Pre_GI: BLASTP Hits

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Query: NC_020134:2237421:2237421 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 2237421, End: 2238056, Length: 636

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009012:686740:705303705303705941639Clostridium thermocellum ATCC 27405, complete genomethiamine pyrophosphokinase1e-50199
NC_018664:1729794:175009217500921750724633Clostridium acidurici 9a chromosome, complete genomethiamine pyrophosphokinase ThiN2e-42172
NC_013173:3854368:386019938601993860837639Desulfomicrobium baculatum DSM 4028, complete genomethiamine pyrophosphokinase3e-37154
NC_016584:4905310:491598149159814916631651Desulfosporosinus orientis DSM 765 chromosome, complete genomethiamine pyrophosphokinase4e-26117
NC_007530:3616828:367495436749543675595642Bacillus anthracis str. 'Ames Ancestor', complete genomehypothetical protein1e-25116
NC_005945:3636321:367552236755223676163642Bacillus anthracis str. Sterne, complete genomehypothetical protein1e-25116
NC_011773:3689473:370971937097193710360642Bacillus cereus AH820 chromosome, complete genomethiamine pyrophosphokinase1e-25116
NC_012581:559182:563091563091563732642Bacillus anthracis str. CDC 684 chromosome, complete genomethiamine pyrophosphokinase1e-25116
NC_010184:3713359:373373937337393734380642Bacillus weihenstephanensis KBAB4, complete genomethiamine pyrophosphokinase1e-25116
NC_005957:3665657:369650236965023697143642Bacillus thuringiensis serovar konkukian str. 97-27, completethiamine pyrophosphokinase3e-25115
NC_011658:3603009:366287736628773663518642Bacillus cereus AH187 chromosome, complete genomethiamine pyrophosphokinase2e-25115
NC_016771:3599170:361537536153753616016642Bacillus cereus NC7401, complete genomehypothetical protein2e-25115
NC_017200:3701043:371923337192333719874642Bacillus thuringiensis serovar finitimus YBT-020 chromosome,thiamine pyrophosphokinase3e-25114
NC_011725:3862094:387955138795513880192642Bacillus cereus B4264 chromosome, complete genomethiamine pyrophosphokinase3e-25114
NC_014246:676570:676570676570677364795Mobiluncus curtisii ATCC 43063 chromosome, complete genomeputative thiamine diphosphokinase1e-24112
NC_018515:3909646:392140439214043922060657Desulfosporosinus meridiei DSM 13257 chromosome, complete genomethiamine pyrophosphokinase2e-24112
NC_016048:2907702:293371929337192934357639Oscillibacter valericigenes Sjm18-20, complete genomeputative thiamine pyrophosphokinase2e-23108
NC_014103:4059905:407651640765164077163648Bacillus megaterium DSM319 chromosome, complete genomethiamine pyrophosphokinase1e-22106
NC_012121:837586:841319841319841960642Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative thiamine pyrophosphokinase5e-1994.4
NC_009718:1024000:103782710378271038438612Fervidobacterium nodosum Rt17-B1, complete genomethiamine pyrophosphokinase1e-1893.2
NC_014169:1442435:144620614462061446931726Bifidobacterium longum subsp. longum JDM301 chromosome, completethiamine pyrophosphokinase2e-1892.8
NC_007929:653814:661910661910662572663Lactobacillus salivarius subsp. salivarius UCC118, complete genomeThiamin pyrophosphokinase3e-1891.7
NC_017095:1333810:134600813460081346628621Fervidobacterium pennivorans DSM 9078 chromosome, complete genomethiamine diphosphokinase4e-1788.2
NC_013895:1282566:129928112992811299940660Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completethiamine diphosphokinase1e-1582.8
NC_016605:1033000:105039610503961051052657Pediococcus claussenii ATCC BAA-344 chromosome, complete genomethiamine pyrophosphokinase5e-1581.3
NC_009667:1203861:120386112038611204517657Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequencethiamine pyrophosphokinase3e-1478.6
NC_009615:4304158:431867243186724319331660Parabacteroides distasonis ATCC 8503 chromosome, complete genomehypothetical protein6e-1270.9
NC_000919:545141:558476558476559168693Treponema pallidum subsp. pallidum str. Nichols, complete genomehypothetical protein6e-1270.9
NC_015714:542679:556019556019556711693Treponema paraluiscuniculi Cuniculi A chromosome, complete genomethiamine pyrophosphokinase6e-1270.9
NC_010741:546573:559908559908560600693Treponema pallidum subsp. pallidum SS14, complete genomehypothetical protein6e-1270.9
NC_016842:546661:559996559996560688693Treponema pallidum subsp. pertenue str. SamoaD chromosome, completethiamine pyrophosphokinase6e-1270.9
NC_016843:547149:560484560484561176693Treponema pallidum subsp. pertenue str. Gauthier chromosome,thiamine pyrophosphokinase6e-1270.9
NC_016844:547069:560404560404561096693Treponema pallidum subsp. pallidum DAL-1 chromosome, completethiamine pyrophosphokinase6e-1270.9
NC_016848:547115:560450560450561142693Treponema pallidum subsp. pertenue str. CDC2 chromosome, completethiamine pyrophosphokinase6e-1270.9
NC_017268:546376:559711559711560403693Treponema pallidum subsp. pallidum str. Chicago chromosome,thiamine pyrophosphokinase6e-1270.9
NC_021508:546592:559927559927560619693Treponema pallidum subsp. pallidum SS14, complete genomethiamine pyrophosphokinase6e-1270.9
NC_008054:1194000:120896012089601209643684Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completePutative thiamine pyrophosphokinase1e-1170.1
NC_006347:700838:723011723011723634624Bacteroides fragilis YCH46, complete genomehypothetical protein4e-1168.2
NC_003228:648669:670836670836671459624Bacteroides fragilis NCTC 9343, complete genomehypothetical protein4e-1168.2
NC_017372:1373766:137376613737661374380615Helicobacter pylori India7 chromosome, complete genomethiamine pyrophosphokinase7e-0857.4
NC_017367:1333811:133381113338111334425615Helicobacter pylori F57, complete genomehypothetical protein1e-0756.6
NC_014560:1309470:130947013094701310084615Helicobacter pylori SJM180 chromosome, complete genomethiamine pyrophosphokinase2e-0756.2
NC_000921:1343701:134370113437011344315615Helicobacter pylori J99, complete genomehypothetical protein2e-0755.8
NC_017365:77150:977299772998343615Helicobacter pylori F30, complete genomehypothetical protein2e-0755.8
NC_011498:1345623:134562313456231346237615Helicobacter pylori P12, complete genomehypothetical protein9e-0753.5
NC_017355:1299874:129987412998741300488615Helicobacter pylori v225d chromosome, complete genomethiamine pyrophosphokinase1e-0653.5
NC_017375:1317398:131739813173981318012615Helicobacter pylori 83 chromosome, complete genomethiamine diphosphokinase4e-0651.2