Pre_GI: BLASTP Hits

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Query: NC_016830:4809210:4809210 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 4809210, End: 4810106, Length: 897

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012660:3744868:376016837601683761127960Pseudomonas fluorescens SBW25 chromosome, complete genomeputative betalactamase2e-125449
NC_007802:1991211:200289420028942003718825Jannaschia sp. CCS1, complete genomebeta-lactamase1e-49196
NC_016622:282631:2944242944242955451122Azospirillum lipoferum 4B, complete genomeputative Beta-lactamase5e-28124
NC_002939:1505701:1506745150674515077581014Geobacter sulfurreducens PCA, complete genomebeta-lactamase2e-21103
NC_010546:3071377:3073581307358130789535373Cyanothece sp. ATCC 51142 chromosome circular, complete sequencehypothetical protein3e-1686.3
NC_014622:4922977:4980081498008149812381158Paenibacillus polymyxa SC2 chromosome, complete genomed-alanyl-d-alanine carboxypeptidase (penicillin-binding protein)8e-1581.3
NC_014666:4547873:4548457454845745496651209Frankia sp. EuI1c chromosome, complete genomebeta-lactamase2e-1376.6
NC_013757:2630000:2641547264154726427971251Geodermatophilus obscurus DSM 43160, complete genomebeta-lactamase1e-1273.9
NC_013729:4871430:4887632488763248887861155Kribbella flavida DSM 17836, complete genomebeta-lactamase2e-1170.5
NC_013947:3534209:3552144355214435533941251Stackebrandtia nassauensis DSM 44728 chromosome, complete genomebeta-lactamase5e-1168.9
NC_016935:7426389:7436208743620874383642157Paenibacillus mucilaginosus 3016 chromosome, complete genomealkaline D-peptidase, serine peptidase, merops family s126e-1168.6
NC_015690:7334786:7344146734414673463052160Paenibacillus mucilaginosus KNP414 chromosome, complete genomealkaline D-peptidase; serine peptidase; merops family s128e-1167.8
NC_020126:6019850:6033705603370560351741470Myxococcus stipitatus DSM 14675, complete genomebeta-lactamase5e-1065.1
NC_012491:6143928:6165290616529061664741185Brevibacillus brevis NBRC 100599, complete genomeputative D-stereospecific peptide hydrolase7e-1064.7
NC_017186:3947874:3965203396520339662941092Amycolatopsis mediterranei S699 chromosome, complete genomebeta-lactamase class C8e-1064.7
NC_014318:3947845:3965174396517439662651092Amycolatopsis mediterranei U32 chromosome, complete genomebeta-lactamase class C8e-1064.7
NC_015953:3456535:3504980350498035061971218Streptomyces sp. SirexAA-E chromosome, complete genomebeta-lactamase1e-0964.3
NC_020126:6019850:6035252603525260367211470Myxococcus stipitatus DSM 14675, complete genomebeta-lactamase1e-0963.5
NC_014623:9492000:9492963949296394941681206Stigmatella aurantiaca DW4/3-1 chromosome, complete genomebeta-lactamase family protein2e-0963.5
NC_013222:1659619:1667037166703716683261290Robiginitalea biformata HTCC2501, complete genomeBeta-lactamase2e-0963.2
NC_009380:2310000:2315040231504023163051266Salinispora tropica CNB-440 chromosome, complete genomeSerine-type D-Ala-D-Ala carboxypeptidase2e-0963.2
NC_013222:1659619:1664564166456416656551092Robiginitalea biformata HTCC2501, complete genomebeta-lactamase precursor2e-0963.2
NC_013235:402819:4080774080774092221146Nakamurella multipartita DSM 44233, complete genomebeta-lactamase2e-0963.2
NC_015957:7348269:7389614738961473908401227Streptomyces violaceusniger Tu 4113 chromosome, complete genomebeta-lactamase5e-0962
