genomepolysaccharide export protein8e-65247
NC_012214:1588573:1592479159247915936211143Erwinia pyrifoliae Ep1/96, complete genomeexport outer membrane protein Wza (synonym for CpsH, similar to AmsH), involved in exopolysaccharid synthesis1e-64246
NC_011283:1690193:1699259169925917003921134Klebsiella pneumoniae 342 chromosome, complete genomecapsule polysaccharide biosynthesis/export protein GfcE4e-64245
NC_011566:1597751:1617896161789616189751080Shewanella piezotolerans WP3, complete genomePeriplasmic protein involved in capsular polysaccharide export9e-64244
NC_012691:3126500:3146464314646431477111248Tolumonas auensis DSM 9187, complete genomepolysaccharide export protein7e-64244
NC_014839:253961:2624842624842636231140Pantoea sp. At-9b plasmid pPAT9B02, complete sequencepolysaccharide export protein6e-64244
NC_012917:1506083:1513147151314715142831137Pectobacterium carotovorum subsp. carotovorum PC1, complete genomepolysaccharide export protein7e-63241
NC_020181:360500:3716303716303727661137Enterobacter aerogenes EA1509E, complete genomePolysaccharide export lipoprotein Wza7e-63241
NC_009832:1719149:1727572172757217287081137Serratia proteamaculans 568, complete genomepolysaccharide export protein1e-62240
NC_004547:1600900:1607969160796916091051137Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative polysaccharide export protein2e-62239
NC_005139:343500:3439443439443451761233Vibrio vulnificus YJ016 chromosome I, complete sequenceouter membrane capsular polysaccharide transport protein4e-62238
NC_014500:1491660:1499292149929215004281137Dickeya dadantii 3937 chromosome, complete genomecapsule polysaccharide export protein6e-62238
NC_021066:460292:4696784696784708141137Raoultella ornithinolytica B6, complete genomepolysaccharide export protein Wza9e-61234
NC_015061:3840463:3897283389728338984251143Rahnella sp. Y9602 chromosome, complete genomepolysaccharide export protein6e-61234
NC_017047:3936624:3958958395895839600911134Rahnella aquatilis HX2 chromosome, complete genomepolysaccharide export protein Wza5e-61234
NC_008570:3220539:3234098323409832352131116Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomecapsular polysaccharide transport protein2e-60233
NC_014121:1038554:1047714104771410488531140Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative polysaccharide export protein3e-60232
NC_007712:1601499:1612003161200316131391137Sodalis glossinidius str. 'morsitans', complete genomeamylovoran export outer membrane protein AmsH5e-60231
NC_011753:206178:2061782061782073141137Vibrio splendidus LGP32 chromosome 1, complete genomeputative periplasmic protein involved in capsular polysaccharide export (wza)6e-60231
NC_015663:4950000:5001409500140950025481140Enterobacter aerogenes KCTC 2190 chromosome, complete genomepolysaccharide export protein Wza6e-59228
NC_015061:3840463:3855601385560138567311131Rahnella sp. Y9602 chromosome, complete genomepolysaccharide export protein1e-55217
NC_004757:2451919:2468173246817324693901218Nitrosomonas europaea ATCC 19718, complete genomePolysaccharide export protein2e-55216
NC_016818:3851542:3867325386732538684551131Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeperiplasmic protein involved in polysaccharide export7e-55214
NC_011891:4931961:4931961493196149330671107Anaeromyxobacter dehalogenans 2CP-1, complete genomepolysaccharide export protein1e-53210
NC_007760:4911181:4914033491403349151391107Anaeromyxobacter dehalogenans 2CP-C, complete genomePolysaccharide export protein1e-53210
NC_011145:4960940:4960940496094049620461107Anaeromyxobacter sp. K, complete genomepolysaccharide export protein6e-53208
NC_017047:3907854:3922992392299239240171026Rahnella aquatilis HX2 chromosome, complete genomepolysaccharide export protein Wza1e-52207
