Pre_GI: BLASTP Hits

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Query: NC_004337:3590323:3823522 Shigella flexneri 2a str. 301, complete genome

Start: 3823522, End: 3825264, Length: 1743

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated in 1984 from a patient in Beijing, China. It is similar to pathogenic Escherichia coli except for the more numerous insertion sequences and contains a virulence plasmid (pCP301). Causes enteric disease. Shigella This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011745:4862218:4862218486221848639601743Escherichia coli ED1a chromosome, complete genomeAerobactin siderophore biosynthesis protein01199
NC_011751:3453683:3487827348782734895691743Escherichia coli UMN026 chromosome, complete genomeAerobactin siderophore biosynthesis protein01195
NC_004431:3409389:3464728346472834664701743Escherichia coli CFT073, complete genomeIucC protein01195
NC_016860:3995445:4018107401810740198491743Salmonella enterica subsp. enterica serovar Typhimurium strIucC01172
NC_009837:127000:1450021450021467591758Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM, complete sequenceIucC01172
NC_008150:317903:3161583161583179061749Yersinia pestis Antiqua, complete genomeputative siderophore biosynthesis protein IucC0779
NC_010465:868402:8912428912428929901749Yersinia pseudotuberculosis YPIII, complete genomeIucA/IucC family protein0779
NC_005810:3917254:3917254391725439190021749Yersinia pestis biovar Microtus str. 91001, complete genomeputative siderophore biosynthesis protein IucC0779
NC_017154:902739:9009949009949027421749Yersinia pestis D106004 chromosome, complete genomeputative siderophore biosynthesis protein IucC0779
NC_017168:3286:3286328650341749Yersinia pestis A1122 chromosome, complete genomeputative siderophore biosynthesis protein IucC0779
NC_009708:853063:8720918720918738391749Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeaerobactin siderophore biosynthesis protein IucC0779
NC_006155:3846315:3846315384631538480631749Yersinia pseudotuberculosis IP 32953, complete genomeputative siderophore biosynthesis protein IucC0777
NC_014315:1396990:1406341140634114080771737Nitrosococcus watsoni C-113 chromosome, complete genomeIucA/IucC family protein6e-91335
NC_007484:2045500:2052049205204920537851737Nitrosococcus oceani ATCC 19707, complete genomeSiderophore synthetase component, IucA/IucC2e-89330
NC_010474:19256:2340423404258452442Synechococcus sp. PCC 7002 plasmid pAQ7, complete sequenceSiderophore biosynthesis protein, IucA / IucC family1e-83310
NC_016113:1312052:1312052131205213138391788Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequenceNocardamine synthetase2e-68261
NC_017223:2618535:2624413262441326262691857Bordetella pertussis CS chromosome, complete genomealcaligin biosynthesis protein3e-64246
NC_002929:2589202:2599777259977726016331857Bordetella pertussis Tohama I, complete genomealcaligin biosynthesis protein3e-64246
NC_002928:3715492:3722313372231337241691857Bordetella parapertussis 12822, complete genomealcaligin biosynthesis protein4e-64246
NC_002927:4130697:4137580413758041394361857Bordetella bronchiseptica RB50, complete genomealcaligin biosynthesis protein4e-64246
NC_015572:3723498:3740822374082237426901869Methylomonas methanica MC09 chromosome, complete genomeIucA/IucC family protein4e-57223
NC_016641:4151403:4171807417180741736961890Paenibacillus terrae HPL-003 chromosome, complete genomeachromobactin biosynthetic protein AcsC9e-49195
NC_011894:7035285:7038352703835270418133462Methylobacterium nodulans ORS 2060, complete genomeIucA/IucC family protein7e-33142
NC_015683:1146913:1161192116119211645783387Corynebacterium ulcerans BR-AD22 chromosome, complete genomesiderophore biosynthesis-like protein2e-20101
NC_017317:1143378:1158342115834211617283387Corynebacterium ulcerans 809 chromosome, complete genomesiderophore biosynthesis related protein5e-2099.8
NC_016932:1041306:1058415105841510618043390Corynebacterium pseudotuberculosis 316 chromosome, complete genomeSiderophore biosynthesis related protein2e-1998.2
NC_014329:1041556:1066800106680010701893390Corynebacterium pseudotuberculosis FRC41 chromosome, completesiderophore biosynthesis related protein2e-1997.8
NC_017031:1039548:1066623106662310700123390Corynebacterium pseudotuberculosis P54B96 chromosome, completeSiderophore biosynthesis related protein2e-1997.8
NC_017300:1045555:1064273106427310676623390Corynebacterium pseudotuberculosis 1002 chromosome, completeSiderophore biosynthesis related protein2e-1997.8
NC_017301:1037519:1066436106643610698253390Corynebacterium pseudotuberculosis C231 chromosome, completeSiderophore biosynthesis related protein2e-1997.8
NC_017303:1039562:1066637106663710700263390Corynebacterium pseudotuberculosis I19 chromosome, complete genomeSiderophore biosynthesis related protein2e-1997.8
