Pre_GI: BLASTN Hits

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Query: NC_017249:7993713 Bradyrhizobium japonicum USDA 6, complete genome

Start: 7993713, End: 8107099, Length: 113387

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004463:21581162158116223609977984Bradyrhizobium japonicum USDA 110, complete genome062300BLASTN svgBLASTP svg
NC_004463:22624672262467231174249276Bradyrhizobium japonicum USDA 110, complete genome047970BLASTN svgBLASTP svg
NC_004463:17490001749000176859919600Bradyrhizobium japonicum USDA 110, complete genome01633BLASTN svgBLASTP svg
NC_004463:1992000*1992000204369751698Bradyrhizobium japonicum USDA 110, complete genome01631BLASTN svgBLASTP svg
NC_004463:18725371872537189486322327Bradyrhizobium japonicum USDA 110, complete genome01622BLASTN svgBLASTP svg
NC_004463:20595002059500207783918340Bradyrhizobium japonicum USDA 110, complete genome01598BLASTN svgBLASTP svg
NC_019973:60287956028795605165122857Mesorhizobium australicum WSM2073, complete genome6e-162581BLASTN svgBLASTP svg
NC_015675:66518996651899667736225464Mesorhizobium opportunistum WSM2075 chromosome, complete genome6e-162581BLASTN svgBLASTP svg
NC_010172:798923*79892388030381381Methylobacterium extorquens PA1, complete genome1e-147533BLASTN svgBLASTP svg
NC_011004:4947980*4947980497058322604Rhodopseudomonas palustris TIE-1, complete genome6e-125458BLASTN svgBLASTP svg
NC_010338:4481356*4481356450312821773Caulobacter sp. K31, complete genome2e-115426BLASTN svgBLASTP svg
NC_007643:185135*18513520908123947Rhodospirillum rubrum ATCC 11170, complete genome4e-95359BLASTN svgBLASTP svg
NC_009140:121107*12110714459223486Salmonella enterica enterica sv Newport str. SL254, complete2e-69274BLASTN svgBLASTP svg
NC_007722:85112985112987648525357Erythrobacter litoralis HTCC2594, complete genome5e-67266BLASTN svgBLASTP svg
NC_009720:41242554124255415127427020Xanthobacter autotrophicus Py2, complete genome4e-61246BLASTN svgBLASTP svg
NC_011894:40669264066926411059943674Methylobacterium nodulans ORS 2060, complete genome3e-56230BLASTN svgBLASTP svg
NC_009720:216589*21658924097524387Xanthobacter autotrophicus Py2, complete genome2e-53220BLASTN svgBLASTP svg
NC_014923:59701825970182600283732656Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete5e-39172BLASTN svgBLASTP svg
NC_015675:65385006538500655750519006Mesorhizobium opportunistum WSM2075 chromosome, complete genome5e-39172BLASTN svgBLASTP svg
NC_019973:5899142*5899142593179432653Mesorhizobium australicum WSM2073, complete genome5e-39172BLASTN svgBLASTP svg
NC_015376:20100092010009204069430686Burkholderia gladioli BSR3 chromosome chromosome 2, complete8e-38168BLASTN svgBLASTP svg
NC_002678:3210751*3210751323209921349Mesorhizobium loti MAFF303099, complete genome1e-36165BLASTN svgBLASTP svg
NC_007925:42944724294472431768023209Rhodopseudomonas palustris BisB18, complete genome5e-33153BLASTN svgBLASTP svg
NC_000914:13553413553415858523052Rhizobium sp. NGR234 plasmid pNGR234a, complete sequence5e-33153BLASTN svgBLASTP svg
NC_004310:508483*50848353488526403Brucella suis 1330 chromosome I, complete sequence2e-32151BLASTN svgBLASTP svg
NC_010169:527500*52750055287125372Brucella suis ATCC 23445 chromosome I, complete sequence2e-32151BLASTN svgBLASTP svg
NC_015857:531314*53131455683525522Brucella pinnipedialis B2/94 chromosome chromosome 1, complete2e-32151BLASTN svgBLASTP svg
