Pre_GI: BLASTP Hits

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Query: NC_016845:1407339:1429403 Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,

Start: 1429403, End: 1431514, Length: 2112

Host Lineage: Klebsiella pneumoniae; Klebsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism is the most medically important organism within the genus Klebsiella. It is an environmental organism found in water, soil, and on the surface of plants. Several strains have been isolated from plant tissues and are nitrogen-fixing endophytes that may be a source of nitrogen for the plant. Other strains can become opportunistic pathogens which infect humans, and typically causes hospital-acquired infections in immunocompromised patients. Major sites of infection include the lungs, where it causes a type of pneumonia, and urinary tract infections. Klebsiella can also enter the bloodstream (bacterimia) and cause sepsis. The pathogen can also infect animals and cause inflammation of the uterus in horses as well as more generalized infections in other mammals. This organism expresses numerous pathogenicity factors, including multiple adhesins, capsular polysaccharide, siderophores, and lipopolysaccharide for the evasion of host defenses. The multiple antibiotic resistance genes carried on the chromosome inhibit efforts to clear the organism from infected patients via antibiotic use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:4604283:4624283462428346270482766Salmonella enterica subsp. enterica serovar Enteritidis strtranscriptional regulatory protein1e-99364
NC_011205:4761598:4781590478159047843552766Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853sigma-54 interaction domain-containing protein2e-99363
NC_011274:4577402:4597534459753446002992766Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91transcriptional regulator1e-98360
NC_016023:875416:8899488899488922542307Bacillus coagulans 36D1 chromosome, complete genomesigma-54 factor interaction domain-containing protein1e-59231
NC_015425:841754:8602118602118629792769Clostridium botulinum BKT015925 chromosome, complete genomesigma-54 factor, interaction domain-containing protein2e-59231
NC_016612:2902628:2924388292438829272642877Klebsiella oxytoca KCTC 1686 chromosome, complete genomeLevR transcriptional regulator4e-56219
NC_015975:1936504:1954422195442219572562835Lactobacillus ruminis ATCC 27782 chromosome, complete genometranscriptional regulator4e-55216
NC_009617:4436837:4453694445369444564892796Clostridium beijerinckii NCIMB 8052 chromosome, complete genomesigma-54 factor interaction domain-containing protein2e-52207
NC_021182:3771523:3788403378840337911982796Clostridium pasteurianum BC1, complete genometranscriptional antiterminator3e-51203
NC_009617:648000:6487406487406516222883Clostridium beijerinckii NCIMB 8052 chromosome, complete genomesigma-54 factor interaction domain-containing protein2e-42174
NC_013316:2585666:2601017260101726039412925Clostridium difficile R20291, complete genomeputative sigma-54 interacting transcription antiterminator4e-42173
NC_013315:2505792:2520461252046125233852925Clostridium difficile CD196 chromosome, complete genomesigma-54 interacting transcription antiterminator4e-42173
NC_017179:2513804:2528473252847325313972925Clostridium difficile BI1, complete genomesigma-54 interacting transcription antiterminator4e-42173
NC_011149:4474012:4495750449575044984702721Salmonella enterica subsp. enterica serovar Agona str. SL483,sigma-54 factor, interaction domain-containing protein1e-40168
NC_020063:4653422:4663834466383446664342601Enterobacteriaceae bacterium strain FGI 57, complete genometranscriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain1e-39165
NC_014377:1897857:1912112191211219147452634Thermosediminibacter oceani DSM 16646 chromosome, complete genomePTS system transcriptional activator8e-38159
NC_016023:1769925:1784157178415717855751419Bacillus coagulans 36D1 chromosome, complete genomehypothetical protein2e-34147
NC_009792:4693152:4712664471266447154622799Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-28127
NC_003197:3971905:3972549397254939753472799Salmonella typhimurium LT2, complete genomeputative transcriptional regulator1e-27125
NC_017046:3991551:3992691399269139954892799Salmonella enterica subsp. enterica serovar Typhimurium str. 798NtrC-family transcriptional regulator2e-27125
NC_016863:3933848:3933848393384839366462799Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transcriptional regulator2e-27125
NC_016857:3993864:3993864399386439966622799Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74sigma-54 dependent transcription regulator2e-27125