NC_011001:1462532:1469947146994714711281182Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative polysaccharide export protein2e-47189
NC_015458:3390674:3393375339337533944931119Pusillimonas sp. T7-7 chromosome, complete genomepolysaccharide export protein3e-47189
NC_015723:1486000:1509706150970615108451140Cupriavidus necator N-1 chromosome 2, complete sequencepolysaccharide export outer membrane protein EpsA5e-47188
NC_015376:965000:9772579772579784261170Burkholderia gladioli BSR3 chromosome chromosome 2, completepolysaccharide export protein3e-46186
NC_012791:2052923:2058726205872620598441119Variovorax paradoxus S110 chromosome 1, complete genomepolysaccharide export protein7e-46184
NC_011662:1211660:1216366121636612176611296Thauera sp. MZ1T, complete genomepolysaccharide export protein1e-45184
NC_008781:3365468:3395688339568833968631176Polaromonas naphthalenivorans CJ2, complete genomepolysaccharide export protein3e-45182
NC_008781:3302934:3325841332584133270941254Polaromonas naphthalenivorans CJ2, complete genomepolysaccharide export protein6e-45181
NC_007952:2812996:2816075281607528171271053Burkholderia xenovorans LB400 chromosome 2, complete sequenceputative polysaccharide export, outer membrane protein, epsA2e-44179
NC_010676:61098:7086570865720371173Burkholderia phytofirmans PsJN chromosome 2, complete sequencepolysaccharide export protein5e-44178
NC_007489:42500:4544345443465251083Rhodobacter sphaeroides 2.4.1 plasmid C, complete sequencePolysaccharide export protein2e-43176
NC_007348:2115152:2149622214962221507971176Ralstonia eutropha JMP134 chromosome 2, complete sequencePolysaccharide export protein7e-43174
NC_013410:921187:9424569424569435801125Fibrobacter succinogenes subsp. succinogenes S85 chromosome,polysaccharide export protein1e-42174
NC_014931:5088125:5112099511209951131721074Variovorax paradoxus EPS chromosome, complete genomepolysaccharide export protein4e-41169
NC_010623:188143:2048552048552060271173Burkholderia phymatum STM815 chromosome 2, complete sequencepolysaccharide export protein1e-40167
NC_009254:1116174:1139689113968911408611173Burkholderia vietnamiensis G4 chromosome 3, complete sequencepolysaccharide export protein8e-41167
NC_016603:3181592:3184227318422731853271101Acinetobacter calcoaceticus PHEA-2 chromosome, complete genomepolysaccharide export protein4e-39162
NC_007952:1453000:1456808145680814578661059Burkholderia xenovorans LB400 chromosome 2, complete sequenceputative capsular polysaccharide transport outermembrane protein4e-35149
NC_009483:1936486:1936486193648619375291044Geobacter uraniireducens Rf4 chromosome, complete genomepolysaccharide export protein1e-25117
NC_015942:1167785:1191581119158111927081128Acidithiobacillus ferrivorans SS3 chromosome, complete genomepolysaccharide export protein1e-20101
NC_010170:2374852:2385033238503323861361104Bordetella petrii, complete genomeouter membrane protein involved in polysaccharide2e-20100
NC_015579:53500:6737167371685581188Novosphingobium sp. PP1Y plasmid Lpl, complete sequencepolysaccharide export protein1e-1997.8
NC_011761:2641481:2665813266581326669851173Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completecapsule polysaccharide export protein, BexD/CtrA/VexA family7e-1995.1
NC_011206:2549132:2565631256563125668241194Acidithiobacillus ferrooxidans ATCC 53993, complete genomepolysaccharide export protein8e-1995.1
NC_013422:1604157:1607943160794316091691227Halothiobacillus neapolitanus c2, complete genomepolysaccharide export protein5e-1892.4
NC_010814:1551624:1612640161264016138331194Geobacter lovleyi SZ, complete genomepolysaccharide export protein2e-1790.5
NC_006350:3329477:3355330335533033564931164Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative capsular polysaccharide biosynthesis/export protein4e-1789.4