NC_006932:531000*53100055709926100Brucella abortus biovar 1 str. 9-941 chromosome I, complete5e-30143BLASTN svgBLASTP svg
NC_007618:52640052640055279626397Brucella melitensis biovar Abortus 2308 chromosome I, complete5e-30143BLASTN svgBLASTP svg
NC_010103:507482*50748253233624855Brucella canis ATCC 23365 chromosome I, complete sequence5e-30143BLASTN svgBLASTP svg
NC_010742:529500*52950055481725318Brucella abortus S19 chromosome 1, complete sequence5e-30143BLASTN svgBLASTP svg
NC_019973:59898165989816601096821153Mesorhizobium australicum WSM2073, complete genome3e-28137BLASTN svgBLASTP svg
NC_015675:66152456615245663775722513Mesorhizobium opportunistum WSM2075 chromosome, complete genome3e-28137BLASTN svgBLASTP svg
NC_014923:60608596060859607977518917Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete3e-28137BLASTN svgBLASTP svg
NC_012850:45931545931548320123887Rhizobium leguminosarum bv. trifolii WSM1325, complete genome3e-28137BLASTN svgBLASTP svg
NC_016002:3704006*3704006373059326588Pseudogulbenkiania sp. NH8B, complete genome4e-27133BLASTN svgBLASTP svg
NC_014830:3156873*3156873318066423792Intrasporangium calvum DSM 43043 chromosome, complete genome7e-26129BLASTN svgBLASTP svg
NC_020126:6344827*6344827637873333907Myxococcus stipitatus DSM 14675, complete genome3e-25127BLASTN svgBLASTP svg
NC_014623:58859035885903590954323641Stigmatella aurantiaca DW4/3-1 chromosome, complete genome7e-23119BLASTN svgBLASTP svg
NC_008752:10259801025980106353637557Acidovorax avenae subsp. citrulli AAC00-1, complete genome7e-23119BLASTN svgBLASTP svg
NC_004463:17725411772541179709924559Bradyrhizobium japonicum USDA 110, complete genome7e-23119BLASTN svgBLASTP svg
NC_008095:55277075527707555977932073Myxococcus xanthus DK 1622, complete genome4e-21113BLASTN svgBLASTP svg
NC_015711:74715007471500749740725908Myxococcus fulvus HW-1 chromosome, complete genome2e-20111BLASTN svgBLASTP svg
NC_007712:532500*53250055659924100Sodalis glossinidius str. 'morsitans', complete genome2e-20111BLASTN svgBLASTP svg
NC_003902:62482862482864848923662Xanthomonas campestris pv. campestris str. ATCC 33913, complete6e-20109BLASTN svgBLASTP svg
NC_005085:43353334335333437106535733Chromobacterium violaceum ATCC 12472, complete genome6e-20109BLASTN svgBLASTP svg
NC_007086:62689162689165055223662Xanthomonas campestris pv. campestris str. 8004, complete genome6e-20109BLASTN svgBLASTP svg
NC_010688:60501860501862846423447Xanthomonas campestris pv. campestris, complete genome6e-20109BLASTN svgBLASTP svg
NC_014221:3175013*3175013320035525343Truepera radiovictrix DSM 17093 chromosome, complete genome1e-18105BLASTN svgBLASTP svg
NC_010557:67965667965674320963554Burkholderia ambifaria MC40-6 chromosome 3, complete sequence1e-18105BLASTN svgBLASTP svg
NC_014216:2538500*2538500256387025371Desulfurivibrio alkaliphilus AHT2 chromosome, complete genome2e-17101BLASTN svgBLASTP svg
NC_011666:16019831601983162289320911Methylocella silvestris BL2, complete genome2e-17101BLASTN svgBLASTP svg
NC_011420:3822765*3822765384728424520Rhodospirillum centenum SW, complete genome2e-17101BLASTN svgBLASTP svg
NC_013510:888542*88854291609927558Thermomonospora curvata DSM 43183, complete genome6e-1799.6BLASTN svgBLASTP svg
NC_015850:2259769*2259769228620926441Acidithiobacillus caldus SM-1 chromosome, complete genome2e-1697.6BLASTN svgBLASTP svg
