Pre_GI: BLASTP Hits

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Query: NC_017328:2153083:2166429 Shigella flexneri 2002017 chromosome, complete genome

Start: 2166429, End: 2167334, Length: 906

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections. This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. Human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. Extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008258:2100646:211399321139932114898906Shigella flexneri 5 str. 8401, complete genomedTDP-rhamnosyl transferase3e-176617
NC_004337:2098736:211212821121282112997870Shigella flexneri 2a str. 301, complete genomedTDP-rhamnosyl transferase1e-168592
NC_004741:2081649:209499520949952095864870Shigella flexneri 2a str. 2457T, complete genomedTDP-rhamnosyl transferase1e-168592
NC_009052:3381943:339144533914453392341897Shewanella baltica OS155, complete genomeglycosyl transferase, family 24e-75281
NC_009512:4408325:443092244309224431842921Pseudomonas putida F1, complete genomeglycosyl transferase, family 27e-69260
NC_007492:4563981:458039245803924581315924Pseudomonas fluorescens PfO-1, complete genomeGlycosyl transferase, family 29e-69260
NC_007517:1468719:149225314922531493155903Geobacter metallireducens GS-15, complete genomeGlycosyl transferase, family 22e-67256
NC_012968:1108687:112638511263851127296912Methylotenera mobilis JLW8, complete genomeglycosyl transferase family 23e-67255
NC_011753:206178:225132225132226067936Vibrio splendidus LGP32 chromosome 1, complete genomeputative dTDP-rhamnosyl transferase2e-63242
NC_015578:247266:269679269679270644966Treponema primitia ZAS-2 chromosome, complete genomedTDP-rhamnosyl transferase RfbG2e-58226
NC_014207:1366766:138117913811791382093915Methylotenera sp. 301 chromosome, complete genomeglycosyl transferase family 22e-56219
NC_009438:2939478:294734329473432948284942Shewanella putrefaciens CN-32 chromosome, complete genomeglycosyl transferase family protein6e-56217
NC_012791:2052923:206799720679972068896900Variovorax paradoxus S110 chromosome 1, complete genomeglycosyl transferase family 26e-49194
NC_019897:4131337:414297841429784143907930Thermobacillus composti KWC4 chromosome, complete genomeglycosyl transferase family protein4e-31135
NC_016641:834500:8377558377558387561002Paenibacillus terrae HPL-003 chromosome, complete genomeglycosyltransferase2e-29129
NC_007492:4563981:457739745773974578386990Pseudomonas fluorescens PfO-1, complete genomeGlycosyl transferase, family 28e-25114
NC_009379:304222:309377309377310345969Polynucleobacter sp. QLW-P1DMWA-1, complete genomeglycosyl transferase, family 25e-24112
NC_009512:4408325:441647844164784417404927Pseudomonas putida F1, complete genomeglycosyl transferase, family 22e-24112
NC_005296:4574213:459355045935504594539990Rhodopseudomonas palustris CGA009, complete genomeputative glycosyltransferase9e-23107
NC_005966:69689:705637056371492930Acinetobacter sp. ADP1, complete genomeputative glycosyl transferase family 21e-22107
NC_004567:1066710:108138010813801082306927Lactobacillus plantarum WCFS1, complete genomeglycosyltransferase (rhamnosyltransferase)1e-22107
NC_014837:2803447:281529928152992816240942Pantoea sp. At-9b chromosome, complete genomefamily 2 glycosyl transferase2e-22106
NC_008781:3688965:369886436988643699796933Polaromonas naphthalenivorans CJ2, complete genomeglycosyl transferase, family 28e-21101
NC_017033:3013654:301873530187353019670936Frateuria aurantia DSM 6220 chromosome, complete genomeglycosyl transferase family protein3e-2099.4
NC_009256:3540531:3567501356750135685591059Burkholderia vietnamiensis G4 chromosome 1, complete sequenceglycosyl transferase family protein5e-2098.6