NC_014165:374674:3916893916893931371449Thermobispora bispora DSM 43833 chromosome, complete genomebeta-lactamase7e-0961.6
NC_020126:8984500:8988091898809189894581368Myxococcus stipitatus DSM 14675, complete genomebeta-lactamase1e-0860.8
NC_000868:133451:1380441380441393871344Pyrococcus abyssi GE5, complete genomehypothetical beta-lactamase precursor (penicillin-binding protein)1e-0860.8
NC_013406:3672857:367881836788183679288471Paenibacillus sp. Y412MC10 chromosome, complete genomeserine-type D-Ala-D-Ala carboxypeptidase1e-0860.5
NC_013595:5282207:5289928528992852914721545Streptosporangium roseum DSM 43021, complete genomeBeta-lactamase class C and other penicillin binding protein-like protein2e-0860.1
NC_019673:189487:2064942064942076901197Saccharothrix espanaensis DSM 44229 complete genomeAlkaline D-peptidase3e-0859.7
NC_004578:5269194:527426752742675275259993Pseudomonas syringae pv. tomato str. DC3000, complete genomealkaline D-peptidase, putative3e-0859.3
NC_011894:3090000:3093219309321930944901272Methylobacterium nodulans ORS 2060, complete genomebeta-lactamase3e-0859.3
NC_013510:1295439:1299340129934013007191380Thermomonospora curvata DSM 43183, complete genomebeta-lactamase5e-0858.5
NC_014834:959986:9909259909259921991275Rhodopseudomonas palustris DX-1 chromosome, complete genomebeta-lactamase6e-0858.5
NC_015957:7348269:7376981737698173782641284Streptomyces violaceusniger Tu 4113 chromosome, complete genomebeta-lactamase1e-0757.4
NC_009438:2058566:2067437206743720686301194Shewanella putrefaciens CN-32 chromosome, complete genomebeta-lactamase2e-0757
NC_009664:4377777:4377777437777743790301254Kineococcus radiotolerans SRS30216, complete genomeSerine-type D-Ala-D-Ala carboxypeptidase2e-0756.6
NC_014032:338547:3649483649483661081161Salinibacter ruber M8 chromosome, complete genomebeta-lactamase2e-0756.6
NC_015690:4361000:4424844442484444259951152Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAlkaline D-peptidase and alkaline D-peptidase fusion3e-0756.2
NC_014934:2482934:2496052249605224971281077Cellulophaga algicola DSM 14237 chromosome, complete genomebeta-lactamase4e-0755.8
NC_018678:2140182:215831521583152159238924Alteromonas macleodii str. 'English Channel 673' chromosome,beta-lactamase4e-0755.8
NC_018679:2211000:222225022222502223161912Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completebeta-lactamase5e-0755.5
NC_016935:4117485:4190913419091341920641152Paenibacillus mucilaginosus 3016 chromosome, complete genomealkaline D-peptidase5e-0755.5
NC_017075:1970168:1993557199355719946571101Rubrivivax gelatinosus IL144, complete genomeputative S12 family peptidase5e-0755.5
NC_006177:324363:3377843377843389351152Symbiobacterium thermophilum IAM 14863, complete genomeputative beta-lactamase6e-0755.1
NC_012207:477500:4784754784754797041230Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative lipoprotein1e-0654.3
NC_002755:472872:4774184774184786471230Mycobacterium tuberculosis CDC1551, complete genomelipoprotein, putative1e-0654.3
NC_009565:479500:4804974804974817261230Mycobacterium tuberculosis F11, complete genomelipoprotein lpqK1e-0654.3
NC_000962:475816:4773274773274785561230Mycobacterium tuberculosis H37Rv, complete genomePOSSIBLE CONSERVED LIPOPROTEIN LPQK1e-0654.3
