Pre_GI: BLASTN Hits

Some Help

Query: NC_010067:1507823 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 1507823, End: 1536184, Length: 28362

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003198:1621347*1621347164626724921Salmonella enterica subsp. enterica serovar Typhi str. CT18,018550BLASTN svgBLASTP svg
NC_006511:1506915*1506915154594239028Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC018450BLASTN svgBLASTP svg
NC_011080:14707941470794150838537592Salmonella enterica subsp. enterica serovar Newport str. SL254,018370BLASTN svgBLASTP svg
NC_010102:16165301616530165555739028Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,018360BLASTN svgBLASTP svg
NC_003197:1471349*1471349150894537597Salmonella typhimurium LT2, complete genome018360BLASTN svgBLASTP svg
NC_011149:17106011710601173914728547Salmonella enterica subsp. enterica serovar Agona str. SL483,018300BLASTN svgBLASTP svg
NC_006905:15090931509093153636427272Salmonella enterica subsp. enterica serovar Choleraesuis str015180BLASTN svgBLASTP svg
NC_011083:14768941476894150250725614Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,013750BLASTN svgBLASTP svg
NC_004631:13258171325817135139825582Salmonella enterica subsp. enterica serovar Typhi Ty2, complete013700BLASTN svgBLASTP svg
NC_013282:20260832026083208019854116Cronobacter turicensis, complete genome2e-171611BLASTN svgBLASTP svg
NC_020063:20772332077233210134824116Enterobacteriaceae bacterium strain FGI 57, complete genome1e-101379BLASTN svgBLASTP svg
NC_009778:19562251956225198255126327Enterobacter sakazakii ATCC BAA-894, complete genome3e-65258BLASTN svgBLASTP svg
NC_020260:19933441993344201786024517Cronobacter sakazakii Sp291, complete genome1e-64256BLASTN svgBLASTP svg
NC_021150:2026496*2026496204664620151Azotobacter vinelandii CA6, complete genome3e-25125BLASTN svgBLASTP svg
NC_015410:3209954*3209954323120121248Pseudomonas mendocina NK-01 chromosome, complete genome3e-25125BLASTN svgBLASTP svg
NC_012560:2026483*2026483204663320151Azotobacter vinelandii DJ, complete genome3e-25125BLASTN svgBLASTP svg
NC_012691:17430381743038178035537318Tolumonas auensis DSM 9187, complete genome2e-23119BLASTN svgBLASTP svg
NC_008702:1153344*1153344117844425101Azoarcus sp. BH72, complete genome7e-23117BLASTN svgBLASTP svg
NC_009434:2577717*2577717259643418718Pseudomonas stutzeri A1501, complete genome7e-23117BLASTN svgBLASTP svg
NC_015379:4691868*4691868471845126584Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,7e-23117BLASTN svgBLASTP svg
NC_003112:744476*74447676938624911Neisseria meningitidis MC58, complete genome2e-20109BLASTN svgBLASTP svg
NC_007484:1229899*1229899125251522617Nitrosococcus oceani ATCC 19707, complete genome2e-20109BLASTN svgBLASTP svg
NC_007614:26158826158828609924512Nitrosospira multiformis ATCC 25196 chromosome 1, complete2e-20109BLASTN svgBLASTP svg
NC_008781:26550712655071268316628096Polaromonas naphthalenivorans CJ2, complete genome2e-20109BLASTN svgBLASTP svg
NC_013446:2237854*2237854227259934746Comamonas testosteroni CNB-2, complete genome2e-20109BLASTN svgBLASTP svg
NC_013446:32090003209000323064521646Comamonas testosteroni CNB-2, complete genome2e-20109BLASTN svgBLASTP svg
NC_013889:1202385*1202385122409321709Thioalkalivibrio sp. K90mix chromosome, complete genome2e-20109BLASTN svgBLASTP svg
NC_014118:2316000*2316000234104325044Burkholderia sp. CCGE1002 chromosome chromosome 2, complete2e-20109BLASTN svgBLASTP svg
NC_015563:43830004383000440526222263Delftia sp. Cs1-4 chromosome, complete genome2e-20109BLASTN svgBLASTP svg
NC_016002:1326500*1326500135490028401Pseudogulbenkiania sp. NH8B, complete genome2e-20109BLASTN svgBLASTP svg
NC_018691:3525430*3525430358162756198Alcanivorax dieselolei B5 chromosome, complete genome2e-20109BLASTN svgBLASTP svg
NC_007146:14054591405459143009924641Haemophilus influenzae 86-028NP, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_010939:896500*89650092159925100Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete2e-1799.6BLASTN svgBLASTP svg
NC_015581:771482*77148280463933158Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_015856:17335001733500176113127632Collimonas fungivorans Ter331 chromosome, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_008577:24021652402165244759945435Shewanella sp. ANA-3 chromosome 1, complete sequence4e-1591.7BLASTN svgBLASTP svg
NC_015497:2997275*2997275302162024346Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_007298:2856104*2856104289461138508Dechloromonas aromatica RCB, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_010676:2869936*2869936289564625711Burkholderia phytofirmans PsJN chromosome 2, complete sequence6e-1177.8BLASTN svgBLASTP svg
NC_010676:897801*89780191973821938Burkholderia phytofirmans PsJN chromosome 2, complete sequence6e-1177.8BLASTN svgBLASTP svg
NC_015379:46303674630367466559935233Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-1075.8BLASTN svgBLASTP svg
NC_009663:2500186*2500186252039120206Sulfurovum sp. NBC37-1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007952:1293024*1293024131920626183Burkholderia xenovorans LB400 chromosome 2, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_002695:45841774584177463575951583Escherichia coli O157:H7 str. Sakai, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_002655:46531604653160470328250123Escherichia coli O157:H7 EDL933, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007947:2140000*2140000218514745148Methylobacillus flagellatus KT, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014935:31020*310205039419375Nitratifractor saLSUginis DSM 16511 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
AP010958:36695003669500372827458775Escherichia coli O103:H2 str. 12009 DNA, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014722:1084616*1084616111430129686Burkholderia rhizoxinica HKI 454, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012962:11890211189021120825819238Photorhabdus asymbiotica, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012559:2752825*2752825277274819924Laribacter hongkongensis HLHK9, complete genome3e-0661.9BLASTN svgBLASTP svg