NC_002678:6232000:625120762512076252139933Mesorhizobium loti MAFF303099, complete genomesimilar to glycosyltransferase4e-2098.6
NC_004578:1153738:1166480116648011674931014Pseudomonas syringae pv. tomato str. DC3000, complete genomeglycosyl transferase, group 2 family protein1e-1997.4
NC_013199:2058857:2072281207228120733001020Lactobacillus rhamnosus Lc 705, complete genomeglycosyltransferase (WelI)4e-1995.5
NC_015975:99500:112224112224113135912Lactobacillus ruminis ATCC 27782 chromosome, complete genomeglycosyltransferase5e-1995.1
NC_012926:727716:738047738047738976930Streptococcus suis BM407 chromosome, complete genomeglycosyltransferase7e-1994.7
NC_009442:1216355:122885712288571229786930Streptococcus suis 05ZYH33 chromosome, complete genomepolysaccharide biosynthesis protein/ rhamnosyl transferase7e-1994.7
NC_012925:1125876:114016511401651141094930Streptococcus suis P1/7, complete genomeglycosyltransferase7e-1994.7
NC_015850:761500:7692867692867718532568Acidithiobacillus caldus SM-1 chromosome, complete genomepolysaccharide biosynthesis protein2e-1893.2
NC_015634:359500:373288373288374190903Bacillus coagulans 2-6 chromosome, complete genomeputative glycosyl transferase4e-1892.4
NC_014836:2723060:273428827342882735223936Desulfurispirillum indicum S5 chromosome, complete genomefamily 2 glycosyl transferase4e-1892.4
NC_017047:1862893:188472918847291885655927Rahnella aquatilis HX2 chromosome, complete genomeglycosyl transferase family protein7e-1891.3
NC_011830:4722607:474615547461554747084930Desulfitobacterium hafniense DCB-2, complete genomeglycosyl transferase family 22e-1789.7
NC_014334:1954333:196242319624231963364942Lactobacillus casei str. Zhang chromosome, complete genomeglycosyl transferase, family 24e-1789
NC_007517:2451547:245694924569492457875927Geobacter metallireducens GS-15, complete genomeGlycosyl transferase, family 28e-1787.8
NC_014207:1366766:138792213879221388848927Methylotenera sp. 301 chromosome, complete genomeglycosyl transferase family 21e-1687.4
NC_009253:3272000:329863832986383299564927Desulfotomaculum reducens MI-1 chromosome, complete genomeglycosyl transferase family protein2e-1686.7
NC_007946:2231872:224323622432362244171936Escherichia coli UTI89, complete genomeputative rhamnosyltransferase2e-1686.7
NC_014727:1877764:189585118958511896762912Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,glycosyl transferase, family 22e-1686.3
NC_009831:3612206:362373936237393624737999Shewanella sediminis HAW-EB3, complete genomeglycosyltransferase-like protein6e-1685.1
NC_004307:1108325:114246811424681143409942Bifidobacterium longum NCC2705, complete genomeprobable glycosyltransferase2e-1583.2
NC_013198:2088780:209897720989772099912936Lactobacillus rhamnosus GG, complete genomepolysaccharide biosynthesis protein / rhamnosyl transferase, glycosyl transferase, family 23e-1582.8
NC_008532:973510:986185986185987093909Streptococcus thermophilus LMD-9, complete genomeGlycosyltransferase involved in cell wall biogenesis6e-1581.6
NC_013714:2086526:212907121290712130012942Bifidobacterium dentium Bd1, complete genomeglycosyl transferase, family 28e-1581.3
NC_009801:2276131:229147622914762292456981Escherichia coli E24377A, complete genomeglycosyl transferase, group 2 family domain protein3e-1479.3
NC_012814:1599241:161710916171091618074966Bifidobacterium animalis subsp. lactis Bl-04, complete genomeglycosyltransferase-like protein3e-1479.3
NC_012815:1603916:161682716168271617792966Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeglycosyltransferase-like protein3e-1479.3
NC_011835:733320:748037748037749002966Bifidobacterium animalis subsp. lactis AD011 chromosome, completeglycosyl transferase family protein3e-1479.3