NC_013961:2579000*2579000261224833249Erwinia amylovora, complete genome2e-1697.6BLASTN svgBLASTP svg
NC_007644:22055992205599223465329055Moorella thermoacetica ATCC 39073, complete genome2e-1697.6BLASTN svgBLASTP svg
NC_008686:13838911383891143076746877Paracoccus denitrificans PD1222 chromosome 1, complete sequence1e-1595.6BLASTN svgBLASTP svg
NC_012214:1267589*1267589129886031272Erwinia pyrifoliae Ep1/96, complete genome4e-1593.7BLASTN svgBLASTP svg
NC_010581:29439132943913296366019748Beijerinckia indica subsp. indica ATCC 9039, complete genome4e-1593.7BLASTN svgBLASTP svg
NC_013722:1785692*1785692183919253501Xanthomonas albilineans, complete genome6e-1489.7BLASTN svgBLASTP svg
NC_007626:959684*959684100429644613Magnetospirillum magneticum AMB-1, complete genome6e-1489.7BLASTN svgBLASTP svg
NC_009937:412302*41230243181319512Azorhizobium caulinodans ORS 571, complete genome2e-1387.7BLASTN svgBLASTP svg
NC_005126:31217223121722318069058969Photorhabdus luminescens subsp. laumondii TTO1, complete genome4e-1283.8BLASTN svgBLASTP svg
NC_015856:43425004342500437154729048Collimonas fungivorans Ter331 chromosome, complete genome1e-1181.8BLASTN svgBLASTP svg
NC_013209:19253411925341195459929259Acetobacter pasteurianus IFO 3283-01, complete genome1e-1181.8BLASTN svgBLASTP svg
NC_005126:12650711265071131880053730Photorhabdus luminescens subsp. laumondii TTO1, complete genome1e-1181.8BLASTN svgBLASTP svg
NC_015656:36534403653440367842924990Frankia symbiont of Datisca glomerata chromosome, complete genome6e-1179.8BLASTN svgBLASTP svg
NC_012560:2546000*2546000257242526426Azotobacter vinelandii DJ, complete genome2e-1077.8BLASTN svgBLASTP svg
NC_013956:45500045500047503720038Pantoea ananatis LMG 20103 chromosome, complete genome2e-1077.8BLASTN svgBLASTP svg
NC_014323:50510415051041507664325603Herbaspirillum seropedicae SmR1 chromosome, complete genome2e-1077.8BLASTN svgBLASTP svg
NC_021150:2546000*2546000257243726438Azotobacter vinelandii CA6, complete genome2e-1077.8BLASTN svgBLASTP svg
NC_005126:36304593630459368847858020Photorhabdus luminescens subsp. laumondii TTO1, complete genome9e-1075.8BLASTN svgBLASTP svg
NC_005126:38120543812054388079068737Photorhabdus luminescens subsp. laumondii TTO1, complete genome9e-1075.8BLASTN svgBLASTP svg
NC_007005:44113884411388444643035043Pseudomonas syringae pv. syringae B728a, complete genome9e-1075.8BLASTN svgBLASTP svg
NC_010505:1205747*1205747122904923303Methylobacterium radiotolerans JCM 2831, complete genome9e-1075.8BLASTN svgBLASTP svg
NC_013722:2810721*2810721284465133931Xanthomonas albilineans, complete genome9e-1075.8BLASTN svgBLASTP svg
NC_014718:630188*63018865954429357Burkholderia rhizoxinica HKI 454 chromosome, complete genome9e-1075.8BLASTN svgBLASTP svg
NC_006085:481231*48123150479923569Propionibacterium acnes KPA171202, complete genome3e-0973.8BLASTN svgBLASTP svg
NC_007626:10910001091000111043819439Magnetospirillum magneticum AMB-1, complete genome3e-0973.8BLASTN svgBLASTP svg
NC_007626:3393940*3393940344229748358Magnetospirillum magneticum AMB-1, complete genome3e-0973.8BLASTN svgBLASTP svg
NC_007626:35222653522265361842896164Magnetospirillum magneticum AMB-1, complete genome3e-0973.8BLASTN svgBLASTP svg
NC_007951:20458302045830206373317904Burkholderia xenovorans LB400 chromosome 1, complete sequence3e-0973.8BLASTN svgBLASTP svg
