Query: NC_010168:1373337 Renibacterium salmoninarum ATCC 33209 chromosome, complete genome
Start: 1373337, End: 1397862, Length: 24526
Host Lineage: Renibacterium salmoninarum; Renibacterium; Micrococcaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This bacterial pathogen is the causal agent of bacterial kidney disease (BKD) of salmonid fish. This disease is a significant threat to the healthy and sustainable production of salmon for consumption and species conservation efforts in the USA. The development of treatments are further complicated as the organism is vertically transmitted from infected females to their eggs, is difficult to culture in vitro, and is a facultative intracellular pathogen. The completion of the genome sequence of Renibacterium salmoninarum will be a benefit to the scientific community at many levels and will be of immediate use to researchers and fish health practitioners dealing with BKD in farmed fish as well as captive broodstocks of endangered species-listed populations. For example, genome data will serve as a foundation for identification of virulence factors, DNA vaccine gene candidates, and improved diagnostic tests.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_015145:2693749 | 2693749 | 2736618 | 42870 | Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome | 3e-37 | 165 | BLASTN svg | BLASTP svg |
NC_015052:2181514 | 2181514 | 2213818 | 32305 | Bifidobacterium longum subsp. infantis 157F, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_009077:2308634* | 2308634 | 2356498 | 47865 | Mycobacterium sp. JLS, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_000962:3116818 | 3116818 | 3136333 | 19516 | Mycobacterium tuberculosis H37Rv, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_000962:3781501 | 3781501 | 3807573 | 26073 | Mycobacterium tuberculosis H37Rv, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_002755:3110929 | 3110929 | 3129757 | 18829 | Mycobacterium tuberculosis CDC1551, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_002755:472872 | 472872 | 496457 | 23586 | Mycobacterium tuberculosis CDC1551, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_002945:3073370 | 3073370 | 3094599 | 21230 | Mycobacterium bovis AF2122/97, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_008578:591357* | 591357 | 626599 | 35243 | Acidothermus cellulolyticus 11B, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_008769:3070266 | 3070266 | 3089599 | 19334 | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_009525:2635792* | 2635792 | 2658641 | 22850 | Mycobacterium tuberculosis H37Ra, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_009525:3128786 | 3128786 | 3149047 | 20262 | Mycobacterium tuberculosis H37Ra, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_009525:3794000 | 3794000 | 3816251 | 22252 | Mycobacterium tuberculosis H37Ra, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_009565:3128094 | 3128094 | 3148237 | 20144 | Mycobacterium tuberculosis F11, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_009565:3485772 | 3485772 | 3504774 | 19003 | Mycobacterium tuberculosis F11, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_012207:3063039 | 3063039 | 3084779 | 21741 | Mycobacterium bovis BCG str. Tokyo 172, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_013093:125363* | 125363 | 148099 | 22737 | Actinosynnema mirum DSM 43827, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_013530:2819569 | 2819569 | 2851981 | 32413 | Xylanimonas cellulosilytica DSM 15894, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_012815:1757992* | 1757992 | 1780407 | 22416 | Bifidobacterium animalis subsp. lactis DSM 10140, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_012814:1757753* | 1757753 | 1780635 | 22883 | Bifidobacterium animalis subsp. lactis Bl-04, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_008618:200017 | 200017 | 223968 | 23952 | Bifidobacterium adolescentis ATCC 15703, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_013235:3812838* | 3812838 | 3841423 | 28586 | Nakamurella multipartita DSM 44233, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_013235:1354443 | 1354443 | 1374854 | 20412 | Nakamurella multipartita DSM 44233, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_011206:1379068* | 1379068 | 1405052 | 25985 | Acidithiobacillus ferrooxidans ATCC 53993, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_014550:2355500 | 2355500 | 2378213 | 22714 | Arthrobacter arilaitensis Re117, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |