Pre_GI: BLASTN Hits

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Query: NC_009654:2958316 Marinomonas sp. MWYL1, complete genome

Start: 2958316, End: 2988385, Length: 30070

Host Lineage: Marinomonas; Marinomonas; Oceanospirillaceae; Oceanospirillales; Proteobacteria; Bacteria

General Information: Marinomonas MWYL1 was isolated from the root surface of the salt marsh grass Spartina anglica, growing near the North Norfolk, England village of Stiffkey. The genus Marinomonas comprises a widespread group of g -proteobacteria that exist in coastal waters, and which had been earlier been included in the genus Alteromonas. The interest in Marinomonas MWYL 1 was that it could grow on the betaine molecule Dimethylsulphoniopropionate (DMSP) as sole carbon source and, when it did do, it released large amounts of the gas dimethyl sulphide. DMSP is a compatible solute that is used by many marine phytoplankton and seaweed macroalgae as an osmoticum and an anti-stress compound. In addition, a few known land angiosperms make DMSP and these include certain species of Spartina - hence the choice of these plants as a source for DMSP-degrading bacteria. Indeed, others had shown previously that the DMSP-catabolising bacteria isolated from Spartina root surfaces included Marinomonas strains.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009654:29402782940278295966519388Marinomonas sp. MWYL1, complete genome02676BLASTN svgBLASTP svg
NC_015276:2804874*2804874282337618503Marinomonas mediterranea MMB-1 chromosome, complete genome1e-89339BLASTN svgBLASTP svg
NC_012560:1260031*1260031129243132401Azotobacter vinelandii DJ, complete genome3e-62248BLASTN svgBLASTP svg
NC_013960:48961648961651178322168Nitrosococcus halophilus Nc4 chromosome, complete genome3e-37165BLASTN svgBLASTP svg
NC_007645:6013242*6013242603721023969Hahella chejuensis KCTC 2396, complete genome3e-34155BLASTN svgBLASTP svg
NC_008228:81600081600083918923190Pseudoalteromonas atlantica T6c, complete genome7e-29137BLASTN svgBLASTP svg
NC_015276:27690002769000279436025361Marinomonas mediterranea MMB-1 chromosome, complete genome3e-28135BLASTN svgBLASTP svg
NC_015061:42860004286000431231226313Rahnella sp. Y9602 chromosome, complete genome2e-20109BLASTN svgBLASTP svg
NC_005810:43067164306716433058723872Yersinia pestis biovar Microtus str. 91001, complete genome4e-18101BLASTN svgBLASTP svg
NC_004741:3240909*3240909326236621458Shigella flexneri 2a str. 2457T, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_004337:32497913249791327283723047Shigella flexneri 2a str. 301, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_002695:3994970*3994970401809923130Escherichia coli O157:H7 str. Sakai, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_000913:3256307*3256307327821621910Escherichia coli K12, complete genome2e-1385.7BLASTN svgBLASTP svg
CU928160:3344746*3344746336309918354Escherichia coli IAI1 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
CU928145:3608917*3608917363276823852Escherichia coli 55989 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
CP002516:613462*61346263169018229Escherichia coli KO11, complete genome2e-1385.7BLASTN svgBLASTP svg
CP002185:3475991*3475991350005224062Escherichia coli W, complete genome2e-1385.7BLASTN svgBLASTP svg
AC_000091:3258377*3258377328148023104Escherichia coli W3110 DNA, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007613:29818292981829300438522557Shigella boydii Sb227, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_008258:32247213224721324719422474Shigella flexneri 5 str. 8401, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_011751:37107863710786373513424349Escherichia coli UMN026 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_011750:3768692*3768692379303824347Escherichia coli IAI39 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_011748:3608917*3608917363276823852Escherichia coli 55989, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010658:3014371*3014371303259918229Shigella boydii CDC 3083-94, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010498:34885133488513350850119989Escherichia coli SMS-3-5, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010473:3354052*3354052337759923548Escherichia coli str. K-12 substr. DH10B, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010468:61381261381263388120070Escherichia coli ATCC 8739, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_009801:35950013595001361359918599Escherichia coli E24377A, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_009800:3307123*3307123332547318351Escherichia coli HS, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010995:3640913*3640913366036019448Cellvibrio japonicus Ueda107, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_018419:86250086250088609923600Secondary endosymbiont of Ctenarytaina eucalypti chromosome,9e-1073.8BLASTN svgBLASTP svg
NC_018697:361339*36133938386822530Cycloclasticus sp. P1 chromosome, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_009901:46279984627998465009922102Shewanella pealeana ATCC 700345, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_013416:875758*87575890109925342Aggregatibacter actinomycetemcomitans D11S-1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008536:5192235*5192235521520622972Solibacter usitatus Ellin6076, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004061:237205*23720526067723473Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013861:32156403215640323817522536Legionella longbeachae NSW150, complete genome4e-0661.9BLASTN svgBLASTP svg