NC_008095:4189082*4189082423409745016Myxococcus xanthus DK 1622, complete genome3e-0973.8BLASTN svgBLASTP svg
NC_014039:499233*49923352279623564Propionibacterium acnes SK137 chromosome, complete genome3e-0973.8BLASTN svgBLASTP svg
NC_015388:2143329*2143329217016326835Desulfobacca acetoxidans DSM 11109 chromosome, complete genome3e-0973.8BLASTN svgBLASTP svg
NC_015957:61193466119346619590076555Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-0871.9BLASTN svgBLASTP svg
NC_014722:1467996*1467996149010322108Burkholderia rhizoxinica HKI 454, complete genome1e-0871.9BLASTN svgBLASTP svg
NC_008391:2045348*2045348207376828421Burkholderia cepacia AMMD chromosome 2, complete sequence1e-0871.9BLASTN svgBLASTP svg
AP010958:86786986786989060722739Escherichia coli O103:H2 str. 12009 DNA, complete genome5e-0869.9BLASTN svgBLASTP svg
NC_009648:4958500*4958500498569827199Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome5e-0869.9BLASTN svgBLASTP svg
NC_012962:16616831661683171390552223Photorhabdus asymbiotica, complete genome5e-0869.9BLASTN svgBLASTP svg
NC_014394:94201594201596663724623Gallionella capsiferriformans ES-2 chromosome, complete genome5e-0869.9BLASTN svgBLASTP svg
NC_002696:3759551*3759551378932829778Caulobacter crescentus CB15, complete genome2e-0767.9BLASTN svgBLASTP svg
NC_004463:90872909087290911099923710Bradyrhizobium japonicum USDA 110, complete genome2e-0767.9BLASTN svgBLASTP svg
NC_007005:2191500*2191500223078139282Pseudomonas syringae pv. syringae B728a, complete genome2e-0767.9BLASTN svgBLASTP svg
NC_011144:10739441073944109429420351Phenylobacterium zucineum HLK1, complete genome2e-0767.9BLASTN svgBLASTP svg
NC_011144:26742422674242270317628935Phenylobacterium zucineum HLK1, complete genome2e-0767.9BLASTN svgBLASTP svg
NC_011144:2710876*2710876272938418509Phenylobacterium zucineum HLK1, complete genome2e-0767.9BLASTN svgBLASTP svg
NC_013508:34361734361737314529529Edwardsiella tarda EIB202, complete genome2e-0767.9BLASTN svgBLASTP svg
NC_013722:1816561*1816561186559949039Xanthomonas albilineans, complete genome2e-0767.9BLASTN svgBLASTP svg
NC_012808:38977513897751392263924889Methylobacterium extorquens AM1, complete genome9e-0765.9BLASTN svgBLASTP svg
NC_012808:37118063711806373409922294Methylobacterium extorquens AM1, complete genome9e-0765.9BLASTN svgBLASTP svg
NC_012808:1220378*1220378126948449107Methylobacterium extorquens AM1, complete genome9e-0765.9BLASTN svgBLASTP svg
NC_012808:1122341*1122341115920936869Methylobacterium extorquens AM1, complete genome9e-0765.9BLASTN svgBLASTP svg
NC_011770:3735162*3735162376383628675Pseudomonas aeruginosa LESB58, complete genome9e-0765.9BLASTN svgBLASTP svg
NC_008463:3503576*3503576352773524160Pseudomonas aeruginosa UCBPP-PA14, complete genome9e-0765.9BLASTN svgBLASTP svg
NC_007974:10078341007834103035922526Ralstonia metallidurans CH34 chromosome 2, complete sequence9e-0765.9BLASTN svgBLASTP svg
NC_003919:457482*45748248039122910Xanthomonas axonopodis pv. citri str. 306, complete genome9e-0765.9BLASTN svgBLASTP svg
NC_012808:39729833972983399542222440Methylobacterium extorquens AM1, complete genome9e-0765.9BLASTN svgBLASTP svg
NC_012808:4137000*4137000416801731018Methylobacterium extorquens AM1, complete genome9e-0765.9BLASTN svgBLASTP svg
NC_012808:420334*42033444610925776Methylobacterium extorquens AM1, complete genome9e-0765.9BLASTN svgBLASTP svg
