Query: NC_013315:3613288 Clostridium difficile CD196 chromosome, complete genome
Start: 3613288, End: 3633599, Length: 20312
Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria
General Information: Isolated from a single patient with pseudomembranous colitis in a Paris hospital in 1985. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_009089:3782000 | 3782000 | 3804099 | 22100 | Clostridium difficile 630, complete genome | 0 | 5305 | BLASTN svg | BLASTP svg |
| NC_014614:2333890* | 2333890 | 2356338 | 22449 | Clostridium sticklandii, complete genome | 2e-74 | 287 | BLASTN svg | BLASTP svg |
| NC_012563:2761570* | 2761570 | 2802302 | 40733 | Clostridium botulinum A2 str. Kyoto, complete genome | 1e-48 | 202 | BLASTN svg | BLASTP svg |
| NC_010516:2567911* | 2567911 | 2587808 | 19898 | Clostridium botulinum B1 str. Okra, complete genome | 1e-48 | 202 | BLASTN svg | BLASTP svg |
| NC_010516:2594159 | 2594159 | 2615963 | 21805 | Clostridium botulinum B1 str. Okra, complete genome | 2e-34 | 155 | BLASTN svg | BLASTP svg |
| NC_010520:2668702 | 2668702 | 2690461 | 21760 | Clostridium botulinum A3 str. Loch Maree, complete genome | 3e-27 | 131 | BLASTN svg | BLASTP svg |
| NC_008593:1797000* | 1797000 | 1822013 | 25014 | Clostridium novyi NT, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_004557:558500* | 558500 | 582741 | 24242 | Clostridium tetani E88, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_010516:3466000 | 3466000 | 3488099 | 22100 | Clostridium botulinum B1 str. Okra, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_021182:380500* | 380500 | 400927 | 20428 | Clostridium pasteurianum BC1, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_007503:1111457 | 1111457 | 1168840 | 57384 | Carboxydothermus hydrogenoformans Z-2901, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_014964:557910 | 557910 | 577765 | 19856 | Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, complete | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_020210:2044944 | 2044944 | 2074683 | 29740 | Geobacillus sp. GHH01, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_012563:3580000* | 3580000 | 3602532 | 22533 | Clostridium botulinum A2 str. Kyoto, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_014328:2643588 | 2643588 | 2667210 | 23623 | Clostridium ljungdahlii ATCC 49587 chromosome, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_011565:665515* | 665515 | 688830 | 23316 | Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2, | 9e-06 | 60 | BLASTN svg | BLASTP svg |