Pre_GI: BLASTN Hits

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Query: NC_003103:563961 Rickettsia conorii str. Malish 7, complete genome

Start: 563961, End: 582063, Length: 18103

Host Lineage: Rickettsia conorii; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This strain was isolated from a human in South Africa. Causative agent for Rocky Mountain spotted fever. This genus, like other Rickettsial organisms such as Neorickettsia and Anaplasma, is composed of obligate intracellular pathogens. The latter is composed of two organisms, Rickettsia prowazekii and Rickettsia typhi. The bacteria are transmitted via an insect, usually a tick, to a host organism, in this case humans, where they target endothelial cells and sometimes macrophages. They attach via an adhesin, rickettsial outer membrane protein A, and are internalized where they persist as cytoplasmically free organisms. Transovarial transmission (from mother to offspring) occurs in the invertebrate host. This organism causes Rocky Mountain spotted fever which can cause severe damage to the endothelial layer of major organs, including the lungs, heart, kidneys, and skeletal muscle which can result in death.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010263:563814*56381458651822705Rickettsia rickettsii str. Iowa, complete genome016140BLASTN svgBLASTP svg
NC_009882:563830*56383058653522706Rickettsia rickettsii str. 'Sheila Smith', complete genome016140BLASTN svgBLASTP svg
NC_009881:562000*56200058446322464Rickettsia akari str. Hartford, complete genome04357BLASTN svgBLASTP svg
NC_009879:670169*67016968976419596Rickettsia canadensis str. McKiel, complete genome03533BLASTN svgBLASTP svg
NC_000963:506500*50650052532718828Rickettsia prowazekii str. Madrid E, complete genome02864BLASTN svgBLASTP svg
NC_009883:11975001197500121859921100Rickettsia bellii OSU 85-389, complete genome0910BLASTN svgBLASTP svg
NC_007109:13350371335037135749822462Rickettsia felis URRWXCal2, complete genome3e-27131BLASTN svgBLASTP svg
NC_003103:11338061133806115644922644Rickettsia conorii str. Malish 7, complete genome3e-27131BLASTN svgBLASTP svg
NC_007110:112626026260Rickettsia felis URRWXCal2 plasmid pRF, complete sequence2e-22115BLASTN svgBLASTP svg
NC_009882:11237091123709114614722439Rickettsia rickettsii str. 'Sheila Smith', complete genome2e-22115BLASTN svgBLASTP svg
NC_010263:11359321135932115460218671Rickettsia rickettsii str. Iowa, complete genome2e-22115BLASTN svgBLASTP svg
NC_016050:1149000*1149000117209923100Rickettsia japonica YH, complete genome2e-22115BLASTN svgBLASTP svg
NC_010263:100000*10000012209922100Rickettsia rickettsii str. Iowa, complete genome1e-20109BLASTN svgBLASTP svg
NC_009882:100000*10000012209922100Rickettsia rickettsii str. 'Sheila Smith', complete genome1e-20109BLASTN svgBLASTP svg
NC_007109:11052511105251112857523325Rickettsia felis URRWXCal2, complete genome1e-20109BLASTN svgBLASTP svg
NC_012633:1145500*1145500116442718928Rickettsia africae ESF-5, complete genome4e-20107BLASTN svgBLASTP svg
NC_015866:1144958*1144958116861223655Rickettsia heilongjiangensis 054 chromosome, complete genome4e-20107BLASTN svgBLASTP svg
NC_009900:12200821220082123809918018Rickettsia massiliae MTU5, complete genome2e-18101BLASTN svgBLASTP svg
NC_012633:98000*9800012009922100Rickettsia africae ESF-5, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_009879:10354461035446106011424669Rickettsia canadensis str. McKiel, complete genome6e-1693.7BLASTN svgBLASTP svg
NC_012633:12000*120003409922100Rickettsia africae ESF-5, complete genome2e-1591.7BLASTN svgBLASTP svg
NC_003103:12114*121143207519962Rickettsia conorii str. Malish 7, complete genome2e-1591.7BLASTN svgBLASTP svg
NC_012730:131445*13144515343621992Rickettsia peacockii str. Rustic, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_009879:107890*10789012574317854Rickettsia canadensis str. McKiel, complete genome1e-1385.7BLASTN svgBLASTP svg
NC_009881:92929*9292911990326975Rickettsia akari str. Hartford, complete genome1e-1385.7BLASTN svgBLASTP svg
NC_015866:14071*140713274218672Rickettsia heilongjiangensis 054 chromosome, complete genome1e-1385.7BLASTN svgBLASTP svg