NC_017214:299637:314349314349315314966Bifidobacterium animalis subsp. lactis BB-12 chromosome, completealpha-L-Rha alpha-1,3-L-rhamnosyltransferase3e-1479.3
NC_017215:1605917:162174316217431622708966Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,Hexosyltransferase3e-1479.3
NC_017216:1603000:161675416167541617719966Bifidobacterium animalis subsp. lactis BLC1, complete genomeglycosyl transferase family 23e-1479.3
NC_017217:1607679:162239616223961623361966Bifidobacterium animalis subsp. lactis V9 chromosome, completeglycosyltransferase-like protein3e-1479.3
NC_013202:59278:7005070050710541005Halomicrobium mukohataei DSM 12286, complete genomeglycosyl transferase family 21e-1377
NC_009615:3308538:332422033242203325068849Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycosyl transferase family protein1e-1377
NC_013173:3679326:369530736953073696035729Desulfomicrobium baculatum DSM 4028, complete genomeglycosyl transferase family 22e-1376.6
NC_009438:2939478:294831129483112949243933Shewanella putrefaciens CN-32 chromosome, complete genomeglycosyl transferase family protein3e-1375.9
NC_011886:2696671:271076427107642711507744Arthrobacter chlorophenolicus A6, complete genomeglycosyl transferase family 24e-1375.5
NC_017068:1788235:180375818037581804687930Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative glycosyl transferase family 2 protein4e-1375.5
NC_015577:3113907:312626631262663127186921Treponema azotonutricium ZAS-9 chromosome, complete genomeputative rhamnosyltransferase6e-1271.6
NC_007614:1633332:1642763164276316437791017Nitrosospira multiformis ATCC 25196 chromosome 1, completeGlycosyl transferase, family 22e-1170.1
NC_014624:1675500:169214616921461692493348Eubacterium limosum KIST612 chromosome, complete genomeglycosyl transferase family protein3e-1169.3
NC_007517:2451547:245911024591102460084975Geobacter metallireducens GS-15, complete genomeGlycosyl transferase, family 25e-1168.6
NC_008260:1015447:102676010267601027725966Alcanivorax borkumensis SK2, complete genomeglycosyl transferase, group 2 family protein, putative1e-1067.8
NC_016077:998741:103797510379751038904930Acidaminococcus intestini RyC-MR95 chromosome, complete genomeglycosyl transferase family protein1e-1067.4
NC_015500:900807:919432919432920187756Treponema brennaborense DSM 12168 chromosome, complete genomeglycosyl transferase family 21e-1067.4
NC_013416:1621469:163062116306211631493873Aggregatibacter actinomycetemcomitans D11S-1, complete genomeglycosyltransferase2e-1067
NC_011979:1590432:161846516184651619178714Geobacter sp. FRC-32, complete genomeglycosyl transferase family 23e-1065.9
NC_013730:5989387:600264860026486003352705Spirosoma linguale DSM 74, complete genomeglycosyl transferase family 24e-1065.5
NC_015975:99500:109044109044109850807Lactobacillus ruminis ATCC 27782 chromosome, complete genomeglycosyltransferase6e-1065.1
NC_007404:1964935:197154619715461972271726Thiobacillus denitrificans ATCC 25259, complete genomeglycosyl transferase, group 2 family protein6e-1065.1
NC_015660:296488:308522308522309496975Geobacillus thermoglucosidasius C56-YS93 chromosome, completefamily 2 glycosyl transferase6e-1065.1
NC_017047:3936624:394657339465733947562990Rahnella aquatilis HX2 chromosome, complete genomefamily 2 glycosyl transferase8e-1064.7
NC_015677:896673:910912910912911904993Ramlibacter tataouinensis TTB310 chromosome, complete genomeb-glycosyltransferase7e-1064.7
NC_013892:4129500:414552841455284146277750Xenorhabdus bovienii SS-2004 chromosome, complete genometeichuronic acid biosynthesis glycosyl transferase tuaG1e-0964.3
