Pre_GI: BLASTN Hits

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Query: NC_018080:5192264 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 5192264, End: 5221973, Length: 29710

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008463:5364428*5364428539303028603Pseudomonas aeruginosa UCBPP-PA14, complete genome042340BLASTN svgBLASTP svg
NC_009439:1075170*1075170109793122762Pseudomonas mendocina ymp, complete genome01622BLASTN svgBLASTP svg
NC_015410:1144272*1144272116462620355Pseudomonas mendocina NK-01 chromosome, complete genome01358BLASTN svgBLASTP svg
NC_015740:926920*92692094828521366Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete01185BLASTN svgBLASTP svg
NC_015556:41183044118304414271224409Pseudomonas fulva 12-X chromosome, complete genome0864BLASTN svgBLASTP svg
NC_009434:1068281*1068281109060022320Pseudomonas stutzeri A1501, complete genome0654BLASTN svgBLASTP svg
NC_008740:979830*979830100009920270Marinobacter aquaeolei VT8, complete genome3e-74287BLASTN svgBLASTP svg
NC_014532:349384*34938437223122848Halomonas elongata DSM 2581, complete genome8e-72280BLASTN svgBLASTP svg
NC_007298:2689731*2689731272716337433Dechloromonas aromatica RCB, complete genome7e-66260BLASTN svgBLASTP svg
NC_007005:830467*83046785407423608Pseudomonas syringae pv. syringae B728a, complete genome1e-61246BLASTN svgBLASTP svg
NC_005773:866157*86615792659960443Pseudomonas syringae pv. phaseolicola 1448A, complete genome4e-61244BLASTN svgBLASTP svg
NC_007508:3835000*3835000385851223513Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome6e-45190BLASTN svgBLASTP svg
NC_011901:27399842739984276222422241Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete9e-41176BLASTN svgBLASTP svg
NC_003919:3812778*3812778386982357046Xanthomonas axonopodis pv. citri str. 306, complete genome3e-40174BLASTN svgBLASTP svg
NC_010943:1332243*1332243137790845666Stenotrophomonas maltophilia K279a, complete genome1e-39172BLASTN svgBLASTP svg
NC_015947:35394723539472355883219361Burkholderia sp. JV3 chromosome, complete genome5e-36161BLASTN svgBLASTP svg
NC_007508:1446526*1446526147198625461Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome5e-33151BLASTN svgBLASTP svg
NC_007298:3271071*3271071329537724307Dechloromonas aromatica RCB, complete genome2e-32149BLASTN svgBLASTP svg
NC_007086:1224867*1224867128273457868Xanthomonas campestris pv. campestris str. 8004, complete genome3e-31145BLASTN svgBLASTP svg
NC_003902:3666544*3666544374180275259Xanthomonas campestris pv. campestris str. ATCC 33913, complete3e-31145BLASTN svgBLASTP svg
NC_014910:966761*96676199256725807Alicycliphilus denitrificans BC chromosome, complete genome1e-30143BLASTN svgBLASTP svg
NC_015422:910292*91029293677826487Alicycliphilus denitrificans K601 chromosome, complete genome1e-30143BLASTN svgBLASTP svg
NC_011071:35444503544450356909924650Stenotrophomonas maltophilia R551-3, complete genome7e-29137BLASTN svgBLASTP svg
NC_010688:1192410*1192410126259970190Xanthomonas campestris pv. campestris, complete genome7e-29137BLASTN svgBLASTP svg
NC_008700:1115436*1115436114339927964Shewanella amazonensis SB2B, complete genome7e-26127BLASTN svgBLASTP svg
NC_011901:3363500*3363500338699623497Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete3e-25125BLASTN svgBLASTP svg
NC_013851:24414072441407246552624120Allochromatium vinosum DSM 180 chromosome, complete genome1e-24123BLASTN svgBLASTP svg
NC_019940:2432689*2432689245259919911Thioflavicoccus mobilis 8321 chromosome, complete genome4e-24121BLASTN svgBLASTP svg
NC_010995:3821327*3821327385020828882Cellvibrio japonicus Ueda107, complete genome2e-23119BLASTN svgBLASTP svg
NC_007908:1328832*1328832136532136490Rhodoferax ferrireducens T118, complete genome7e-23117BLASTN svgBLASTP svg
NC_007645:6049340*6049340607799328654Hahella chejuensis KCTC 2396, complete genome1e-21113BLASTN svgBLASTP svg
NC_007973:2348481*2348481238802339543Ralstonia metallidurans CH34 chromosome 1, complete sequence4e-21111BLASTN svgBLASTP svg
NC_003919:33961363396136342036024225Xanthomonas axonopodis pv. citri str. 306, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_008340:27722327722330180624584Alkalilimnicola ehrlichei MLHE-1, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_014394:2228470*2228470225229223823Gallionella capsiferriformans ES-2 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_015424:3890293*3890293391528924997Aeromonas veronii B565 chromosome, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_013850:1198134*1198134121800019867Klebsiella variicola At-22 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007494:1*12004420044Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence2e-1385.7BLASTN svgBLASTP svg
NC_008702:2378890*2378890240382824939Azoarcus sp. BH72, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_012880:3915500*3915500393874123242Dickeya dadantii Ech703, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_011662:38616238616243991353752Thauera sp. MZ1T, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_007347:32046373204637323548530849Ralstonia eutropha JMP134 chromosome 1, complete sequence4e-1281.8BLASTN svgBLASTP svg
