Pre_GI Gene

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Host: NC_007952 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007952:1453000 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
145347114549941524Mannose-1-phosphateguanylyltransferasemannose- 6- phosphate isomeraseQuickGO ontologyBLASTP
145504214564211380Putative sugar transferaseQuickGO ontologyBLASTP
145680814578661059putative capsular polysaccharide transport outermembrane proteinQuickGO ontologyBLASTP
14578631458306444Putative protein tyrosine phosphataseQuickGO ontologyBLASTP
145832014605602241Exopolysaccharide transport proteinQuickGO ontologyBLASTP
14605571461492936Putative rhamnosyltransferaseQuickGO ontologyBLASTP
14615021461780279hypothetical protein
146177714630691293hypothetical proteinBLASTP
14630701464023954hypothetical proteinBLASTP
146402714651211095GlycosyltransferaseQuickGO ontologyBLASTP
146512114662571137Putative glycosyltransferase CpsGQuickGO ontologyBLASTP
146628214675261245hypothetical proteinBLASTP
146752314690491527hypothetical proteinBLASTP
14691081469680573hypothetical protein
14696191470437819hypothetical protein
14704581471351894Glucose-1-phosphate thymidylyltransferase longformQuickGO ontologyBLASTP
147136214724231062dTDP-glucose 46-dehydrataseQuickGO ontologyBLASTP
147281314738981086Two component transcriptional regulator LuxR familyQuickGO ontologyBLASTP
147389114774123522Periplasmic sensor hybrid histidine kinaseQuickGO ontologyBLASTP
147760514788701266ABC branched chain amino acid family transporter periplasmic ligand binding proteinQuickGO ontologyBLASTP
14789451479862918ABC branched chain amino acid family transporter inner membrane subunitQuickGO ontologyBLASTP