Pre_GI: BLASTP Hits

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Query: NC_017986:5421000:5425080 Pseudomonas putida ND6 chromosome, complete genome

Start: 5425080, End: 5425499, Length: 420

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009512:3118907:313070331307033131053351Pseudomonas putida F1, complete genome7e-63238
NC_016830:5031819:5047281504728150484891209Pseudomonas fluorescens F113 chromosome, complete genomephage integrase5e-36149
NC_016625:1259778:1271811127181112730371227Burkholderia sp. YI23 chromosome 2, complete sequenceBbp502e-1787.8
NC_007650:722961:7284727284727295421071Burkholderia thailandensis E264 chromosome II, complete sequenceBbp507e-1785.9
NC_014910:1765065:177180517718051772131327Alicycliphilus denitrificans BC chromosome, complete genome3e-1373.9
NC_009075:2428248:243627724362772436486210Burkholderia pseudomallei 668 chromosome II, complete sequenceBbp502e-1271.2
NC_011415:2153243:2166033216603321673461314Escherichia coli SE11 chromosome, complete genomephage integrase8e-1268.9
NC_015663:4767443:4791802479180247930821281Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative phage integrase5e-1166.2
NC_011663:2517793:2535804253580425370271224Shewanella baltica OS223 chromosome, complete genomeintegrase family protein2e-1064.7
NC_013971:1927510:193987019398701940574705Erwinia amylovora ATCC 49946 chromosome, complete genomeintegrase (partial)2e-1064.3
NC_013961:1891000:190234319023431903047705Erwinia amylovora, complete genomeTransposase A from transposon Tn5542e-1064.3
NC_009832:2460027:2464528246452824658141287Serratia proteamaculans 568, complete genomeintegrase family protein2e-1064.3
NC_000913:1625500:1649536164953616507321197Escherichia coli K12, complete genomeQin prophage; predicted defective integrase3e-1063.9
AC_000091:1627049:1653226165322616544221197Escherichia coli W3110 DNA, complete genomepredicted defective integrase3e-1063.9
NC_009801:1756610:1777435177743517787151281Escherichia coli E24377A, complete genomesite-specific recombinase, phage integrase family3e-1063.9
CP002516:2305659:2306866230686623081461281Escherichia coli KO11, complete genomeintegrase family protein3e-1063.9
NC_016902:2305659:2306866230686623081461281Escherichia coli KO11FL chromosome, complete genomeintegrase family protein3e-1063.9
NC_020260:1615135:1619923161992316212061284Cronobacter sakazakii Sp291, complete genomehypothetical protein5e-1063.2
NC_009778:1556222:1561010156101015622931284Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein5e-1063.2
NC_013850:2182337:2184415218441521856621248Klebsiella variicola At-22 chromosome, complete genomeintegrase family protein5e-1063.2
NC_013361:2169948:216994821699482170211264Escherichia coli O26:H11 str. 11368 chromosome, complete genomeC-terminus fragment integrase7e-1062.8
NC_007298:1418500:1441002144100214422371236Dechloromonas aromatica RCB, complete genomePhage integrase2e-0961.6
NC_009512:2238437:224324422432442243372129Pseudomonas putida F1, complete genome2e-0961.2
NC_010322:1336231:1341043134104313422961254Pseudomonas putida GB-1 chromosome, complete genomeintegrase family protein2e-0960.8
NC_013364:1183000:1183584118358411848941311Escherichia coli O111:H- str. 11128, complete genomeputative integrase4e-0960.1
NC_013361:1558423:1558998155899815603081311Escherichia coli O26:H11 str. 11368 chromosome, complete genomeintegrase4e-0960.1
NC_008563:1505405:151939815193981519706309Escherichia coli APEC O1, complete genomeputative integrase6e-0959.7
CP002516:2580774:2604076260407626053111236Escherichia coli KO11, complete genomeintegrase family protein8e-0959.3
AC_000091:1407693:1413714141371414149491236Escherichia coli W3110 DNA, complete genomeintegrase8e-0959.3
CP002185:1493280:1500539150053915017741236Escherichia coli W, complete genomeRac prophage; integrase8e-0959.3
NC_000913:1404000:1410024141002414112591236Escherichia coli K12, complete genomeRac prophage; integrase8e-0959.3
NC_010473:1493983:1499420149942015006551236Escherichia coli str. K-12 substr. DH10B, complete genomeRac prophage integrase8e-0959.3
NC_011415:1472500:1475428147542814766631236Escherichia coli SE11 chromosome, complete genomeputative phage integrase8e-0959.3
NC_012759:1296000:1302083130208313033181236Escherichia coli BW2952 chromosome, complete genomeRac prophage; integrase8e-0959.3