NC_008571:2127369:214493521449352145792858Gramella forsetii KT0803, complete genomeglycosyl transferase, family 21e-0963.9
NC_002939:1634843:165438816543881655383996Geobacter sulfurreducens PCA, complete genomeglycosyl transferase, group 2 family protein1e-0963.9
NC_012917:1506083:152325415232541524105852Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeglycosyl transferase family 22e-0963.5
NC_008750:1659095:166141216614121662359948Shewanella sp. W3-18-1, complete genomeglycosyl transferase, family 22e-0963.2
NC_017068:1788235:180725418072541808060807Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative glycosyl transferase family 2 protein4e-0962.4
NC_001264:28266:416434164342629987Deinococcus radiodurans R1 chromosome 2, complete sequenceglycosyltransferase4e-0962.4
NC_014825:165701:187380187380188072693Ruminococcus albus 7 plasmid pRUMAL02, complete sequenceglycosyl transferase family 27e-0961.6
NC_015152:389500:399657399657400418762Spirochaeta sp. Buddy chromosome, complete genomeglycosyl transferase family 26e-0961.6
NC_003910:2175305:218964521896452190409765Colwellia psychrerythraea 34H, complete genomeglycosyl transferase, group 2 family protein6e-0961.6
NC_003901:775500:782580782580783503924Methanosarcina mazei Go1, complete genomeglycosyltransferase1e-0860.8
NC_015873:924392:931784931784932569786Megasphaera elsdenii DSM 20460, complete genomeglycosyl transferase family 21e-0860.8
NC_014758:1207894:121467712146771215615939Calditerrivibrio nitroreducens DSM 19672 chromosome, completeglycosyl transferase family 22e-0860.1
NC_011899:2481229:248783624878362488588753Halothermothrix orenii H 168, complete genomeglycosyl transferase family 22e-0859.7
NC_008577:1579950:159366015936601594409750Shewanella sp. ANA-3 chromosome 1, complete sequenceglycosyl transferase, family 23e-0859.3
NC_014012:1676983:168886616888661689621756Shewanella violacea DSS12, complete genomeglycosyl transferase, group 2 family protein5e-0858.9
NC_009615:3904962:390943439094343910213780Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycosyl transferase family protein4e-0858.9
NC_011884:1541256:1563457156345715646531197Cyanothece sp. PCC 7425, complete genomeglycosyl transferase family 24e-0858.9
NC_007951:740500:753725753725754723999Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative glycosyl transferase4e-0858.9
NC_012969:142000:148882148882149856975Methylovorus glucosetrophus SIP3-4 chromosome, complete genomefamily 2 glycosyl transferase5e-0858.5
NC_014541:1165991:118104611810461181759714Ferrimonas balearica DSM 9799 chromosome, complete genomeglycosyl transferase family 26e-0858.5
NC_014650:376070:3885773885773897491173Geobacillus sp. Y4.1MC1 chromosome, complete genomefamily 2 glycosyl transferase9e-0857.8
NC_011884:1821862:183484618348461835769924Cyanothece sp. PCC 7425, complete genomeglycosyl transferase family 21e-0757.4
NC_011566:1639444:1656867165686716579461080Shewanella piezotolerans WP3, complete genomeGlycosyl transferase, family 22e-0757
NC_006138:23902:383483834839298951Desulfotalea psychrophila LSv54, complete genomesimilar to glycosyl transferase2e-0756.6
NC_007512:865500:881165881165882154990Pelodictyon luteolum DSM 273, complete genomeGlycosyltransferase involved in cell wall biogenesis-like2e-0756.6
NC_009778:1141716:115913011591301159894765Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-0756.6
NC_016613:221476:242155242155242931777Vibrio sp. EJY3 chromosome 1, complete sequenceglycosyl transferase family protein3e-0756.2
NC_002695:2769387:278649227864922787274783Escherichia coli O157:H7 str. Sakai, complete genomeputative glycosyl transferase7e-0755.1