NC_015138:4205986*4205986423312827143Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete1e-1179.8BLASTN svgBLASTP svg
NC_016002:1975000*1975000202494749948Pseudogulbenkiania sp. NH8B, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014931:5088125*5088125512272134597Variovorax paradoxus EPS chromosome, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_013716:4885776*4885776490562719852Citrobacter rodentium ICC168, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_001263:72681*726819740324723Deinococcus radiodurans R1 chromosome 1, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_008260:497855*49785551915621302Alcanivorax borkumensis SK2, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013205:29223432922343294962327281Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,2e-1075.8BLASTN svgBLASTP svg
NC_004310:1777721*1777721180601328293Brucella suis 1330 chromosome I, complete sequence4e-0971.9BLASTN svgBLASTP svg
NC_006932:1795500*1795500182178126282Brucella abortus biovar 1 str. 9-941 chromosome I, complete4e-0971.9BLASTN svgBLASTP svg
NC_007618:1792500*1792500182000027501Brucella melitensis biovar Abortus 2308 chromosome I, complete4e-0971.9BLASTN svgBLASTP svg
NC_009074:3409849*3409849344201632168Burkholderia pseudomallei 668 chromosome I, complete sequence4e-0971.9BLASTN svgBLASTP svg
NC_010103:1777000*1777000180418827189Brucella canis ATCC 23365 chromosome I, complete sequence4e-0971.9BLASTN svgBLASTP svg
NC_010167:1287000*1287000131378426785Brucella suis ATCC 23445 chromosome II, complete sequence4e-0971.9BLASTN svgBLASTP svg
NC_010742:1794000*1794000181909925100Brucella abortus S19 chromosome 1, complete sequence4e-0971.9BLASTN svgBLASTP svg
NC_015857:1809500*1809500183566226163Brucella pinnipedialis B2/94 chromosome chromosome 1, complete4e-0971.9BLASTN svgBLASTP svg
NC_002977:2407392*2407392243909931708Methylococcus capsulatus str. Bath, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009667:1076718*1076718109886222145Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_011979:64651864651867713630619Geobacter sp. FRC-32, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013446:4281250*4281250430762526376Comamonas testosteroni CNB-2, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015422:1116359*1116359114310426746Alicycliphilus denitrificans K601 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015711:7601733*7601733762447622744Myxococcus fulvus HW-1 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008702:1094663*1094663111848823826Azoarcus sp. BH72, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_009439:31040003104000312885524856Pseudomonas mendocina ymp, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_015968:4117835*4117835416711149277Enterobacter asburiae LF7a chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_007298:17214251721425174188220458Dechloromonas aromatica RCB, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008061:19028719028724895258666Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_008322:3585601*3585601360929823698Shewanella sp. MR-7, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008391:69922269922271789818677Burkholderia cepacia AMMD chromosome 2, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_008543:22206982220698226060739910Burkholderia cenocepacia HI2424 chromosome 2, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_008782:867344*86734489009922756Acidovorax sp. JS42, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010515:21116912111691217367661986Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_010804:450130*45013047811127982Burkholderia multivorans ATCC 17616 chromosome 1, complete2e-0765.9BLASTN svgBLASTP svg
NC_015588:2200517*2200517222724526729Isoptericola variabilis 225 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003317:190975*19097521627025296Brucella melitensis 16M chromosome I, complete sequence9e-0763.9BLASTN svgBLASTP svg
NC_008595:11766581176658119686720210Mycobacterium avium 104, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_011750:12047*120474221230166Escherichia coli IAI39 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_011751:12000*120003835526356Escherichia coli UMN026 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_014100:533322*53332256190028579Caulobacter segnis ATCC 21756 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013169:21045972104597212575721161Kytococcus sedentarius DSM 20547, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011149:2701916*2701916272409922184Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-0661.9BLASTN svgBLASTP svg
NC_011080:2789744*2789744281281123068Salmonella enterica subsp. enterica serovar Newport str. SL254,3e-0661.9BLASTN svgBLASTP svg
NC_008699:11327901132790117213739348Nocardioides sp. JS614, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_003198:2703013*2703013272616623154Salmonella enterica subsp. enterica serovar Typhi str. CT18,3e-0661.9BLASTN svgBLASTP svg