NC_006348:2372945:2398798239879823999611164Burkholderia mallei ATCC 23344 chromosome 1, complete sequencecapsular polysaccharide biosynthesis/export periplasmic protein4e-1789.4
NC_007434:3588081:3613934361393436150971164Burkholderia pseudomallei 1710b chromosome I, complete sequenceWcbC4e-1789.4
NC_008836:1072721:1098574109857410997101137Burkholderia mallei NCTC 10229 chromosome II, complete sequencecapsular polysaccharide biosynthesis/export periplasmic protein5e-1789
NC_014664:2669562:2686003268600326871571155Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomepolysaccharide export protein7e-1788.6
NC_009074:3163362:3189215318921531903361122Burkholderia pseudomallei 668 chromosome I, complete sequencecapsular polysaccharide biosynthesis/export periplasmic protein7e-1788.6
NC_008785:516500:5238395238395249601122Burkholderia mallei SAVP1 chromosome II, complete sequencecapsular polysaccharide biosynthesis/export periplasmic protein7e-1788.6
NC_009076:3179662:3205515320551532066361122Burkholderia pseudomallei 1106a chromosome I, complete sequencecapsular polysaccharide biosynthesis/export periplasmic protein7e-1788.6
NC_009080:2123987:2149840214984021509611122Burkholderia mallei NCTC 10247 chromosome II, complete sequencecapsular polysaccharide biosynthesis/export periplasmic protein7e-1788.6
NC_010508:809974:8189278189278200661140Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencepolysaccharide export protein6e-1788.6
NC_007510:759905:7685677685677697631197Burkholderia sp. 383 chromosome 1, complete sequencePolysaccharide export protein9e-1788.2
NC_017033:3013654:3022942302294230241081167Frateuria aurantia DSM 6220 chromosome, complete genomeperiplasmic protein involved in polysaccharide export2e-1687
NC_009512:4375452:4385739438573943868031065Pseudomonas putida F1, complete genomepolysaccharide export protein3e-1686.3
NC_007512:1539095:1547465154746515485531089Pelodictyon luteolum DSM 273, complete genomecapsular polysaccharide export protein, putative5e-1685.9
NC_010084:2822295:2840783284078328419131131Burkholderia multivorans ATCC 17616 chromosome 1, completepolysaccharide export protein1e-1584.3
NC_014006:2999500:3003484300348430047011218Sphingobium japonicum UT26S chromosome 1, complete genomepolysaccharide export outer membrane protein1e-1584.3
NC_010804:671081:6828936828936839901098Burkholderia multivorans ATCC 17616 chromosome 1, completepolysaccharide export outer membrane protein2e-1584
NC_008639:2702662:2722785272278527238761092Chlorobium phaeobacteroides DSM 266, complete genomepolysaccharide export protein2e-1583.6
NC_015381:766355:7773387773387785221185Burkholderia gladioli BSR3 chromosome 1, complete sequencePolysaccharide export protein5e-1582.4
NC_008542:855347:8648308648308660591230Burkholderia cenocepacia HI2424 chromosome 1, complete sequencepolysaccharide export protein6e-1582
NC_008060:306170:3156563156563168851230Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencepolysaccharide export protein6e-1582
NC_020453:3179346:3194438319443831956191182Agromonas oligotrophica S58 DNA, complete genomecapsule polysaccharide export outer membrane protein1e-1480.9
NC_011000:3514338:3550131355013135513031173Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative capsular polysaccharide biosynthesis/export protein2e-1480.1
NC_005296:3783348:3803244380324438044641221Rhodopseudomonas palustris CGA009, complete genomeputative capsule polysaccharide export outer membrane protein8e-1478.2
NC_011004:4045277:4065182406518240663901209Rhodopseudomonas palustris TIE-1, complete genomepolysaccharide export protein1e-1377.4
NC_010125:2483122:2502401250240125036121212Gluconacetobacter diazotrophicus PAl 5, complete genomeputative polysaccharide export protein2e-1377
NC_012918:2896671:289823428982342899040807Geobacter sp. M21 chromosome, complete genomepolysaccharide export protein3e-1376.6
