Pre_GI: BLASTN Hits

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Query: NC_010168:1373337 Renibacterium salmoninarum ATCC 33209 chromosome, complete genome

Start: 1373337, End: 1397862, Length: 24526

Host Lineage: Renibacterium salmoninarum; Renibacterium; Micrococcaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This bacterial pathogen is the causal agent of bacterial kidney disease (BKD) of salmonid fish. This disease is a significant threat to the healthy and sustainable production of salmon for consumption and species conservation efforts in the USA. The development of treatments are further complicated as the organism is vertically transmitted from infected females to their eggs, is difficult to culture in vitro, and is a facultative intracellular pathogen. The completion of the genome sequence of Renibacterium salmoninarum will be a benefit to the scientific community at many levels and will be of immediate use to researchers and fish health practitioners dealing with BKD in farmed fish as well as captive broodstocks of endangered species-listed populations. For example, genome data will serve as a foundation for identification of virulence factors, DNA vaccine gene candidates, and improved diagnostic tests.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015145:26937492693749273661842870Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome3e-37165BLASTN svgBLASTP svg
NC_015052:21815142181514221381832305Bifidobacterium longum subsp. infantis 157F, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_009077:2308634*2308634235649847865Mycobacterium sp. JLS, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_000962:31168183116818313633319516Mycobacterium tuberculosis H37Rv, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_000962:37815013781501380757326073Mycobacterium tuberculosis H37Rv, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_002755:31109293110929312975718829Mycobacterium tuberculosis CDC1551, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_002755:47287247287249645723586Mycobacterium tuberculosis CDC1551, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_002945:30733703073370309459921230Mycobacterium bovis AF2122/97, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008578:591357*59135762659935243Acidothermus cellulolyticus 11B, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008769:30702663070266308959919334Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_009525:2635792*2635792265864122850Mycobacterium tuberculosis H37Ra, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_009525:31287863128786314904720262Mycobacterium tuberculosis H37Ra, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_009525:37940003794000381625122252Mycobacterium tuberculosis H37Ra, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_009565:31280943128094314823720144Mycobacterium tuberculosis F11, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_009565:34857723485772350477419003Mycobacterium tuberculosis F11, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_012207:30630393063039308477921741Mycobacterium bovis BCG str. Tokyo 172, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_013093:125363*12536314809922737Actinosynnema mirum DSM 43827, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_013530:28195692819569285198132413Xylanimonas cellulosilytica DSM 15894, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_012815:1757992*1757992178040722416Bifidobacterium animalis subsp. lactis DSM 10140, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012814:1757753*1757753178063522883Bifidobacterium animalis subsp. lactis Bl-04, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008618:20001720001722396823952Bifidobacterium adolescentis ATCC 15703, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013235:3812838*3812838384142328586Nakamurella multipartita DSM 44233, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013235:13544431354443137485420412Nakamurella multipartita DSM 44233, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011206:1379068*1379068140505225985Acidithiobacillus ferrooxidans ATCC 53993, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014550:23555002355500237821322714Arthrobacter arilaitensis Re117, complete genome3e-0661.9BLASTN svgBLASTP svg