NC_016050:15224152243358318360Rickettsia japonica YH, complete genome1e-1385.7BLASTN svgBLASTP svg
NC_010263:13826*138263609922274Rickettsia rickettsii str. Iowa, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_009882:13826*138263610122276Rickettsia rickettsii str. 'Sheila Smith', complete genome6e-1383.8BLASTN svgBLASTP svg
NC_012730:652092*65209267059918508Rickettsia peacockii str. Rustic, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_009883:277409*27740930010322695Rickettsia bellii OSU 85-389, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_009900:180970*18097020133120362Rickettsia massiliae MTU5, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_016050:771752*77175279719725446Rickettsia japonica YH, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_009883:34306734306736795424888Rickettsia bellii OSU 85-389, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_009879:141000*14100016835327354Rickettsia canadensis str. McKiel, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_007109:80833180833182664718317Rickettsia felis URRWXCal2, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_009881:166500*16650019436227863Rickettsia akari str. Hartford, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_010263:771901*77190179080218902Rickettsia rickettsii str. Iowa, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_012730:411526*41152643309921574Rickettsia peacockii str. Rustic, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_015866:23344823344825473021283Rickettsia heilongjiangensis 054 chromosome, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_015866:767790*76779079562627837Rickettsia heilongjiangensis 054 chromosome, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_016050:23600023600025587419875Rickettsia japonica YH, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_009900:23198323198325409922117Rickettsia massiliae MTU5, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_012846:2154000*2154000217726123262Bartonella grahamii as4aup, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_016050:182218*18221820254820331Rickettsia japonica YH, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_008530:469802*46980249214622345Lactobacillus gasseri ATCC 33323, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_003103:266013*26601328459918587Rickettsia conorii str. Malish 7, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_007940:266000*26600028816822169Rickettsia bellii RML369-C, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_007940:669143*66914368959920457Rickettsia bellii RML369-C, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_009881:10994791099479112870429226Rickettsia akari str. Hartford, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_009881:23650023650025585219353Rickettsia akari str. Hartford, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_009882:23240023240025009917700Rickettsia rickettsii str. 'Sheila Smith', complete genome2e-0661.9BLASTN svgBLASTP svg
NC_009883:1262000*1262000128409922100Rickettsia bellii OSU 85-389, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_016050:1088223*1088223111009921877Rickettsia japonica YH, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015866:274550*27455029923324684Rickettsia heilongjiangensis 054 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012730:33250033250035137618877Rickettsia peacockii str. Rustic, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012730:293634*29363431769424061Rickettsia peacockii str. Rustic, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_010263:23248223248225109918618Rickettsia rickettsii str. Iowa, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_016050:73993*739939772123729Rickettsia japonica YH, complete genome8e-0660BLASTN svgBLASTP svg
NC_009883:1492425*1492425152313430710Rickettsia bellii OSU 85-389, complete genome8e-0660BLASTN svgBLASTP svg
NC_007940:1485006*1485006151623031225Rickettsia bellii RML369-C, complete genome8e-0660BLASTN svgBLASTP svg
NC_003103:22595622595624833922384Rickettsia conorii str. Malish 7, complete genome8e-0660BLASTN svgBLASTP svg