Pre_GI: BLASTN Hits

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Query: NC_002516:776787 Pseudomonas aeruginosa PAO1, complete genome

Start: 776787, End: 802239, Length: 25453

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008463:43421194342119436920327085Pseudomonas aeruginosa UCBPP-PA14, complete genome02456BLASTN svgBLASTP svg
NC_011770:45421834542183456916026978Pseudomonas aeruginosa LESB58, complete genome01935BLASTN svgBLASTP svg
NC_009439:2337024*2337024236235425331Pseudomonas mendocina ymp, complete genome1e-61246BLASTN svgBLASTP svg
NC_015410:3502099*3502099352815926061Pseudomonas mendocina NK-01 chromosome, complete genome4e-61244BLASTN svgBLASTP svg
NC_015410:1202370*1202370122824825879Pseudomonas mendocina NK-01 chromosome, complete genome2e-59238BLASTN svgBLASTP svg
NC_015410:1324313*1324313135087526563Pseudomonas mendocina NK-01 chromosome, complete genome8e-47196BLASTN svgBLASTP svg
NC_015410:2838132*2838132286405125920Pseudomonas mendocina NK-01 chromosome, complete genome3e-46194BLASTN svgBLASTP svg
NC_008463:31688373168837319814929313Pseudomonas aeruginosa UCBPP-PA14, complete genome3e-31145BLASTN svgBLASTP svg
NC_015379:1600715*1600715162682426110Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,3e-31145BLASTN svgBLASTP svg
NC_008686:953269532612062225297Paracoccus denitrificans PD1222 chromosome 1, complete sequence9e-25123BLASTN svgBLASTP svg
NC_010002:45084674508467453496626500Delftia acidovorans SPH-1, complete genome1e-20109BLASTN svgBLASTP svg
NC_008751:1431905*1431905145566423760Desulfovibrio vulgaris subsp. vulgaris DP4, complete genome2e-19105BLASTN svgBLASTP svg
NC_007510:943068*94306896450321436Burkholderia sp. 383 chromosome 1, complete sequence3e-18101BLASTN svgBLASTP svg
NC_008060:47686147686150729730437Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence3e-18101BLASTN svgBLASTP svg
NC_008542:1021848*1021848105088429037Burkholderia cenocepacia HI2424 chromosome 1, complete sequence3e-18101BLASTN svgBLASTP svg
NC_009074:2970435*2970435301145841024Burkholderia pseudomallei 668 chromosome I, complete sequence3e-18101BLASTN svgBLASTP svg
NC_010508:981377*981377100519623820Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence3e-18101BLASTN svgBLASTP svg
NC_010804:831000*83100085316922170Burkholderia multivorans ATCC 17616 chromosome 1, complete3e-18101BLASTN svgBLASTP svg
NC_012724:82983082983085458124752Burkholderia glumae BGR1 chromosome 1, complete genome3e-18101BLASTN svgBLASTP svg
NC_002937:2068117*2068117214464576529Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete5e-1797.6BLASTN svgBLASTP svg
NC_014532:22680782268078229613528058Halomonas elongata DSM 2581, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_008782:2062962*2062962208700324042Acidovorax sp. JS42, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011740:28599332859933288499725065Escherichia fergusonii ATCC 35469, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012214:2805297*2805297283239127095Erwinia pyrifoliae Ep1/96, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012912:3853377*3853377389607042694Dickeya zeae Ech1591, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013729:49784014978401500265524255Kribbella flavida DSM 17836, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_002655:3769643*3769643381434344701Escherichia coli O157:H7 EDL933, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_000913:2975659*2975659300672831070Escherichia coli K12, complete genome8e-1073.8BLASTN svgBLASTP svg
CU928160:3030324*3030324306823137908Escherichia coli IAI1 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
CU928145:3196173*3196173323284736675Escherichia coli 55989 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
CP002516:903241*90324194330840068Escherichia coli KO11, complete genome8e-1073.8BLASTN svgBLASTP svg
CP002185:3167738*3167738320702439287Escherichia coli W, complete genome8e-1073.8BLASTN svgBLASTP svg
