Pre_GI: BLASTN Hits

Some Help

Query: NC_015957:5182460 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Start: 5182460, End: 5221284, Length: 38825

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015957:51099025109902512826818367Streptomyces violaceusniger Tu 4113 chromosome, complete genome018070BLASTN svgBLASTP svg
NC_015957:88452748845274887561630343Streptomyces violaceusniger Tu 4113 chromosome, complete genome01209BLASTN svgBLASTP svg
NC_015957:11513311513313815023018Streptomyces violaceusniger Tu 4113 chromosome, complete genome01209BLASTN svgBLASTP svg
NC_015957:74084667408466745609947634Streptomyces violaceusniger Tu 4113 chromosome, complete genome01189BLASTN svgBLASTP svg
NC_015957:73482697348269739671748449Streptomyces violaceusniger Tu 4113 chromosome, complete genome01185BLASTN svgBLASTP svg
NC_015953:111548815488Streptomyces sp. SirexAA-E chromosome, complete genome01148BLASTN svgBLASTP svg
NC_009921:4035225*4035225407387638652Frankia sp. EAN1pec, complete genome0763BLASTN svgBLASTP svg
NC_015957:73015467301546732710225557Streptomyces violaceusniger Tu 4113 chromosome, complete genome0672BLASTN svgBLASTP svg
NC_015953:62123666212366625841846053Streptomyces sp. SirexAA-E chromosome, complete genome1e-83319BLASTN svgBLASTP svg
NC_003155:36550036550038509919600Streptomyces avermitilis MA-4680, complete genome3e-72281BLASTN svgBLASTP svg
NC_013595:52822075282207531442932223Streptosporangium roseum DSM 43021, complete genome7e-36161BLASTN svgBLASTP svg
NC_013595:3541012*3541012356209921088Streptosporangium roseum DSM 43021, complete genome7e-36161BLASTN svgBLASTP svg
NC_015957:32821833282183330581123629Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-34157BLASTN svgBLASTP svg
NC_008268:74857107485710750851722808Rhodococcus sp. RHA1, complete genome2e-26129BLASTN svgBLASTP svg
NC_009921:39990403999040401805519016Frankia sp. EAN1pec, complete genome4e-25125BLASTN svgBLASTP svg
NC_015312:63989316398931641727718347Pseudonocardia dioxanivorans CB1190 chromosome, complete genome1e-18103BLASTN svgBLASTP svg
NC_013595:4031947*4031947406329831352Streptosporangium roseum DSM 43021, complete genome5e-18101BLASTN svgBLASTP svg
NC_013595:19649319649322011923627Streptosporangium roseum DSM 43021, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_003155:5163382*5163382518745824077Streptomyces avermitilis MA-4680, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_015957:19600019600021778021781Streptomyces violaceusniger Tu 4113 chromosome, complete genome8e-1797.6BLASTN svgBLASTP svg
NC_015957:51365005136500515422817729Streptomyces violaceusniger Tu 4113 chromosome, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_015957:10505870105058701052808222213Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_008095:5585346*5585346562741242067Myxococcus xanthus DK 1622, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_013131:4525075*4525075454912724053Catenulispora acidiphila DSM 44928, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_012490:43000430006847825479Rhodococcus erythropolis PR4, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_012490:26600892660089268717227084Rhodococcus erythropolis PR4, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_015957:45464034546403458592939527Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_015957:45255804525580455677331194Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_003888:86138488613848863240818561Streptomyces coelicolor A3(2), complete genome8e-1177.8BLASTN svgBLASTP svg
NC_007651:2639553*2639553269172452172Burkholderia thailandensis E264 chromosome I, complete sequence8e-1177.8BLASTN svgBLASTP svg
NC_015957:60295426029542605506325522Streptomyces violaceusniger Tu 4113 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_012803:13022611302261132380421544Micrococcus luteus NCTC 2665, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_010572:73042907304290735268448395Streptomyces griseus subsp. griseus NBRC 13350, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_012721:16359991635999166922033222Burkholderia glumae BGR1 chromosome 2, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_013855:19677819677823386637089Azospirillum sp. B510 plasmid pAB510a, complete sequence5e-0971.9BLASTN svgBLASTP svg
NC_019673:63943196394319646135767039Saccharothrix espanaensis DSM 44229 complete genome5e-0971.9BLASTN svgBLASTP svg
NC_013947:44133824413382443709923718Stackebrandtia nassauensis DSM 44728 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_013093:30684863068486311387545390Actinosynnema mirum DSM 43827, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_010612:46795944679594471951939926Mycobacterium marinum M, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_010572:75861157586115761955133437Streptomyces griseus subsp. griseus NBRC 13350, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_003888:38170003817000385464537646Streptomyces coelicolor A3(2), complete genome2e-0869.9BLASTN svgBLASTP svg
NC_009142:2822260*2822260285087528616Saccharopolyspora erythraea NRRL 2338, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_009512:44083254408325443184223518Pseudomonas putida F1, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_015957:52259035225903524815322251Streptomyces violaceusniger Tu 4113 chromosome, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_015957:61193466119346619590076555Streptomyces violaceusniger Tu 4113 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_015957:42928194292819431625023432Streptomyces violaceusniger Tu 4113 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_015711:6796082*6796082684217246091Myxococcus fulvus HW-1 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_014391:26513152651315269455543241Micromonospora aurantiaca ATCC 27029 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_010717:47877504787750482298935240Xanthomonas oryzae pv. oryzae PXO99A, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_003888:68531076853107687310519999Streptomyces coelicolor A3(2), complete genome3e-0765.9BLASTN svgBLASTP svg
NC_003155:3913789*3913789393748923701Streptomyces avermitilis MA-4680, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_008699:29167522916752293906622315Nocardioides sp. JS614, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_008699:590000*59000061720127202Nocardioides sp. JS614, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_019673:6298342*6298342632793229591Saccharothrix espanaensis DSM 44229 complete genome1e-0663.9BLASTN svgBLASTP svg
NC_013440:39770973977097405558678490Haliangium ochraceum DSM 14365, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_009142:45718894571889461144339555Saccharopolyspora erythraea NRRL 2338, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_008095:4858117*4858117490039542279Myxococcus xanthus DK 1622, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_007645:36308843630884365818427301Hahella chejuensis KCTC 2396, complete genome5e-0661.9BLASTN svgBLASTP svg