Pre_GI Gene

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Host: NC_009512 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009512:4408325 Pseudomonas putida F1, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
440832544158247500Beta-ketoacyl synthase-like proteinQuickGO ontologyBLASTP
44164784417404927glycosyl transferase family 2QuickGO ontologyBLASTP
44179084418453546dTDP-4-dehydrorhamnose 35-epimeraseQuickGO ontologyBLASTP
44184534419280828ABC-2 type transporterQuickGO ontologyBLASTP
441927044206191350ABC transporter relatedQuickGO ontologyBLASTP
442062644251554530glycosyl transferase family 2QuickGO ontologyBLASTP
442517444273032130hypothetical proteinBLASTP
442731844284271110DegTDnrJEryC1StrS aminotransferaseQuickGO ontologyBLASTP
44284304429371942glycosyl transferase family 2QuickGO ontologyBLASTP
44293614430314954WxcM domain protein C-terminal domain proteinQuickGO ontologyBLASTP
44303194430708390GtrA family proteinQuickGO ontologyBLASTP
44309224431842921glycosyl transferase family 2QuickGO ontologyBLASTP