NC_016582:9076686:9095636909563690968111176Streptomyces bingchenggensis BCW-1 chromosome, complete genomebeta-lactamase1e-0654.3
NC_002947:1268089:1291208129120812923531146Pseudomonas putida KT2440, complete genomecarboxylesterase1e-0654.3
NC_009525:477093:4786374786374798661230Mycobacterium tuberculosis H37Ra, complete genomeputative conserved lipoprotein LpqK1e-0654.3
NC_008769:507000:5081425081425093711230Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative lipoprotein lpqK1e-0654.3
NC_002945:476835:4783464783464795751230Mycobacterium bovis AF2122/97, complete genomelipoprotein LpqK1e-0654.3
NC_013854:1277106:1279428127942812806001173Azospirillum sp. B510, complete genomebeta-lactamase1e-0654.3
NC_015957:7348269:7390957739095773921741218Streptomyces violaceusniger Tu 4113 chromosome, complete genomebeta-lactamase1e-0654.3
NC_017026:476500:4776274776274788561230Mycobacterium tuberculosis RGTB327 chromosome, complete genomelipoprotein1e-0654.3
NC_016804:477500:4784764784764797051230Mycobacterium bovis BCG str. Mexico chromosome, complete genomeputative lipoprotein1e-0654.3
NC_016768:476500:4775864775864788151230Mycobacterium tuberculosis KZN 4207 chromosome, complete genomelipoprotein LpqK1e-0654.3
NC_012943:476500:4775864775864788151230Mycobacterium tuberculosis KZN 1435 chromosome, complete genomehypothetical protein1e-0654.3
NC_008228:2295841:2305171230517123062801110Pseudoalteromonas atlantica T6c, complete genomebeta-lactamase1e-0653.9
NC_012489:3503632:3505547350554735073461800Gemmatimonas aurantiaca T-27, complete genomebeta-lactamase family protein1e-0653.9
NC_009954:117895:1406611406611420221362Caldivirga maquilingensis IC-167, complete genomebeta-lactamase1e-0653.9
NC_008536:3160540:3184645318464531858501206Solibacter usitatus Ellin6076, complete genomebeta-lactamase2e-0653.5
NC_013947:3347174:3367138336713833685021365Stackebrandtia nassauensis DSM 44728 chromosome, complete genomebeta-lactamase2e-0653.5
NC_013947:460398:4867104867104878551146Stackebrandtia nassauensis DSM 44728 chromosome, complete genomebeta-lactamase2e-0653.5
NC_015848:483500:4846164846164858451230Mycobacterium canettii CIPT 140010059, complete genomeputative lipoprotein LPQK2e-0653.1
NC_019950:481881:4836654836654848941230Mycobacterium canettii CIPT 140060008 complete genomeConserved lipoprotein of unknown function, lipoprotein LpqK2e-0653.1
NC_014614:2359046:2373331237333123743411011Clostridium sticklandii, complete genomePenicillin-binding protein2e-0653.1
NC_015151:2285175:5134513464891356Vulcanisaeta moutnovskia 768-28 chromosome, complete genomebeta-lactamase3e-0652.8
NC_017955:3670670:3673887367388736748911005Modestobacter marinus, complete genomeserine-type D-Ala-D-Ala carboxypeptidase6e-0652
NC_010397:1802724:1802724180272418068484125Mycobacterium abscessus chromosome Chromosome, complete sequenceBacteriophage protein5e-0652
NC_013169:1058463:1062742106274210640071266Kytococcus sedentarius DSM 20547, complete genomepenicillin-binding protein, beta-lactamase class C7e-0651.6
NC_013406:3975512:3992797399279739942751479Paenibacillus sp. Y412MC10 chromosome, complete genomebeta-lactamase7e-0651.6
NC_013757:1888850:1916158191615819174141257Geodermatophilus obscurus DSM 43160, complete genomebeta-lactamase7e-0651.6
NC_014816:545441:5637285637285654191692Asticcacaulis excentricus CB 48 chromosome 1, complete sequencebeta-lactamase8e-0651.2