Pre_GI: BLASTP Hits

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Query: NC_005126:1265071:1266672 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 1266672, End: 1266932, Length: 261

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012880:3915500:393652639365263936789264Dickeya dadantii Ech703, complete genomeputative transcriptional regulator, Nlp4e-23106
NC_014500:894136:906023906023906268246Dickeya dadantii 3937 chromosome, complete genometranscriptional regulator5e-23106
NC_013421:701005:750806750806751027222Pectobacterium wasabiae WPP163, complete genomeputative transcriptional regulator, Nlp1e-22105
NC_012880:3748665:375661837566183756890273Dickeya dadantii Ech703, complete genomeputative transcriptional regulator, Nlp1e-22105
NC_004547:1062410:107489010748901075132243Erwinia carotovora subsp. atroseptica SCRI1043, complete genometranscriptional regulator1e-22105
NC_013592:956829:975937975937976158222Dickeya dadantii Ech586, complete genomeputative transcriptional regulator, Nlp2e-22104
NC_014500:1066911:108564110856411085868228Dickeya dadantii 3937 chromosome, complete genomeputative regulator for maltose metabolism1e-22104
NC_012917:3378759:338411533841153384330216Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeputative transcriptional regulator, Nlp4e-22103
NC_016845:4498097:451313245131324513392261Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,transcriptional regulator Nlp5e-22102
NC_020063:1051310:105732610573261057580255Enterobacteriaceae bacterium strain FGI 57, complete genomeputative transcriptional regulator6e-22102
NC_014228:3282500:331666433166643316930267Xenorhabdus nematophila ATCC 19061, complete genomeSugar fermentation stimulation protein B (Ner-like protein)9e-22102
NC_013421:1819036:184323518432351843615381Pectobacterium wasabiae WPP163, complete genomeputative transcriptional regulator, Nlp2e-21101
NC_016845:4498097:451548245154824515733252Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,transcriptional regulator Nlp2e-21101
NC_012880:3982383:399572939957293995977249Dickeya dadantii Ech703, complete genome1e-21101
NC_005810:1230976:123355212335521233854303Yersinia pestis biovar Microtus str. 91001, complete genomeputative regulator4e-21100
NC_004088:1265730:128054012805401280842303Yersinia pestis KIM, complete genomeregulator4e-21100
NC_014228:3391500:339434533943453394614270Xenorhabdus nematophila ATCC 19061, complete genomeSugar fermentation stimulation protein B (Ner-like protein)4e-21100
NC_012912:1701231:173017617301761730448273Dickeya zeae Ech1591, complete genomeputative transcriptional regulator, Nlp4e-21100
NC_014500:3519722:353207735320773532292216Dickeya dadantii 3937 chromosome, complete genomeputative regulator for maltose metabolism2e-21100
NC_013282:551219:574205574205574480276Cronobacter turicensis, complete genomeSugar fermentation stimulation protein B2e-21100
NC_012880:3748665:377718637771863777431246Dickeya dadantii Ech703, complete genomeputative transcriptional regulator, Nlp5e-2199.8
NC_003197:2870268:288882428888242889108285Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein6e-2199.4
NC_009648:3224495:324306232430623243346285Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative cytoplasmic protein6e-2199.4
NC_011083:2847318:286333028633302863614285Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,regulator for maltose metabolism6e-2199.4
NC_016810:2871689:291139029113902911674285Salmonella enterica subsp. enterica serovar Typhimurium strregulator for maltose metabolism6e-2199.4
NC_016856:2896630:290904929090492909333285Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein6e-2199.4
NC_016857:2871689:291139029113902911674285Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein6e-2199.4
NC_016860:2896254:291239029123902912674285Salmonella enterica subsp. enterica serovar Typhimurium strmaltose metabolism regulator6e-2199.4
NC_016863:2844883:285730228573022857586285Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein6e-2199.4
NC_017046:2896651:291013129101312910415285Salmonella enterica subsp. enterica serovar Typhimurium str. 798regulator for maltose metabolism6e-2199.4