NC_017305:1037133:1064208106420810675973390Corynebacterium pseudotuberculosis PAT10 chromosome, completeSiderophore biosynthesis related protein2e-1997.8
NC_016781:1039716:1066791106679110701803390Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeSiderophore biosynthesis related protein2e-1997.8
NC_008245:24652:2837328373302921920Francisella tularensis subsp. tularensis FSC 198, complete genomehypothetical protein7e-1892.8
NC_006570:24636:2835728357302761920Francisella tularensis subsp. tularensis Schu 4, complete genomehypothetical protein7e-1892.8
NC_016933:24654:2837528375302941920Francisella tularensis TIGB03 chromosome, complete genomeSiderophore synthetase superfamily group B7e-1892.8
NC_016937:24654:2837528375302941920Francisella tularensis subsp. tularensis TI0902 chromosome,Siderophore synthetase superfamily group B7e-1892.8
NC_009257:109528:1132491132491151681920Francisella tularensis subsp. tularensis WY96-3418 chromosome,IucA/IucC family siderophore biosynthesis protein7e-1892.8
NC_010677:96470:1001911001911021101920Francisella tularensis subsp. mediasiatica FSC147, complete genomesiderophore biosynthesis protein7e-1892.4
NC_010465:868402:8939218939218956931773Yersinia pseudotuberculosis YPIII, complete genomeIucA/IucC family protein4e-1583.6
NC_010465:893921:8939218939218956931773Yersinia pseudotuberculosis YPIII, complete genomeIucA/IucC family protein4e-1583.6
NC_009708:853063:8747708747708765421773Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeaerobactin siderophore biosynthesis protein IucA4e-1583.6
NC_009708:874770:8747708747708765421773Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeaerobactin siderophore biosynthesis protein IucA4e-1583.6
NC_009837:127000:1476921476921494731782Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM, complete sequenceIucA3e-1480.5
NC_011747:11532:1153211532133191788Escherichia coli S88 plasmid pECOS88, complete sequenceAerobactin siderophore biosynthesis protein IucA4e-1480.1
CP002797:4812799:4812799481279948145231725Escherichia coli NA114, complete genomeCitrate:6-N-acetyl-6-N-hydroxy-L-lysine ligase, alpha subunit, aerobactin biosynthesis protein / Siderophore synthetase superfamily, group A / Siderop2e-1377.8
NC_004337:3590323:3820793382079338225741782Shigella flexneri 2a str. 301, complete genomesiderophore biosynthesis protein2e-1377.4
NC_011745:4862218:4864908486490848666981791Escherichia coli ED1a chromosome, complete genomeaerobactin siderophore biosynthesis protein2e-1377.4
NC_004431:3409389:3467418346741834692051788Escherichia coli CFT073, complete genomeIucA protein2e-1377.4
NC_011751:3453683:3490517349051734923041788Escherichia coli UMN026 chromosome, complete genomeaerobactin siderophore biosynthesis protein2e-1377.4
NC_010474:19256:2902429024308681845Synechococcus sp. PCC 7002 plasmid pAQ7, complete sequenceSiderophore biosynthesis protein6e-1376.3
NC_014315:1396990:1403828140382814063442517Nitrosococcus watsoni C-113 chromosome, complete genomeIucA/IucC family protein3e-1273.9
NC_007484:2045500:2054613205461320562951683Nitrosococcus oceani ATCC 19707, complete genomeSiderophore synthetase component, IucA/IucC3e-1273.9
NC_005966:2110549:2113412211341221152081797Acinetobacter sp. ADP1, complete genomeputative siderophore biosynthesis protein8e-1272.4
NC_015673:525638:5389105389105428303921Corynebacterium resistens DSM 45100 chromosome, complete genomesiderophore biosynthesis protein1e-1172
NC_016641:4151403:4169855416985541718161962Paenibacillus terrae HPL-003 chromosome, complete genomesiderophore synthetase component protein, siderophore-iron transmembrane transporter7e-1169.3
NC_011894:7035285:7035285703528570370481764Methylobacterium nodulans ORS 2060, complete genomeIucA/IucC family protein1e-0758.5
NC_017168:3286:5965596570351071Yersinia pestis A1122 chromosome, complete genomeaerobactin synthetase subunit alpha2e-0757.8
NC_017265:809943:8099438099438110131071Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,Aerobactin siderophore biosynthesis proteiniucA3e-0757.4
NC_017160:905783:9057839057839068531071Yersinia pestis D182038 chromosome, complete genomeaerobactin synthetase subunit alpha3e-0757.4
NC_017154:902739:9036739036739047431071Yersinia pestis D106004 chromosome, complete genomeaerobactin synthetase subunit alpha3e-0757.4
NC_014029:961522:9615229615229625921071Yersinia pestis Z176003 chromosome, complete genomeaerobactin synthetase subunit alpha3e-0757.4
NC_009381:588137:5881375881375892071071Yersinia pestis Pestoides F chromosome, complete genomesiderophore biosynthesis protein, IucA familly3e-0757.4
NC_008150:317903:3188373188373199071071Yersinia pestis Antiqua, complete genomesiderophore biosynthesis protein, IucA familly3e-0757.4