Pre_GI: BLASTN Hits

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Query: NC_013714:2477638 Bifidobacterium dentium Bd1, complete genome

Start: 2477638, End: 2502768, Length: 25131

Host Lineage: Bifidobacterium dentium; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Common oral and gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium dentium species represents over forty strains which were isolated from human dental caries and human feces.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_018720:17630617630623239356088Bifidobacterium asteroides PRL2011 chromosome, complete genome01709BLASTN svgBLASTP svg
NC_015514:47793547793550079522861Cellulomonas fimi ATCC 484 chromosome, complete genome5e-128466BLASTN svgBLASTP svg
NC_014151:44973244973248203832307Cellulomonas flavigena DSM 20109 chromosome, complete genome8e-124452BLASTN svgBLASTP svg
NC_012669:41182304118230414262824399Beutenbergia cavernae DSM 12333, complete genome1e-116428BLASTN svgBLASTP svg
NC_015671:32119723211972325530043329Cellvibrio gilvus ATCC 13127 chromosome, complete genome7e-109402BLASTN svgBLASTP svg
NC_013715:18862151886215190668320469Rothia mucilaginosa DY-18, complete genome2e-96361BLASTN svgBLASTP svg
NC_003888:40312994031299405409922801Streptomyces coelicolor A3(2), complete genome4e-95357BLASTN svgBLASTP svg
NC_006087:24392522439252246595526704Leifsonia xyli subsp. xyli str. CTCB07, complete genome8e-90339BLASTN svgBLASTP svg
NC_018750:37415813741581376849826918Streptomyces venezuelae ATCC 10712, complete genome5e-88333BLASTN svgBLASTP svg
NC_014550:2835696*2835696285851122816Arthrobacter arilaitensis Re117, complete genome1e-76295BLASTN svgBLASTP svg
NC_014215:1929000*1929000194714618147Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,2e-63252BLASTN svgBLASTP svg
NC_013510:262888*26288828309920212Thermomonospora curvata DSM 43183, complete genome6e-63250BLASTN svgBLASTP svg
NC_015953:34565353456535350619749663Streptomyces sp. SirexAA-E chromosome, complete genome4e-58234BLASTN svgBLASTP svg
NC_015673:106038*10603812809922062Corynebacterium resistens DSM 45100 chromosome, complete genome2e-28135BLASTN svgBLASTP svg
NC_007760:1806136*1806136183371527580Anaeromyxobacter dehalogenans 2CP-C, complete genome9e-25123BLASTN svgBLASTP svg
NC_008278:2813362*2813362285431440953Frankia alni ACN14a, complete genome9e-25123BLASTN svgBLASTP svg
NC_011145:2543321*2543321257209928779Anaeromyxobacter sp. K, complete genome9e-25123BLASTN svgBLASTP svg
NC_011891:2607812*2607812263605028239Anaeromyxobacter dehalogenans 2CP-1, complete genome2e-22115BLASTN svgBLASTP svg
NC_008048:38964538964542759937955Sphingopyxis alaskensis RB2256, complete genome4e-21111BLASTN svgBLASTP svg
NC_007777:25434752543475256518621712Frankia sp. CcI3, complete genome1e-20109BLASTN svgBLASTP svg
NC_015711:3085038*3085038311227427237Myxococcus fulvus HW-1 chromosome, complete genome2e-19105BLASTN svgBLASTP svg
NC_013131:7401253*7401253742304021788Catenulispora acidiphila DSM 44928, complete genome2e-19105BLASTN svgBLASTP svg
NC_003919:1716831*1716831175716240332Xanthomonas axonopodis pv. citri str. 306, complete genome3e-18101BLASTN svgBLASTP svg
NC_008095:3719441*3719441374439224952Myxococcus xanthus DK 1622, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_008095:8198970*8198970822901030041Myxococcus xanthus DK 1622, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_015578:39804963980496402949649001Treponema primitia ZAS-2 chromosome, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_015161:2018493*2018493204698428492Deinococcus proteolyticus MRP chromosome, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_014168:471000*47100049425123252Segniliparus rotundus DSM 44985 chromosome, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_008268:71806637180663722188141219Rhodococcus sp. RHA1, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_008054:1117703*1117703113633218630Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete3e-0971.9BLASTN svgBLASTP svg
NC_008529:11336651133665115246418800Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete3e-0971.9BLASTN svgBLASTP svg
NC_018681:76925607692560771641223853Nocardia brasiliensis ATCC 700358 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015312:3675148*3675148374606470917Pseudonocardia dioxanivorans CB1190 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_002936:1395432*1395432141906223631Dehalococcoides ethenogenes 195, complete genome1e-0869.9BLASTN svgBLASTP svg
AP010958:12660*126603398921330Escherichia coli O103:H2 str. 12009 DNA, complete genome5e-0867.9BLASTN svgBLASTP svg
CP002185:11921*119213722925309Escherichia coli W, complete genome5e-0867.9BLASTN svgBLASTP svg
CP002516:4081484*4081484410409522612Escherichia coli KO11, complete genome5e-0867.9BLASTN svgBLASTP svg
CU928145:11394*113943596224569Escherichia coli 55989 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
CU928160:11381*113813595024570Escherichia coli IAI1 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_002655:12000*120003357021571Escherichia coli O157:H7 EDL933, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_002695:12000*120003517323174Escherichia coli O157:H7 str. Sakai, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_009800:12162*121623729725136Escherichia coli HS, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_009801:11921*119213399422074Escherichia coli E24377A, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010468:3970995*3970995399406323069Escherichia coli ATCC 8739, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_011748:11394*113943596224569Escherichia coli 55989, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_011750:12047*120474221230166Escherichia coli IAI39 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_011751:12000*120003835526356Escherichia coli UMN026 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007802:179780*17978020828528506Jannaschia sp. CCS1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009832:16642381664238169623231995Serratia proteamaculans 568, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014363:19736701973670199216618497Olsenella uli DSM 7084 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014727:1292213*1292213132033528123Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,2e-0765.9BLASTN svgBLASTP svg
NC_003143:483395*48339550335019956Yersinia pestis CO92, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_004088:41166764116676413528618611Yersinia pestis KIM, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_005810:42245004224500424264818149Yersinia pestis biovar Microtus str. 91001, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_006155:713174*71317473201318840Yersinia pseudotuberculosis IP 32953, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008149:402599*40259942390621308Yersinia pestis Nepal516, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008150:4561633*4561633458159919967Yersinia pestis Antiqua, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010159:80966380966383240722745Yersinia pestis Angola, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010162:10208521102085211023231523795Sorangium cellulosum 'So ce 56', complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010465:39587663958766397730818543Yersinia pseudotuberculosis YPIII, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014500:177824*17782420069822875Dickeya dadantii 3937 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_020126:39797923979792400548025689Myxococcus stipitatus DSM 14675, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_013960:25923892592389261181519427Nitrosococcus halophilus Nc4 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg