Pre_GI: BLASTN Hits

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Query: NC_015957:4525580 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Start: 4525580, End: 4556773, Length: 31194

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015957:45464034546403458592939527Streptomyces violaceusniger Tu 4113 chromosome, complete genome020560BLASTN svgBLASTP svg
NC_014391:26513152651315269455543241Micromonospora aurantiaca ATCC 27029 chromosome, complete genome8e-69270BLASTN svgBLASTP svg
NC_009142:45718894571889461144339555Saccharopolyspora erythraea NRRL 2338, complete genome3e-68268BLASTN svgBLASTP svg
NC_015957:42928194292819431625023432Streptomyces violaceusniger Tu 4113 chromosome, complete genome3e-65258BLASTN svgBLASTP svg
NC_015957:61193466119346619590076555Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-60242BLASTN svgBLASTP svg
NC_010572:73042907304290735268448395Streptomyces griseus subsp. griseus NBRC 13350, complete genome2e-60242BLASTN svgBLASTP svg
NC_015957:60295426029542605506325522Streptomyces violaceusniger Tu 4113 chromosome, complete genome4e-55224BLASTN svgBLASTP svg
NC_013093:30684863068486311387545390Actinosynnema mirum DSM 43827, complete genome4e-46194BLASTN svgBLASTP svg
NC_009921:57874375787437580894021504Frankia sp. EAN1pec, complete genome3e-34155BLASTN svgBLASTP svg
NC_003155:11378171137817120257364757Streptomyces avermitilis MA-4680, complete genome5e-33151BLASTN svgBLASTP svg
NC_010572:75861157586115761955133437Streptomyces griseus subsp. griseus NBRC 13350, complete genome2e-32149BLASTN svgBLASTP svg
NC_015953:58657335865733590682141089Streptomyces sp. SirexAA-E chromosome, complete genome2e-26129BLASTN svgBLASTP svg
NC_008278:2772726*2772726280322330498Frankia alni ACN14a, complete genome2e-26129BLASTN svgBLASTP svg
NC_000962:18708421870842189534224501Mycobacterium tuberculosis H37Rv, complete genome1e-21113BLASTN svgBLASTP svg
NC_002755:18596301859630187892619297Mycobacterium tuberculosis CDC1551, complete genome1e-21113BLASTN svgBLASTP svg
NC_002945:18562281856228188073824511Mycobacterium bovis AF2122/97, complete genome1e-21113BLASTN svgBLASTP svg
NC_008769:18761091876109190061624508Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome1e-21113BLASTN svgBLASTP svg
NC_009525:18723601872360189686024501Mycobacterium tuberculosis H37Ra, complete genome1e-21113BLASTN svgBLASTP svg
NC_009565:18662141866214189074224529Mycobacterium tuberculosis F11, complete genome1e-21113BLASTN svgBLASTP svg
NC_012207:18480911848091186924521155Mycobacterium bovis BCG str. Tokyo 172, complete genome1e-21113BLASTN svgBLASTP svg
NC_015848:18966601896660192209125432Mycobacterium canettii CIPT 140010059, complete genome1e-21113BLASTN svgBLASTP svg
NC_019950:18708631870863189629425432Mycobacterium canettii CIPT 140060008 complete genome1e-21113BLASTN svgBLASTP svg
NC_010612:103081*10308113565632576Mycobacterium marinum M, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_002945:32462783246278326609919822Mycobacterium bovis AF2122/97, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_008769:32424533242453326356021108Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_012207:32374403237440325728519846Mycobacterium bovis BCG str. Tokyo 172, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_013440:39770973977097405558678490Haliangium ochraceum DSM 14365, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_015848:33437313343731336691823188Mycobacterium canettii CIPT 140010059, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_019950:33064193306419333122724809Mycobacterium canettii CIPT 140060008 complete genome1e-1593.7BLASTN svgBLASTP svg
NC_009565:2306574*2306574233169725124Mycobacterium tuberculosis F11, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_013947:44133824413382443709923718Stackebrandtia nassauensis DSM 44728 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_013855:19677819677823386637089Azospirillum sp. B510 plasmid pAB510a, complete sequence3e-1385.7BLASTN svgBLASTP svg
NC_008095:5585346*5585346562741242067Myxococcus xanthus DK 1622, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_008611:2615204*2615204263604620843Mycobacterium ulcerans Agy99, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_015957:51824605182460522128438825Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_010612:3745332*3745332378131835987Mycobacterium marinum M, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_000962:32884643288464331029721834Mycobacterium tuberculosis H37Rv, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_002755:32827853282785330371920935Mycobacterium tuberculosis CDC1551, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009525:33004563300456332228921834Mycobacterium tuberculosis H37Ra, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009565:32999373299937332177021834Mycobacterium tuberculosis F11, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010612:90890*9089011475023861Mycobacterium marinum M, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013440:10441001044100107126227163Haliangium ochraceum DSM 14365, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_020133:2886541*2886541291380027260Mycobacterium liflandii 128FXT, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010612:83564883564886299927352Mycobacterium marinum M, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_010612:46795944679594471951939926Mycobacterium marinum M, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_002677:17160001716000173800622007Mycobacterium leprae TN, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_004578:52691945269194529610426911Pseudomonas syringae pv. tomato str. DC3000, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_011896:17160001716000173793921940Mycobacterium leprae Br4923, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_014623:47887684788768481298824221Stigmatella aurantiaca DW4/3-1 chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_020133:77341773419927021930Mycobacterium liflandii 128FXT, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015848:48350048350050998826489Mycobacterium canettii CIPT 140010059, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011896:17319717319719198818792Mycobacterium leprae Br4923, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_002677:17317017317019196118792Mycobacterium leprae TN, complete genome9e-0763.9BLASTN svgBLASTP svg