NC_016818:859181:877253877253877534282Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative transcriptional regulator6e-2199.4
NC_010067:3204682:321061132106113210832222Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein8e-2199
NC_013892:1483000:149894614989461499230285Xenorhabdus bovienii SS-2004 chromosome, complete genometranscriptional activator of maltose metabolism8e-2199
NC_014228:3391500:342080434208043421088285Xenorhabdus nematophila ATCC 19061, complete genomesugar fermentation stimulation protein B (Ner-like protein)8e-2199
NC_014618:4114004:411814141181414118395255Enterobacter cloacae SCF1 chromosome, complete genometranscriptional regulator Nlp8e-2199
NC_013892:3278647:329793132979313298215285Xenorhabdus bovienii SS-2004 chromosome, complete genometranscriptional activator of maltose metabolism7e-2199
NC_003198:4513900:453731245373124537533222Salmonella enterica subsp. enterica serovar Typhi str. CT18,transcriptional regulatory protein7e-2199
NC_017168:2626996:264186326418632642108246Yersinia pestis A1122 chromosome, complete genomeputative regulator1e-2098.6
NC_003143:3115933:312031631203163120561246Yersinia pestis CO92, complete genomeputative DNA-binding protein1e-2098.6
NC_008150:2822689:282658828265882826833246Yersinia pestis Antiqua, complete genomeputative DNA-binding protein1e-2098.6
NC_008149:1195614:121048112104811210726246Yersinia pestis Nepal516, complete genomeDNA-binding protein1e-2098.6
NC_014618:1103239:112429011242901124538249Enterobacter cloacae SCF1 chromosome, complete genometranscriptional regulator Nlp2e-2097.8
NC_020260:3355814:337700333770033377293291Cronobacter sakazakii Sp291, complete genomesugar fermentation stimulation protein B2e-2097.8
NC_013961:441719:475545475545475874330Erwinia amylovora, complete genomeSugar fermentation stimulation protein B6e-2096.3
NC_016818:3887000:391724339172433917500258Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative transcriptional regulator6e-2095.9
NC_014228:3391500:340251634025163402776261Xenorhabdus nematophila ATCC 19061, complete genomesugar fermentation stimulation protein (Ner-like protein) (fragment)7e-2095.9
NC_014500:443874:462414462414462680267Dickeya dadantii 3937 chromosome, complete genomeputative regulator for maltose metabolism1e-1995.1
NC_012880:4117376:411737641173764117642267Dickeya dadantii Ech703, complete genomeputative transcriptional regulator, Nlp1e-1995.1
NC_013592:4295449:429793042979304298196267Dickeya dadantii Ech586, complete genomeputative transcriptional regulator, Nlp1e-1995.1
NC_012912:4194821:419513241951324195398267Dickeya zeae Ech1591, complete genomeputative transcriptional regulator, Nlp1e-1994.7
NC_012917:4646491:465410646541064654363258Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeputative transcriptional regulator, Nlp1e-1994.7
NC_014500:4691915:469834046983404698597258Dickeya dadantii 3937 chromosome, complete genomeputative regulator for maltose metabolism3e-1994
NC_013592:4511478:453214945321494532406258Dickeya dadantii Ech586, complete genomeputative transcriptional regulator, Nlp3e-1993.6
NC_014500:3097362:313990431399043140215312Dickeya dadantii 3937 chromosome, complete genomeputative regulator for maltose metabolism4e-1993.2
NC_012214:474359:492274492274492603330Erwinia pyrifoliae Ep1/96, complete genomesugar fermentation stimulation protein B4e-1993.2
NC_014500:3097362:314118531411853141490306Dickeya dadantii 3937 chromosome, complete genomeputative regulator for maltose metabolism7e-1992.4
NC_012912:1701231:171672517167251717012288Dickeya zeae Ech1591, complete genomeputative transcriptional regulator, Nlp5e-1889.7
NC_014228:3282500:328505932850593285277219Xenorhabdus nematophila ATCC 19061, complete genomePutatiave helix-turn-helix regulatory protein5e-1682.8
NC_013716:5201097:521703852170385217226189Citrobacter rodentium ICC168, complete genomehypothetical protein2e-1477.8
NC_021066:3201500:321518432151843215456273Raoultella ornithinolytica B6, complete genomehypothetical protein1e-1375.1
NC_020063:2785652:279681027968102797070261Enterobacteriaceae bacterium strain FGI 57, complete genomeputative transcriptional regulator1e-1375.1