NC_017515:76861:8319083190843651176Neisseria meningitidis M04-240196 chromosome, complete genomecapsule polysaccharide export outer membrane protein CtrA4e-1375.9
NC_010483:273080:2730802730802760582979Thermotoga sp. RQ2, complete genomepolysaccharide export protein8e-1375.1
NC_011146:1998981:204007820400782040884807Geobacter bemidjiensis Bem, complete genomepolysaccharide export protein, PEP-CTERM sytem-associated2e-1273.6
NC_017512:2161000:2173040217304021742031164Neisseria meningitidis WUE 2594, complete genomecapsule export outer-membrane lipoprotein CtrA2e-1273.6
NC_014654:646500:6590596590596601771119Halanaerobium sp. 'sapolanicus' chromosome, complete genomepolysaccharide export protein4e-1272.8
NC_011365:738321:7558257558257569851161Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomepolysaccharide export protein2e-1170.5
NC_010682:1234769:1248347124834712495131167Ralstonia pickettii 12J chromosome 1, complete sequencepolysaccharide export protein3e-1170.1
NC_007517:2241104:227177222717722272620849Geobacter metallireducens GS-15, complete genomePolysaccharide export protein3e-1170.1
NC_016027:2047954:2094974209497420963411368Gluconacetobacter xylinus NBRC 3288, complete genomecapsule polysaccharide export protein2e-1067.4
NC_012108:2194251:221851722185172219101585Desulfobacterium autotrophicum HRM2, complete genomeperiplasmic polysaccharide export protein4e-1066.2
NC_011769:820521:831222831222832028807Desulfovibrio vulgaris str. 'Miyazaki F', complete genomepolysaccharide export protein, PEP-CTERM sytem-associated4e-1066.2
NC_010524:3914880:392341439234143924055642Leptothrix cholodnii SP-6, complete genomepolysaccharide export protein1e-0964.7
NC_007514:904565:921085921085921897813Chlorobium chlorochromatii CaD3, complete genomePeriplasmic protein involved in polysaccharide export-like1e-0964.7
NC_016027:2047954:2057366205736620586731308Gluconacetobacter xylinus NBRC 3288, complete genomecapsule polysaccharide export protein1e-0964.3
NC_012559:768939:7946657946657956901026Laribacter hongkongensis HLHK9, complete genomePutative capsular polysaccharide export protein2e-0963.5
NC_007759:415456:442261442261442977717Syntrophus aciditrophicus SB, complete genomeperiplasmic protein involved in polysaccharide export4e-0962.8
NC_008228:1404126:141159914115991412234636Pseudoalteromonas atlantica T6c, complete genomepolysaccharide export protein5e-0962.4
NC_010162:1222000:123966912396691240280612Sorangium cellulosum 'So ce 56', complete genomeouter membrane polysaccharide exporter6e-0962
NC_011978:15059:1505915059178692811Thermotoga neapolitana DSM 4359, complete genomePolysaccharide export protein6e-0962
NC_007298:2568851:258422125842212584844624Dechloromonas aromatica RCB, complete genomePolysaccharide export protein1e-0861.2
NC_015976:1064888:1069660106966010707991140Sphingobium sp. SYK-6, complete genomeputative capsule polysaccharide export outer membrane protein3e-0860.1
NC_015554:817500:824730824730825365636Alteromonas sp. SN2 chromosome, complete genomepolysaccharide biosynthesis/export protein3e-0859.7
NC_006677:1596560:1623351162335116245591209Gluconobacter oxydans 621H, complete genomeCapsule polysaccharide export protein3e-0859.7
NC_005125:3446470:3445476344547634465401065Gloeobacter violaceus PCC 7421, complete genomehypothetical protein5e-0858.9
NC_007645:2779381:278535327853532785991639Hahella chejuensis KCTC 2396, complete genomePeriplasmic protein involved in polysaccharide export1e-0758.2
NC_013960:3326955:333881833388183339459642Nitrosococcus halophilus Nc4 chromosome, complete genomepolysaccharide export protein, PEP-CTERM sytem-associated1e-0758.2
NC_017082:6444522:6507989650798965091821194Bradyrhizobium sp. S23321, complete genomepolysaccharide export protein1e-0757.8