NC_016902:2580774:2604076260407626053111236Escherichia coli KO11FL chromosome, complete genomeintegrase family protein8e-0959.3
NC_011294:1465500:146941514694151469723309Salmonella enterica subsp. enterica serovar Enteritidis str8e-0959.3
NC_016612:3314846:3318797331879733200831287Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein8e-0959.3
NC_013446:2961647:299325129932512993778528Comamonas testosteroni CNB-2, complete genomephage integrase7e-0959.3
NC_012947:2366000:2383979238397923852141236Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeintegrase8e-0958.9
NC_012967:1403733:1409170140917014104051236Escherichia coli B str. REL606 chromosome, complete genomeintegrase8e-0958.9
NC_009524:861500:8670058670058682101206Psychrobacter sp. PRwf-1 chromosome, complete genomephage integrase family protein1e-0858.5
NC_013446:1724000:1738058173805817392421185Comamonas testosteroni CNB-2, complete genomephage integrase2e-0858.2
NC_021066:2226826:2249897224989722511861290Raoultella ornithinolytica B6, complete genomeInt protein2e-0857.8
NC_008577:2402165:2417021241702124182441224Shewanella sp. ANA-3 chromosome 1, complete sequencephage integrase family protein2e-0857.8
NC_014121:2745097:2759664275966427609561293Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein2e-0857.8
NC_012917:2641000:265608626560862656853768Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeintegrase family protein2e-0857.4
NC_010645:1496816:1496816149681614979341119Bordetella avium 197N, complete genomephage integrase3e-0857
NC_020063:2449554:2464493246449324655031011Enterobacteriaceae bacterium strain FGI 57, complete genome4e-0856.6
NC_007948:360199:3852723852723866871416Polaromonas sp. JS666, complete genomephage integrase4e-0856.6
NC_012691:1743038:1765544176554417667251182Tolumonas auensis DSM 9187, complete genomeintegrase family protein4e-0856.6
NC_010102:1829357:1836497183649718377891293Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-0856.6
NC_009648:1541699:1542683154268315439211239Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative transposase/integrase7e-0856.2
NC_008577:2818546:2835885283588528370631179Shewanella sp. ANA-3 chromosome 1, complete sequencephage integrase family protein6e-0856.2
NC_012559:854507:8724628724628737121251Laribacter hongkongensis HLHK9, complete genomePhage integrase9e-0855.8
NC_014500:842493:8599108599108610851176Dickeya dadantii 3937 chromosome, complete genomeIntegrase1e-0755.1
NC_008229:1397361:1397361139736113984971137Helicobacter acinonychis str. Sheeba, complete genomebacteriophage-related integrase1e-0755.1
NC_013361:3651150:3656440365644036576151176Escherichia coli O26:H11 str. 11368 chromosome, complete genomeintegrase1e-0755.1
NC_016816:1970189:1974554197455419757321179Pantoea ananatis LMG 5342, complete genomesite-specific recombinase, phage integrase family1e-0755.1
NC_011294:1465500:148182814818281482031204Salmonella enterica subsp. enterica serovar Enteritidis str2e-0754.7
NC_016514:2387312:2410532241053224118181287Enterobacter cloacae EcWSU1 chromosome, complete genomelambdoid prophage Rac integrase3e-0753.9
NC_017372:1212000:1218489121848912196371149Helicobacter pylori India7 chromosome, complete genomebacteriophage-related integrase3e-0753.9
NC_009052:2683447:2697891269789126990691179Shewanella baltica OS155, complete genomephage integrase family protein5e-0753.1
NC_010814:3048441:3064888306488830660631176Geobacter lovleyi SZ, complete genomeintegrase family protein6e-0753.1
NC_015733:2720183:2744616274461627458001185Pseudomonas putida S16 chromosome, complete genomephage integrase9e-0752.4
NC_002927:3716894:3762261376226137634841224Bordetella bronchiseptica RB50, complete genomephage integrase1e-0652
NC_013889:1202385:1215812121581212170501239Thioalkalivibrio sp. K90mix chromosome, complete genomeintegrase family protein2e-0651.2
NC_013941:3300000:3310496331049633116801185Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein2e-0651.2
NC_007650:2429307:244248324424832443055573Burkholderia thailandensis E264 chromosome II, complete sequencebacteriophage integrase family protein4e-0650.1
NC_006138:2288261:2292660229266022938831224Desulfotalea psychrophila LSv54, complete genomesimilar to pore-forming cytotoxin integrase7e-0649.3