Pre_GI: BLASTN Hits

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Query: NC_008148:3024867 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 3024867, End: 3046715, Length: 21849

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008148:24980002498000255085152852Rubrobacter xylanophilus DSM 9941, complete genome4e-156559BLASTN svgBLASTP svg
NC_014831:21330602133060217362540566Thermaerobacter marianensis DSM 12885 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_014217:80040680040682559925194Starkeya novella DSM 506 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_003888:55505825550582557168721106Streptomyces coelicolor A3(2), complete genome7e-1693.7BLASTN svgBLASTP svg
NC_014831:329983*32998335731327331Thermaerobacter marianensis DSM 12885 chromosome, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_007908:10101621010162103411423953Rhodoferax ferrireducens T118, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_003155:3913789*3913789393748923701Streptomyces avermitilis MA-4680, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_010998:11105211105213523024179Rhizobium etli CIAT 652 plasmid pA, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_009512:10253651025365104401118647Pseudomonas putida F1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014318:7821227*7821227785959938373Amycolatopsis mediterranei U32 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015138:11430151143015116543022416Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete3e-0971.9BLASTN svgBLASTP svg
NC_021177:4124839*4124839415343928601Streptomyces fulvissimus DSM 40593, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014964:1695000*1695000172192326924Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, complete1e-0869.9BLASTN svgBLASTP svg
NC_013159:3554389*3554389357362219234Saccharomonospora viridis DSM 43017, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008278:30258993025899304559919701Frankia alni ACN14a, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008769:1125567*1125567114763722071Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_002945:1095337*1095337111759922263Mycobacterium bovis AF2122/97, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_002755:1095105*1095105111578720683Mycobacterium tuberculosis CDC1551, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_000962:1095078*1095078111574920672Mycobacterium tuberculosis H37Rv, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009525:1096386*1096386111845622071Mycobacterium tuberculosis H37Ra, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009565:1098847*1098847112029321447Mycobacterium tuberculosis F11, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012207:1097228*1097228111789920672Mycobacterium bovis BCG str. Tokyo 172, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012724:359444*35944438978130338Burkholderia glumae BGR1 chromosome 1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012779:16297311629731165390624176Edwardsiella ictaluri 93-146, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015848:1105892*1105892112732621435Mycobacterium canettii CIPT 140010059, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010505:1581429*1581429160710125673Methylobacterium radiotolerans JCM 2831, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010510:38888538888540909920215Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete3e-0661.9BLASTN svgBLASTP svg
NC_013093:73773773773776222824492Actinosynnema mirum DSM 43827, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015389:17540617540619807822673Coriobacterium glomerans PW2 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015711:31220003122000314984427845Myxococcus fulvus HW-1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_020064:15014411501441151984318403Serratia marcescens FGI94, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_019940:32674363267436329462227187Thioflavicoccus mobilis 8321 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_003305:1297785*1297785132171123927Agrobacterium tumefaciens str. C58 chromosome linear, complete3e-0661.9BLASTN svgBLASTP svg