Pre_GI Gene

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Host: NC_011353 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011353:2734222 Escherichia coli O157:H7 str. EC4115 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is associated with Hamburger disease, which is caused by the contamination of meat products by enterohemorrhagic E. coli (EHEC). The identifier O157:H7 refers to the serotype of EHEC, and reflects the specific antigenic markers found on the surface of the cell. EHEC attaches and effaces to cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
27342222735199978chain length determinant proteinQuickGO ontologyBLASTP
273534527365111167UDP-glucose 6-dehydrogenaseQuickGO ontologyBLASTP
2736760273816614076-phosphogluconate dehydrogenaseQuickGO ontologyBLASTP
27399242740037114hypothetical protein
274029527416651371phosphomannomutaseQuickGO ontologyBLASTP
274166927431171449mannose-1-phosphate guanylyltransferasemannose-6-phosphate isomeraseQuickGO ontologyBLASTP
27430992743608510GDP-mannose mannosyl hydrolaseQuickGO ontologyBLASTP
27436112744576966GDP-L-fucose synthetaseQuickGO ontologyBLASTP
274457927456971119GDP-mannose 46-dehydrataseQuickGO ontologyBLASTP
274571727469311215WbdPQuickGO ontologyBLASTP
274695627480501095DegTDnrJEryC1StrS family aminotransferaseQuickGO ontologyBLASTP
274805327494381386O antigen flippaseQuickGO ontologyBLASTP
27494312750177747WbdOQuickGO ontologyBLASTP
275014627513301185O antigen polymeraseQuickGO ontologyBLASTP
27513272752109783WbdNQuickGO ontologyBLASTP
27524282753321894UTP--glucose-1-phosphate uridylyltransferase subunit GalFQuickGO ontologyBLASTP
27535642754559996UDP-N-acetylglucosamine 4-epimeraseQuickGO ontologyBLASTP
275471727561111395colanic acid biosynthesis proteinQuickGO ontologyBLASTP
275612227573421221colanic acid biosynthesis glycosyl transferase WcaLQuickGO ontologyBLASTP
275733927586191281pyruvyl transferaseQuickGO ontologyBLASTP
275879927602771479colanic acid exporterQuickGO ontologyBLASTP
276027927616731395UDP-glucose lipid carrier transferaseQuickGO ontologyBLASTP
276172827630981371phosphomannomutaseQuickGO ontologyBLASTP
27631242763282159hypothetical proteinBLASTP
276329127647271437mannose-1-phosphate guanylyltransferaseQuickGO ontologyBLASTP