AC_000091:29762932976293300863132339Escherichia coli W3110 DNA, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_002695:3702344*3702344374703744694Escherichia coli O157:H7 str. Sakai, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_008044:1401814*1401814142133819525Silicibacter sp. TM1040, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_009801:31757143175714321109935386Escherichia coli E24377A, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_013592:713036*71303676182148786Dickeya dadantii Ech586, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_012779:3176820*3176820323178054961Edwardsiella ictaluri 93-146, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_011751:3285646*3285646333126645621Escherichia coli UMN026 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_011750:3407500*3407500343726129762Escherichia coli IAI39 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_011748:3196173*3196173323284736675Escherichia coli 55989, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_010473:3069529*3069529310059831070Escherichia coli str. K-12 substr. DH10B, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_010468:906957*90695794803541079Escherichia coli ATCC 8739, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_003198:3042000*3042000306436622367Salmonella enterica subsp. enterica serovar Typhi str. CT18,3e-0971.9BLASTN svgBLASTP svg
NC_004631:3030580*3030580304986119282Salmonella enterica subsp. enterica serovar Typhi Ty2, complete3e-0971.9BLASTN svgBLASTP svg
NC_011004:4183993*4183993422629442302Rhodopseudomonas palustris TIE-1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_011083:3171171*3171171319192520755Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,3e-0971.9BLASTN svgBLASTP svg
NC_012880:38273903827390385759930210Dickeya dadantii Ech703, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013716:5201097*5201097527659975503Citrobacter rodentium ICC168, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014121:4299500*4299500433477235273Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete3e-0971.9BLASTN svgBLASTP svg
NC_014306:10354510354513169228148Erwinia billingiae Eb661, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_020181:4800298*4800298483905538758Enterobacter aerogenes EA1509E, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_020260:440000*44000046819628197Cronobacter sakazakii Sp291, complete genome3e-0971.9BLASTN svgBLASTP svg
AP010958:3474077*3474077351339539319Escherichia coli O103:H2 str. 12009 DNA, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007794:3218729*3218729324230423576Novosphingobium aromaticivorans DSM 12444, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014117:2608000*2608000263073122732Burkholderia sp. CCGE1002 chromosome chromosome 1, complete5e-0867.9BLASTN svgBLASTP svg
NC_006513:1379735*1379735146218482450Azoarcus sp. EbN1, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_004193:375416*375416683449308034Oceanobacillus iheyensis HTE831, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005773:4539751*4539751456760327853Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009937:958576*95857698323924664Azorhizobium caulinodans ORS 571, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010804:1334581*1334581135591721337Burkholderia multivorans ATCC 17616 chromosome 1, complete2e-0765.9BLASTN svgBLASTP svg
NC_015259:1803266*1803266182644223177Polymorphum gilvum SL003B-26A1 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006526:12020001202000121991217913Zymomonas mobilis subsp. mobilis ZM4, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_009348:1663870*1663870168298019111Aeromonas salmonicida subsp. salmonicida A449, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_010645:3720501*3720501374549924999Bordetella avium 197N, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_013520:718732*71873273509916368Veillonella parvula DSM 2008, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_013592:80428880428883459430307Dickeya dadantii Ech586, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014500:89413689413693546441329Dickeya dadantii 3937 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_019897:26965872696587272049823912Thermobacillus composti KWC4 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010688:1192410*1192410126259970190Xanthomonas campestris pv. campestris, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010644:1540249*1540249155929819050Elusimicrobium minutum Pei191, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007508:38650003865000390220337204Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007086:1224867*1224867128273457868Xanthomonas campestris pv. campestris str. 8004, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_003902:3666544*3666544374180275259Xanthomonas campestris pv. campestris str. ATCC 33913, complete3e-0661.9BLASTN svgBLASTP svg