Pre_GI Gene

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Host: NC_007492 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007492:2629350 Pseudomonas fluorescens PfO-1, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
26293502629988639Two Component Transcriptional Regulator LuxR familyQuickGO ontologyBLASTP
263014126321081968Beta-lactamase-likeQuickGO ontologyBLASTP
26322142633137924Transcriptional Regulator LysR familyQuickGO ontologyBLASTP
263320626344411236hypothetical proteinBLASTP
26347402634991252hypothetical protein
26350612635222162hypothetical protein
263545026366101161Sarcosine oxidaseQuickGO ontologyBLASTP
26366972637530834hypothetical proteinBLASTP
26376442638051408hypothetical protein
26380672638591525hypothetical protein
26387192639459741hypothetical proteinBLASTP
263945626406851230hypothetical proteinBLASTP
26409572641319363hypothetical proteinBLASTP
264189226431061215hypothetical proteinBLASTP
264343626448421407GABA permeaseQuickGO ontologyBLASTP
26449022645528627hypothetical proteinBLASTP
264560526471161512Putative diguanylate cyclase GGDEF domainQuickGO ontologyBLASTP
26472752647781507methionine sulfoxide reductase AQuickGO ontologyBLASTP
264788726494881602Putative diguanylate cyclase GGDEF domainQuickGO ontologyBLASTP
26497092650341633Isochorismatase hydrolaseQuickGO ontologyBLASTP
26504302651419990Zinc-containing alcohol dehydrogenase superfamilyQuickGO ontologyBLASTP
265152926526651137inner-membrane translocatorQuickGO ontologyBLASTP