Pre_GI: BLASTP Hits

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Query: NC_004547:1873390:1881482 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1881482, End: 1882006, Length: 525

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017047:2079368:208488220848822085808927Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein2e-36152
NC_013592:1668092:167299016729901673916927Dickeya dadantii Ech586, complete genomehypothetical protein1e-28125
NC_012912:1701231:172714717271471728073927Dickeya zeae Ech1591, complete genomehypothetical protein3e-28124
NC_014500:3097362:312943531294353130361927Dickeya dadantii 3937 chromosome, complete genomehypothetical protein7e-28123
NC_013421:1819036:184201518420151842929915Pectobacterium wasabiae WPP163, complete genomehypothetical protein3e-25114
NC_011283:1811000:185368618536861854603918Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein4e-25114
NC_013592:2968500:299268229926822993596915Dickeya dadantii Ech586, complete genomehypothetical protein6e-22103
NC_012731:3411161:342715534271553428081927Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein1e-21102
NC_016845:3448881:346487434648743465800927Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein2e-21101
NC_006155:1916426:191752119175211918447927Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein2e-21101
NC_010634:1916000:191750519175051918431927Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein2e-21101
NC_009381:1362471:139660513966051397159555Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-1374.7
NC_004088:2640440:267720426772042677758555Yersinia pestis KIM, complete genomehypothetical protein2e-1374.7
NC_003143:2137945:213904021390402139594555Yersinia pestis CO92, complete genomehypothetical protein2e-1374.7
NC_008150:1420825:142211914221191422673555Yersinia pestis Antiqua, complete genomehypothetical protein2e-1374.7
NC_011274:1129686:115210211521021152479378Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein3e-1374.3
NC_005810:1794490:179578417957841796338555Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein5e-1373.9
NC_016831:1865681:187268518726851873002318Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein6e-1167
NC_011205:1227373:123879112387911239108318Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein6e-1167
NC_011149:1110642:112497711249771125294318Salmonella enterica subsp. enterica serovar Agona str. SL483,7e-1166.6