NC_014659:4299552*4299552434331043759Rhodococcus equi 103S, complete genome9e-0765.9BLASTN svgBLASTP svg
NC_014500:1862000*1862000191726855269Dickeya dadantii 3937 chromosome, complete genome9e-0765.9BLASTN svgBLASTP svg
NC_012811:41077641077643723726462Methylobacterium extorquens AM1 megaplasmid, complete sequence9e-0765.9BLASTN svgBLASTP svg
NC_012811:11053951105395112959924205Methylobacterium extorquens AM1 megaplasmid, complete sequence9e-0765.9BLASTN svgBLASTP svg
NC_012808:92198592198594462922645Methylobacterium extorquens AM1, complete genome9e-0765.9BLASTN svgBLASTP svg
NC_012808:806432*80643283135724926Methylobacterium extorquens AM1, complete genome9e-0765.9BLASTN svgBLASTP svg
NC_012808:48777034877703489559917897Methylobacterium extorquens AM1, complete genome9e-0765.9BLASTN svgBLASTP svg
NC_012808:4235567*4235567425812622560Methylobacterium extorquens AM1, complete genome9e-0765.9BLASTN svgBLASTP svg
NC_010125:38171138171140405422344Gluconacetobacter diazotrophicus PAl 5, complete genome3e-0663.9BLASTN svgBLASTP svg
NC_010125:2884762*2884762294559960838Gluconacetobacter diazotrophicus PAl 5, complete genome3e-0663.9BLASTN svgBLASTP svg
NC_010125:28136532813653283723423582Gluconacetobacter diazotrophicus PAl 5, complete genome3e-0663.9BLASTN svgBLASTP svg
NC_010125:15383351538335158603047696Gluconacetobacter diazotrophicus PAl 5, complete genome3e-0663.9BLASTN svgBLASTP svg
NC_010125:14850014850017622727728Gluconacetobacter diazotrophicus PAl 5, complete genome3e-0663.9BLASTN svgBLASTP svg
NC_010125:10517351051735108259930865Gluconacetobacter diazotrophicus PAl 5, complete genome3e-0663.9BLASTN svgBLASTP svg
NC_009921:4035225*4035225407387638652Frankia sp. EAN1pec, complete genome3e-0663.9BLASTN svgBLASTP svg
NC_008278:2772726*2772726280322330498Frankia alni ACN14a, complete genome3e-0663.9BLASTN svgBLASTP svg
NC_008278:2732890*2732890278559152702Frankia alni ACN14a, complete genome3e-0663.9BLASTN svgBLASTP svg
NC_010125:955863*955863100278546923Gluconacetobacter diazotrophicus PAl 5, complete genome3e-0663.9BLASTN svgBLASTP svg
NC_010506:51950005195000521688621887Shewanella woodyi ATCC 51908, complete genome3e-0663.9BLASTN svgBLASTP svg
NC_020126:55586135558613560639247780Myxococcus stipitatus DSM 14675, complete genome3e-0663.9BLASTN svgBLASTP svg
NC_019973:56506465650646569428443639Mesorhizobium australicum WSM2073, complete genome3e-0663.9BLASTN svgBLASTP svg
NC_015675:62763576276357633952063164Mesorhizobium opportunistum WSM2075 chromosome, complete genome3e-0663.9BLASTN svgBLASTP svg
NC_015573:29009062900906293080529900Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genome3e-0663.9BLASTN svgBLASTP svg
NC_014722:1971305*1971305199935928055Burkholderia rhizoxinica HKI 454, complete genome3e-0663.9BLASTN svgBLASTP svg
NC_014623:65090006509000653534226343Stigmatella aurantiaca DW4/3-1 chromosome, complete genome3e-0663.9BLASTN svgBLASTP svg
NC_013722:850307*85030787951329207Xanthomonas albilineans, complete genome3e-0663.9BLASTN svgBLASTP svg
NC_011983:17460001746000176852422525Agrobacterium radiobacter K84 chromosome 2, complete genome3e-0663.9BLASTN svgBLASTP svg
NC_010725:4035397*4035397410959974203Methylobacterium populi BJ001, complete genome3e-0663.9BLASTN svgBLASTP svg
NC_002944:12854361285436132132435889Mycobacterium avium subsp. paratuberculosis K-10, complete genome3e-0663.9BLASTN svgBLASTP svg