NC_016856:3985597:3986241398624139890392799Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transcriptional regulator2e-27125
NC_016810:3993863:3993863399386339966612799Salmonella enterica subsp. enterica serovar Typhimurium strputative NtrC family transcriptional regulator2e-27125
NC_016860:3995445:3995445399544539982432799Salmonella enterica subsp. enterica serovar Typhimurium strsigma-54 dependent transcriptional regulator1e-27125
NC_011080:3941909:3941909394190939447072799Salmonella enterica subsp. enterica serovar Newport str. SL254,sigma-54 dependent transcription regulator1e-27125
NC_011149:3895921:3897061389706138998592799Salmonella enterica subsp. enterica serovar Agona str. SL483,sigma-54 dependent transcription regulator1e-27125
NC_014377:1400544:1412036141203614149962961Thermosediminibacter oceani DSM 16646 chromosome, complete genomePTS system transcriptional activator1e-27125
NC_010102:3919999:3920643392064339234412799Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-27125
NC_012125:3905782:3905782390578239085802799Salmonella enterica subsp. enterica serovar Paratyphi C strainNtrC family transcriptional regulators, ATPase domain protein1e-27125
NC_011083:3985618:3986758398675839895562799Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,sigma-54 dependent transcription regulator1e-27125
NC_011147:3755725:3756369375636937591672799Salmonella enterica subsp. enterica serovar Paratyphi A strNtrC family transcriptional regulator1e-27125
NC_006511:3759550:3760690376069037634882799Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative NtrC family transcriptional regulators, ATPase domain1e-27125
NC_011094:3853036:3853036385303638558342799Salmonella enterica subsp. enterica serovar Schwarzengrund strsigma-54 dependent transcription regulator3e-27124
NC_009617:234782:2490212490212519452925Clostridium beijerinckii NCIMB 8052 chromosome, complete genomesigma-54 factor interaction domain-containing protein4e-27123
NC_016023:875416:886432886432887055624Bacillus coagulans 36D1 chromosome, complete genomePRD domain-containing protein1e-26122
NC_020291:5409587:5427215542721554299472733Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometranscriptional antiterminator1e-26122
NC_005945:4898841:4926015492601549286902676Bacillus anthracis str. Sterne, complete genometranscription antiterminator, BglG family2e-26121
NC_003909:4854379:4897771489777148988471077Bacillus cereus ATCC 10987, complete genometranscription antiterminator, BglG family3e-26120
NC_019978:2532640:2552799255279925555342736Halobacteroides halobius DSM 5150, complete genometranscriptional antiterminator1e-24115
NC_003909:4854379:4898801489880149004531653Bacillus cereus ATCC 10987, complete genometranscription antiterminator, BglG family3e-1894.4
NC_014926:875948:8895858895858909041320Thermovibrio ammonificans HB-1 chromosome, complete genometwo component, sigma54 specific, transcriptional regulator, Fis family1e-0965.9
NC_011979:3712845:3723132372313237245051374Geobacter sp. FRC-32, complete genometwo component, sigma54 specific, transcriptional regulator, Fis family4e-0860.5
NC_002939:1634843:1640718164071816420941377Geobacter sulfurreducens PCA, complete genomesigma-54 dependent DNA-binding response regulator1e-0759.3
NC_016023:1769925:178557217855721786186615Bacillus coagulans 36D1 chromosome, complete genomePRD domain-containing protein1e-0758.9
NC_014098:2971011:2973339297333929747931455Bacillus tusciae DSM 2912 chromosome, complete genomeputative sigma54 specific transcriptional regulator4e-0757.4
NC_009454:489954:4958254958254972611437Pelotomaculum thermopropionicum SI, complete genometranscriptional regulator7e-0756.6
NC_011769:787496:8097648097648111251362Desulfovibrio vulgaris str. 'Miyazaki F', complete genometwo component, sigma54 specific, transcriptional regulator, Fis family1e-0655.5
NC_008593:2136759:2153232215323221551271896Clostridium novyi NT, complete genomeSignal-transduction and transcriptional-control protein1e-0655.5
NC_013939:724469:7407637407637420551293Deferribacter desulfuricans SSM1, complete genometwo-component system, NtrC family, response regulator AtoC2e-0655.1
NC_007517:1561466:1565515156551515668911377Geobacter metallireducens GS-15, complete genometwo component, sigma54 specific, transcriptional regulator, Fis family6e-0653.1
NC_011660:366000:3838363838363852031368Listeria monocytogenes HCC23 chromosome, complete genomesigma-54 dependent transcriptional regulator9e-0652.8
NC_003212:2293425:2295238229523822966051368Listeria innocua Clip11262, complete genomehypothetical protein1e-0552.8