NC_002655:2839600:285670628567062857488783Escherichia coli O157:H7 EDL933, complete genomeglycosyl transferase7e-0755.1
NC_011353:2734222:275132727513272752109783Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeWbdN7e-0755.1
NC_013008:2733203:275030827503082751090783Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeglycosyl transferase7e-0755.1
NC_013959:2892660:2903948290394829050271080Sideroxydans lithotrophicus ES-1 chromosome, complete genomeglycosyl transferase family 27e-0755.1
NC_019745:3217552:3227223322722332282631041Gloeocapsa sp. PCC 7428, complete genomeglycosyl transferase family 26e-0755.1
NC_014958:3131191:315277231527723153704933Deinococcus maricopensis DSM 21211 chromosome, complete genomefamily 2 glycosyl transferase6e-0755.1
NC_004347:3303957:331897333189733319869897Shewanella oneidensis MR-1, complete genomeglycosyl transferase, group 2 family protein8e-0754.7
NC_010424:1778459:1789014178901417900241011Candidatus Desulforudis audaxviator MP104C, complete genomeglycosyl transferase, family 29e-0754.7
NC_016001:865666:883581883581884462882Flavobacterium branchiophilum, complete genomeglycosyl transferase, group 2 family protein1e-0654.3
NC_011415:2346474:235657423565742357341768Escherichia coli SE11 chromosome, complete genomeputative glycosyltransferase1e-0654.3
NC_011884:2051723:207109620710962072088993Cyanothece sp. PCC 7425, complete genomeglycosyl transferase family 21e-0654.3
NC_009483:2640403:271516827151682716118951Geobacter uraniireducens Rf4 chromosome, complete genomeglycosyl transferase family protein9e-0754.3
NC_011901:2466360:2496720249672024977541035Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeglycosyl transferase family protein1e-0653.9
NC_011593:2288993:2321633232163323226821050Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,family 2 glycosyl transferase1e-0653.9
NC_021175:1973880:198555519855551986511957Streptococcus oligofermentans AS 1.3089, complete genomeglycosyltransferase2e-0653.5
NC_013740:660880:666425666425667195771Acidaminococcus fermentans DSM 20731, complete genomeglycosyl transferase family 22e-0653.1
NC_008228:3679949:3700069370006937012771209Pseudoalteromonas atlantica T6c, complete genomeglycosyl transferase, family 23e-0653.1
NC_012731:3500545:3510667351066735118751209Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein3e-0652.8
NC_009483:1936486:1951821195182119529181098Geobacter uraniireducens Rf4 chromosome, complete genomeglycosyl transferase family protein4e-0652.4
NC_002939:2454686:245899824589982459972975Geobacter sulfurreducens PCA, complete genomeglycosyl transferase, group 2 family protein4e-0652.4
NC_008740:1815743:184283918428391843732894Marinobacter aquaeolei VT8, complete genomeglycosyl transferase, family 24e-0652.4
NC_015578:1633393:165632716563271657085759Treponema primitia ZAS-2 chromosome, complete genomeglycosyltransferase5e-0652
NC_017243:1652000:1662489166248916637241236Brachyspira intermedia PWS/A chromosome, complete genomehypothetical protein5e-0652
NC_015152:389500:416508416508417476969Spirochaeta sp. Buddy chromosome, complete genomeglycosyl transferase family 25e-0652
NC_017068:638868:646951646951647709759Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative glycosyl transferase family 2 protein6e-0651.6
NC_020829:5174354:521022352102235210966744Pseudomonas denitrificans ATCC 13867, complete genometeichuronic acid biosynthesis7e-0651.6
NC_008054:1617544:163185116318511632756906Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeEpsIIG, Putative glycosyltransferase8e-0651.2
NC_016818:3887000:389527038952703896259990Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeglycosyl transferase family protein8e-0651.2