Pre_GI Gene

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Host: NC_011747 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011747:11532 Escherichia coli S88 plasmid pECOS88, complete sequence

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli S88 is a serotype O45:K1 strain isolated from a case of neonatal meningitis. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
11532133191788Aerobactin siderophore biosynthesis protein IucAQuickGO ontologyBLASTP
13392145851194putative membrane transport protein ShiFQuickGO ontologyBLASTP
1496515345381camphor resistance protein CrcBQuickGO ontologyBLASTP
1541715689273hypothetical protein
1568616120435putative enolaseQuickGO ontologyBLASTP
1658817445858SitD protein Iron transport protein inner membrane componentQuickGO ontologyBLASTP
1744218299858SitC protein iron transport protein inner membrane componentQuickGO ontologyBLASTP
1829619123828SitB protein iron transport protein ATP-binding componentQuickGO ontologyBLASTP
1912320037915SitA protein iron transport protein periplasmic-binding proteinQuickGO ontologyBLASTP
2016020351192hypothetical protein
2039320668276IS1 repressor protein InsAQuickGO ontologyBLASTP
2110121775675hypothetical proteinBLASTP
2193322127195hypothetical protein putative exported proteinQuickGO ontologyBLASTP
2220322682480hypothetical proteinBLASTP
2280023249450hypothetical proteinBLASTP
23866253681503hypothetical proteinBLASTP
2559425785192hypothetical protein
2744427668225transposase InsA ORF1 IS1QuickGO ontologyBLASTP
2758728090504transposaseQuickGO ontologyBLASTP
28381295561176plasmid-partitioning protein SopAQuickGO ontologyBLASTP
2955630527972plasmid-partitioning proteinQuickGO ontologyBLASTP
3105531216162hypothetical protein
3124431591348hypothetical proteinBLASTP
3165432235582hypothetical protein
3272133692972conserved hypothetical protein putative transposase IS110 familyQuickGO ontologyBLASTP
3384434014171hypothetical proteinBLASTP
3407334519447putative antirestriction proteinQuickGO ontologyBLASTP