Pre_GI Gene

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Host: NC_015662 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015662:110950 Buchnera aphidicola (Cinara tujafilina) chromosome, complete

Host Lineage: Buchnera aphidicola; Buchnera; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: It is believed that the Buchnera provide the essential nutrients the host lacks. Besides a nutritional co-dependence, due to a co-existence of millions of years, Buchnera have lost the ability to produce cell surface components such as lipopolysaccharides. This makes for an obligate endosymbiont relationship between host and Buchnera. Buchnera are prokaryotic cells which belong to the gamma-Proteobacteria, closely related to the Enterobacteriaceae family. Phylogenetic studies using 16S rRNA indicate that the symbiotic relationship was established around 200-250 million years ago. Since Buchnera are closely related to Escherichia coli and Haemophilus influenzae, comparative genomic studies can shed light on the evolutionary mechanisms of intracellular endosymbiosis as well as the different underlying molecular basis between organisms with parasitic behavior and symbionts.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1109501138112862isoleucyl-tRNA synthetaseQuickGO ontologyBLASTP
11422511450928530S ribosomal protein S20QuickGO ontologyBLASTP
1146101157521143chaperone Hsp40QuickGO ontologyBLASTP
1157741177772004chaperone Hsp70QuickGO ontologyBLASTP
118158118535378NADH dehydrogenase I subunit AQuickGO ontologyBLASTP
118861119277417NADH dehydrogenase I subunit BQuickGO ontologyBLASTP
1194441212041761NADH dehydrogenase I subunit C subunit DQuickGO ontologyBLASTP
121309121716408NADH dehydrogenase I subunit EQuickGO ontologyBLASTP
1217191230351317NADH dehydrogenase I subunit FQuickGO ontologyBLASTP
1232111259102700NADH dehydrogenase I subunit GQuickGO ontologyBLASTP
125910126890981NADH dehydrogenase I subunit HQuickGO ontologyBLASTP
126903127448546NADH dehydrogenase I subunit IQuickGO ontologyBLASTP
127463127990528NADH dehydrogenase I subunit JQuickGO ontologyBLASTP
127991128296306NADH dehydrogenase I subunit KQuickGO ontologyBLASTP
1282931301221830NADH dehydrogenase I subunit LQuickGO ontologyBLASTP