Pre_GI: BLASTN Hits

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Query: NC_008800:1497746 Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,

Start: 1497746, End: 1520099, Length: 22354

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This isolate (strain 8081; NCTC 13174) is a mouse-lethal serotype of Yersinia enterocolitica that contains a high pathogenicity island (HPI) that encodes an iron uptake system (yersiniabactin) and a type II secretion system. Causes gastroenteritis. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015224:31910003191000321042819429Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,016410BLASTN svgBLASTP svg
NC_010465:17240001724000174609922100Yersinia pseudotuberculosis YPIII, complete genome010560BLASTN svgBLASTP svg
NC_008149:24111612411161243409922939Yersinia pestis Nepal516, complete genome010520BLASTN svgBLASTP svg
NC_005810:26134562613456263609922644Yersinia pestis biovar Microtus str. 91001, complete genome010520BLASTN svgBLASTP svg
NC_004088:18018191801819182425322435Yersinia pestis KIM, complete genome010520BLASTN svgBLASTP svg
NC_003143:28493772849377287209922723Yersinia pestis CO92, complete genome010520BLASTN svgBLASTP svg
NC_010159:18614651861465188409922635Yersinia pestis Angola, complete genome010500BLASTN svgBLASTP svg
NC_010634:29600002960000298209922100Yersinia pseudotuberculosis PB1/+, complete genome010480BLASTN svgBLASTP svg
NC_006155:30407693040769306409923331Yersinia pseudotuberculosis IP 32953, complete genome010470BLASTN svgBLASTP svg
NC_015224:3892972*3892972393636443393Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02583BLASTN svgBLASTP svg
NC_015224:88953688953690956920034Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02567BLASTN svgBLASTP svg
NC_015224:14402831440283145849618214Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02559BLASTN svgBLASTP svg
NC_015224:4386599*4386599441050923911Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02557BLASTN svgBLASTP svg
NC_015224:17638481763848179825034403Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02551BLASTN svgBLASTP svg
NC_015224:35875003587500361767930180Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02547BLASTN svgBLASTP svg
NC_015224:3225000*3225000325159926600Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02545BLASTN svgBLASTP svg
NC_015224:10673901067390110671739328Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02541BLASTN svgBLASTP svg
NC_015224:2061951*2061951208443822488Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02535BLASTN svgBLASTP svg
NC_015224:32917363291736331359921864Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02494BLASTN svgBLASTP svg
NC_015224:17031301703130172897125842Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02494BLASTN svgBLASTP svg
NC_014228:28120002812000283429522296Xenorhabdus nematophila ATCC 19061, complete genome0955BLASTN svgBLASTP svg
NC_010473:24658442465844248995824115Escherichia coli str. K-12 substr. DH10B, complete genome0868BLASTN svgBLASTP svg
NC_000913:23739842373984239819324210Escherichia coli K12, complete genome0868BLASTN svgBLASTP svg
AC_000091:23796702379670240484125172Escherichia coli W3110 DNA, complete genome0868BLASTN svgBLASTP svg
NC_010554:18710001871000189502424025Proteus mirabilis HI4320, complete genome0708BLASTN svgBLASTP svg
NC_012214:14384761438476146005421579Erwinia pyrifoliae Ep1/96, complete genome2e-161577BLASTN svgBLASTP svg
NC_013961:24411482441148246091119764Erwinia amylovora, complete genome7e-155555BLASTN svgBLASTP svg
NC_010694:13242501324250134559221343Erwinia tasmaniensis, complete genome2e-148533BLASTN svgBLASTP svg
NC_015224:4473230*4473230449714523916Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,2e-84321BLASTN svgBLASTP svg
NC_004347:1038253*1038253107053732285Shewanella oneidensis MR-1, complete genome9e-68266BLASTN svgBLASTP svg
NC_018419:86250086250088609923600Secondary endosymbiont of Ctenarytaina eucalypti chromosome,2e-56228BLASTN svgBLASTP svg
NC_006905:4638707*4638707467273934033Salmonella enterica subsp. enterica serovar Choleraesuis str6e-41176BLASTN svgBLASTP svg
NC_011080:47032664703266472876525500Salmonella enterica subsp. enterica serovar Newport str. SL254,1e-39172BLASTN svgBLASTP svg
CP002185:4750571*4750571477251221942Escherichia coli W, complete genome2e-34155BLASTN svgBLASTP svg
NC_008563:49051864905186492360518420Escherichia coli APEC O1, complete genome1e-32149BLASTN svgBLASTP svg
NC_002528:148274*14827417635828085Buchnera aphidicola str. APS (Acyrthosiphon pisum), complete9e-28133BLASTN svgBLASTP svg
NC_009085:89360189360191657222972Acinetobacter baumannii ATCC 17978, complete genome2e-25125BLASTN svgBLASTP svg
NC_010611:79735179735182014222792Acinetobacter baumannii ACICU, complete genome5e-23117BLASTN svgBLASTP svg
NC_014259:33690003369000338959720598Acinetobacter sp. DR1 chromosome, complete genome1e-20109BLASTN svgBLASTP svg
NC_005966:71559171559173850722917Acinetobacter sp. ADP1, complete genome1e-20109BLASTN svgBLASTP svg
NC_004061:146862*14686216626919408Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome2e-1695.6BLASTN svgBLASTP svg
NC_007204:69697269697272009923128Psychrobacter arcticus 273-4, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_012691:24140424140426512723724Tolumonas auensis DSM 9187, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_004578:38173303817330384200124672Pseudomonas syringae pv. tomato str. DC3000, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_005061:52470452470454944624743Candidatus Blochmannia floridanus, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_012912:24270924270927148728779Dickeya zeae Ech1591, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010814:3332088*3332088335178319696Geobacter lovleyi SZ, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014500:20191132019113204779528683Dickeya dadantii 3937 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014973:50995435099543513368034138Geobacter sp. M18 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015662:110950*11095013012219173Buchnera aphidicola (Cinara tujafilina) chromosome, complete4e-0867.9BLASTN svgBLASTP svg
NC_014972:23282282328228236343935212Desulfobulbus propionicus DSM 2032 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004061:16637516637518719720823Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014815:658893*65889368838329491Micromonospora sp. L5 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_004545:141478*14147816560324126Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome3e-0661.9BLASTN svgBLASTP svg