Pre_GI: BLASTN Hits

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Query: NC_015957:6859259 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Start: 6859259, End: 6878954, Length: 19696

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015957:73482697348269739671748449Streptomyces violaceusniger Tu 4113 chromosome, complete genome02744BLASTN svgBLASTP svg
NC_015957:527777*52777754559917823Streptomyces violaceusniger Tu 4113 chromosome, complete genome02736BLASTN svgBLASTP svg
NC_015957:52259035225903524815322251Streptomyces violaceusniger Tu 4113 chromosome, complete genome02736BLASTN svgBLASTP svg
NC_015957:73015467301546732710225557Streptomyces violaceusniger Tu 4113 chromosome, complete genome02728BLASTN svgBLASTP svg
NC_015951:10736010736012542918070Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete02571BLASTN svgBLASTP svg
NC_015953:40455004045500406559920100Streptomyces sp. SirexAA-E chromosome, complete genome0670BLASTN svgBLASTP svg
NC_015957:74084667408466745609947634Streptomyces violaceusniger Tu 4113 chromosome, complete genome0670BLASTN svgBLASTP svg
NC_015957:72498737249873727238122509Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-180640BLASTN svgBLASTP svg
NC_003888:56225562259004333819Streptomyces coelicolor A3(2), complete genome2e-155557BLASTN svgBLASTP svg
NC_021177:14182131418213144186323651Streptomyces fulvissimus DSM 40593, complete genome3e-104387BLASTN svgBLASTP svg
NC_015953:2349503*2349503238809938597Streptomyces sp. SirexAA-E chromosome, complete genome5e-103383BLASTN svgBLASTP svg
NC_018524:17459491745949178032034372Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome1e-82315BLASTN svgBLASTP svg
NC_009142:5698100*5698100573806239963Saccharopolyspora erythraea NRRL 2338, complete genome3e-64254BLASTN svgBLASTP svg
NC_015957:49635004963500498135217853Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-56228BLASTN svgBLASTP svg
NC_018750:77050077050079437823879Streptomyces venezuelae ATCC 10712, complete genome4e-48200BLASTN svgBLASTP svg
NC_013595:89189789189791154419648Streptosporangium roseum DSM 43021, complete genome4e-45190BLASTN svgBLASTP svg
NC_010572:40986340986342959919737Streptomyces griseus subsp. griseus NBRC 13350, complete genome4e-45190BLASTN svgBLASTP svg
NC_003888:76596397659639770388744249Streptomyces coelicolor A3(2), complete genome5e-38167BLASTN svgBLASTP svg
NC_003888:7866148*7866148789016824021Streptomyces coelicolor A3(2), complete genome5e-32147BLASTN svgBLASTP svg
NC_014391:4617688*4617688463728919602Micromonospora aurantiaca ATCC 27029 chromosome, complete genome2e-22115BLASTN svgBLASTP svg
NC_019673:3041936*3041936305959917664Saccharothrix espanaensis DSM 44229 complete genome1e-20109BLASTN svgBLASTP svg
NC_009921:43990004399000442459925600Frankia sp. EAN1pec, complete genome2e-19105BLASTN svgBLASTP svg
NC_013131:621366*62136664479723432Catenulispora acidiphila DSM 44928, complete genome3e-18101BLASTN svgBLASTP svg
NC_007777:30009413000941302809927159Frankia sp. CcI3, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_015434:666692*66669270459937908Verrucosispora maris AB-18-032 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_003155:5163382*5163382518745824077Streptomyces avermitilis MA-4680, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_014391:4672105*4672105470459932495Micromonospora aurantiaca ATCC 27029 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_014391:45705674570567459134920783Micromonospora aurantiaca ATCC 27029 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_003155:29987329987331809918227Streptomyces avermitilis MA-4680, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_003155:92149492149494438122888Streptomyces avermitilis MA-4680, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_013595:52213305221330524437223043Streptosporangium roseum DSM 43021, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_018581:17180231718023176570647684Gordonia sp. KTR9 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_019673:20513632051363214091689554Saccharothrix espanaensis DSM 44229 complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014815:841484*84148489809956616Micromonospora sp. L5 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_009140:121107*12110714459223486Salmonella enterica enterica sv Newport str. SL254, complete4e-1177.8BLASTN svgBLASTP svg
NC_003903:16782516782520035432530Streptomyces coelicolor A3(2) plasmid SCP1, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_009142:27250002725000275437129372Saccharopolyspora erythraea NRRL 2338, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_015312:1*12465124651Pseudonocardia dioxanivorans CB1190 chromosome, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_019673:35591853559185357959920415Saccharothrix espanaensis DSM 44229 complete genome1e-0869.9BLASTN svgBLASTP svg
NC_018524:50667205066720509078524066Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009142:54848835484883550966924787Saccharopolyspora erythraea NRRL 2338, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015953:62123666212366625841846053Streptomyces sp. SirexAA-E chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_013595:53330005333000535220019201Streptosporangium roseum DSM 43021, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_009921:38549693854969389148136513Frankia sp. EAN1pec, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010002:57523635752363577667524313Delftia acidovorans SPH-1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014391:1812500*1812500186094748448Micromonospora aurantiaca ATCC 27029 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_013757:3651646*3651646369128339638Geodermatophilus obscurus DSM 43160, complete genome9e-0660BLASTN svgBLASTP svg
NC_013595:47580344758034478379725764Streptosporangium roseum DSM 43021, complete genome9e-0660BLASTN svgBLASTP svg
NC_008752:20565472056547207678720241Acidovorax avenae subsp. citrulli AAC00-1, complete genome9e-0660BLASTN svgBLASTP svg