NC_018679:3197347:321778332177833218415633Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completepolysaccharide biosynthesis/export protein1e-0757.4
NC_000853:648075:6700826700826730602979Thermotoga maritima MSB8, complete genomepolysaccharide export protein, putative2e-0757
NC_015707:1614598:1634224163422416371302907Thermotoga thermarum DSM 5069 chromosome, complete genomepolysaccharide export protein3e-0756.6
NC_010995:4083960:410362141036214104214594Cellvibrio japonicus Ueda107, complete genomePolysaccharide biosynthesis/export protein3e-0756.6
NC_012969:1931595:1947273194727319483281056Methylovorus glucosetrophus SIP3-4 chromosome, complete genomepolysaccharide export protein EpsE5e-0755.8
NC_005125:3981987:3990396399039639914841089Gloeobacter violaceus PCC 7421, complete genomehypothetical protein5e-0755.8
NC_012968:1945614:196696719669671967761795Methylotenera mobilis JLW8, complete genomepolysaccharide export protein EpsE5e-0755.8
NC_014315:1956695:196631119663111966937627Nitrosococcus watsoni C-113 chromosome, complete genomepolysaccharide export protein6e-0755.5
NC_015422:704500:712290712290712931642Alicycliphilus denitrificans K601 chromosome, complete genomepolysaccharide export protein6e-0755.5
NC_014910:755192:772970772970773611642Alicycliphilus denitrificans BC chromosome, complete genomepolysaccharide export protein, pep-cterm sytem-associated6e-0755.5
NC_014355:2321957:235048923504892351100612Candidatus Nitrospira defluvii, complete genomeputative polysaccharide export protein (fragment)8e-0755.1
NC_017030:3668146:368615136861513686720570Corallococcus coralloides DSM 2259 chromosome, complete genomepolysaccharide biosynthesis/export protein1e-0654.7
NC_015572:1421782:144349314434931444209717Methylomonas methanica MC09 chromosome, complete genomepolysaccharide export protein1e-0654.7
NC_015873:924392:926797926797927453657Megasphaera elsdenii DSM 20460, complete genomepolysaccharide export protein1e-0654.3
NC_013889:2603914:261983126198312620469639Thioalkalivibrio sp. K90mix chromosome, complete genomepolysaccharide export protein1e-0654.3
NC_014935:1704816:173602917360291736760732Nitratifractor saLSUginis DSM 16511 chromosome, complete genomepolysaccharide export protein1e-0654.3
NC_018868:1960542:199578919957891996400612Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomepolysaccharide biosynthesis/export protein3e-0653.1
NC_012125:4559990:4564832456483245658991068Salmonella enterica subsp. enterica serovar Paratyphi C strainVi polysaccharide export protein3e-0653.1
NC_004631:4494000:4499011449901145000781068Salmonella enterica subsp. enterica serovar Typhi Ty2, completeVi polysaccharide export protein4e-0652.8
NC_003198:4513900:4515425451542545164921068Salmonella enterica subsp. enterica serovar Typhi str. CT18,Vi polysaccharide export protein4e-0652.8
NC_016832:4482437:4487279448727944883461068Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Vi polysaccharide export protein vexA/tviF4e-0652.8
NC_015497:3739556:376355437635543764189636Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomepolysaccharide export protein4e-0652.8
NC_004460:1718088:173668917366891737180492Vibrio vulnificus CMCP6 chromosome II, complete sequencePeriplasmic protein involved in polysaccharide export6e-0652.4
NC_005140:444353:461990461990462523534Vibrio vulnificus YJ016 chromosome II, complete sequenceputative polysaccharide export-related protein6e-0652.4
NC_012108:2874831:291670629167062917500795Desulfobacterium autotrophicum HRM2, complete genomeGumA7e-0652
NC_009654:866124:8720588720588746672610Marinomonas sp. MWYL1, complete genomepolysaccharide export protein8e-0651.6
NC_017068:1788235:181607218160721816791720Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative polysaccharide export protein9e-0651.6