Pre_GI: BLASTN Hits

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Query: NC_015379:6023926 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,

Start: 6023926, End: 6047280, Length: 23355

Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.




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Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004129:62409046240904627459933696Pseudomonas fluorescens Pf-5, complete genome01328BLASTN svgBLASTP svg
NC_004129:4993974*4993974502072326750Pseudomonas fluorescens Pf-5, complete genome0856BLASTN svgBLASTP svg
NC_020209:997385*997385104138844004Pseudomonas poae RE*1-1-14, complete genome0803BLASTN svgBLASTP svg
NC_010501:73436373436376909934737Pseudomonas putida W619, complete genome4e-175622BLASTN svgBLASTP svg
NC_020064:521500*52150055828736788Serratia marcescens FGI94, complete genome9e-102379BLASTN svgBLASTP svg
NC_008825:25649652564965258966024696Methylibium petroleiphilum PM1, complete genome5e-88333BLASTN svgBLASTP svg
NC_009512:755658*75565878272327066Pseudomonas putida F1, complete genome2e-81311BLASTN svgBLASTP svg
NC_004129:44342594434259445862724369Pseudomonas fluorescens Pf-5, complete genome1e-76295BLASTN svgBLASTP svg
NC_007651:3719191*3719191374181722627Burkholderia thailandensis E264 chromosome I, complete sequence4e-73283BLASTN svgBLASTP svg
NC_015379:1151143*1151143118279531653Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,5e-60240BLASTN svgBLASTP svg
NC_012660:33203303320330335044730118Pseudomonas fluorescens SBW25 chromosome, complete genome3e-40174BLASTN svgBLASTP svg
NC_009937:4090404*4090404411705426651Azorhizobium caulinodans ORS 571, complete genome4e-36161BLASTN svgBLASTP svg
NC_007963:2555012*2555012257573920728Chromohalobacter salexigens DSM 3043, complete genome2e-32149BLASTN svgBLASTP svg
NC_015379:42492384249238427562626389Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,1e-29139BLASTN svgBLASTP svg
NC_015379:89441*8944111781628376Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-19105BLASTN svgBLASTP svg
NC_012660:21433762143376220316659791Pseudomonas fluorescens SBW25 chromosome, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_007492:39543453954345399809943755Pseudomonas fluorescens PfO-1, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_015379:67145456714545674216027616Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,1e-1489.7BLASTN svgBLASTP svg
NC_007492:17355951735595175753521941Pseudomonas fluorescens PfO-1, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_015379:3736500*3736500376722330724Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,3e-1281.8BLASTN svgBLASTP svg
NC_007492:36555453655545368613730593Pseudomonas fluorescens PfO-1, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015379:90890490890497110662203Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,5e-1177.8BLASTN svgBLASTP svg
NC_015379:1600715*1600715162682426110Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,5e-1177.8BLASTN svgBLASTP svg
NC_014323:3292082*3292082331943527354Herbaspirillum seropedicae SmR1 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_007963:11908471190847124782656980Chromohalobacter salexigens DSM 3043, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_007492:27710212771021280204831028Pseudomonas fluorescens PfO-1, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_004129:24407442440744246509824355Pseudomonas fluorescens Pf-5, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_012779:25861752586175261323427060Edwardsiella ictaluri 93-146, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015556:18998501899850192183821989Pseudomonas fulva 12-X chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015556:819503*81950384290123399Pseudomonas fulva 12-X chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012660:1737423*1737423176616428742Pseudomonas fluorescens SBW25 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012660:46695004669500468960120102Pseudomonas fluorescens SBW25 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012660:3689223*3689223371658727365Pseudomonas fluorescens SBW25 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007492:26293502629350265266523316Pseudomonas fluorescens PfO-1, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007951:570500*57050060471734218Burkholderia xenovorans LB400 chromosome 1, complete sequence7e-0763.9BLASTN svgBLASTP svg
NC_005773:5310339*5310339533285822520Pseudomonas syringae pv. phaseolicola 1448A, complete genome7e-0763.9BLASTN svgBLASTP svg