Pre_GI: BLASTN Hits

Some Help

Query: NC_017515:1744500 Neisseria meningitidis M04-240196 chromosome, complete genome

Start: 1744500, End: 1840230, Length: 95731

Host Lineage: Neisseria meningitidis; Neisseria; Neisseriaceae; Neisseriales; Proteobacteria; Bacteria

General Information: The second of two pathogenic Neisseria, this organism causes septicemia and is the leading cause of life-threatening meningitis (inflammation of the meninges, the membrane surrounding the brain and spinal cord) in children. This organism typically residies in the nasopharynx cavity but can invade the respiratory epthelial barrier, cross into the bloodstream and the blood brain barrier, and cause inflammation of the meninges. Pathogenicity factors include the surface proteins (porins and opacity proteins), and the type IV pilus (which is also found in Neisseria gonorrhoeae). This organism, like Neisseria gonorrhoeae, is naturally competent, and protein complexes at the cell surface recognize the uptake signal sequence in extracellular DNA, an 8mer that is found at high frequency in Neisseria chromosomal DNA.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003112:498465*49846553573337269Neisseria meningitidis MC58, complete genome022190BLASTN svgBLASTP svg
NC_003112:18241961824196187366149466Neisseria meningitidis MC58, complete genome020740BLASTN svgBLASTP svg
NC_003116:65887965887968269623818Neisseria meningitidis Z2491, complete genome011660BLASTN svgBLASTP svg
NC_008767:45198345198348189329911Neisseria meningitidis FAM18, complete genome011090BLASTN svgBLASTP svg
NC_010120:45277145277147660723837Neisseria meningitidis 053442, complete genome010910BLASTN svgBLASTP svg
NC_014752:93300093300096491831919Neisseria lactamica ST-640, complete genome08516BLASTN svgBLASTP svg
NC_002946:68472868472870809923372Neisseria gonorrhoeae FA 1090, complete genome05309BLASTN svgBLASTP svg
NC_014752:13916151391615142388832274Neisseria lactamica ST-640, complete genome04528BLASTN svgBLASTP svg
NC_003112:84400084400086636122362Neisseria meningitidis MC58, complete genome02127BLASTN svgBLASTP svg
NC_008767:13632881363288138639123104Neisseria meningitidis FAM18, complete genome02125BLASTN svgBLASTP svg
NC_008767:2160000*2160000218237122372Neisseria meningitidis FAM18, complete genome02109BLASTN svgBLASTP svg
NC_003116:75566675566677455118886Neisseria meningitidis Z2491, complete genome02101BLASTN svgBLASTP svg
NC_003112:16853301685330171029124962Neisseria meningitidis MC58, complete genome01719BLASTN svgBLASTP svg
NC_003112:15940001594000161392219923Neisseria meningitidis MC58, complete genome01582BLASTN svgBLASTP svg
NC_008767:1888950*1888950191066621717Neisseria meningitidis FAM18, complete genome01524BLASTN svgBLASTP svg
NC_010120:144000*14400016559921600Neisseria meningitidis 053442, complete genome01495BLASTN svgBLASTP svg
NC_008767:27375927375929740423646Neisseria meningitidis FAM18, complete genome01471BLASTN svgBLASTP svg
NC_002946:10201751020175106499344819Neisseria gonorrhoeae FA 1090, complete genome0682BLASTN svgBLASTP svg
NC_003116:17340001734000175259918600Neisseria meningitidis Z2491, complete genome9e-170607BLASTN svgBLASTP svg
NC_008767:17393441739344175756118218Neisseria meningitidis FAM18, complete genome2e-167599BLASTN svgBLASTP svg
NC_002946:1935186*1935186195867523490Neisseria gonorrhoeae FA 1090, complete genome6e-106394BLASTN svgBLASTP svg
NC_014752:617987*61798763975421768Neisseria lactamica ST-640, complete genome9e-96361BLASTN svgBLASTP svg
NC_008767:1321129*1321129134743826310Neisseria meningitidis FAM18, complete genome3e-95359BLASTN svgBLASTP svg
NC_003112:14235281423528145518831661Neisseria meningitidis MC58, complete genome1e-94357BLASTN svgBLASTP svg
NC_003112:96815*9681512483128017Neisseria meningitidis MC58, complete genome5e-94355BLASTN svgBLASTP svg
NC_003112:603879*60387962713023252Neisseria meningitidis MC58, complete genome3e-71280BLASTN svgBLASTP svg
NC_010120:10658331065833109411728285Neisseria meningitidis 053442, complete genome9e-65258BLASTN svgBLASTP svg
NC_008767:136958*13695816389726940Neisseria meningitidis FAM18, complete genome1e-57234BLASTN svgBLASTP svg
NC_003116:1518110*1518110154147823369Neisseria meningitidis Z2491, complete genome2e-53220BLASTN svgBLASTP svg
NC_008767:84950*8495011280827859Neisseria meningitidis FAM18, complete genome1e-48204BLASTN svgBLASTP svg
NC_008767:87790487790490209924196Neisseria meningitidis FAM18, complete genome2e-47200BLASTN svgBLASTP svg
NC_008767:549351*54935156839719047Neisseria meningitidis FAM18, complete genome2e-47200BLASTN svgBLASTP svg
NC_010120:13135001313500133123817739Neisseria meningitidis 053442, complete genome3e-46196BLASTN svgBLASTP svg
NC_003112:673772*67377269516421393Neisseria meningitidis MC58, complete genome3e-40176BLASTN svgBLASTP svg
NC_008767:613394*61339463989326500Neisseria meningitidis FAM18, complete genome3e-40176BLASTN svgBLASTP svg
NC_010120:609323*60932363703227710Neisseria meningitidis 053442, complete genome3e-40176BLASTN svgBLASTP svg
NC_002946:13428571342857136509922243Neisseria gonorrhoeae FA 1090, complete genome4e-33153BLASTN svgBLASTP svg
NC_014752:2087998*2087998211535127354Neisseria lactamica ST-640, complete genome1e-30145BLASTN svgBLASTP svg
NC_014752:83461683461687970445089Neisseria lactamica ST-640, complete genome9e-22115BLASTN svgBLASTP svg
NC_003112:149593*14959317620526613Neisseria meningitidis MC58, complete genome3e-0973.8BLASTN svgBLASTP svg
NC_010120:2029880*2029880205559925720Neisseria meningitidis 053442, complete genome3e-0973.8BLASTN svgBLASTP svg
NC_009053:12573021257302128078923488Actinobacillus pleuropneumoniae L20, complete genome1e-0871.9BLASTN svgBLASTP svg
NC_014752:324832*32483234389919068Neisseria lactamica ST-640, complete genome7e-0765.9BLASTN svgBLASTP svg
NC_010120:662969*66296968275319785Neisseria meningitidis 053442, complete genome7e-0765.9BLASTN svgBLASTP svg
NC_003116:867943*86794389021922277Neisseria meningitidis Z2491, complete genome7e-0765.9BLASTN svgBLASTP svg