Pre_GI: BLASTP Hits

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Query: NC_016830:3230939:3252650 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 3252650, End: 3253285, Length: 636

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:3736500:373985837398583740493636Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative transport-related LysE family membrane protein7e-116416
NC_014640:4031336:403657340365734037202630Achromobacter xylosoxidans A8 chromosome, complete genomelysine transporter LysE4e-51201
NC_014838:218000:220948220948221580633Pantoea sp. At-9b plasmid pPAT9B01, complete sequencelysine exporter protein LysE/YggA1e-50199
NC_008596:3404832:343695534369553437581627Mycobacterium smegmatis str. MC2 155, complete genomeRhtB family protein transporter8e-36150
NC_016816:3952000:395472839547283955354627Pantoea ananatis LMG 5342, complete genomelysine exporter protein (LysE/YggA)8e-30130
NC_013956:595320:625835625835626461627Pantoea ananatis LMG 20103 chromosome, complete genomeYahN3e-29128
NC_017078:179848:181927181927182550624Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC1,putative lysine exporter protein3e-1271.6
NC_011740:2737467:273961227396122740244633Escherichia fergusonii ATCC 35469, complete genomeneutral amino-acid efflux system2e-1168.9
NC_015856:4975815:497693449769344977557624Collimonas fungivorans Ter331 chromosome, complete genomelysine exporter protein LysE/YggA6e-1167.8
NC_016944:1504888:151527415152741515912639Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein7e-1063.9
NC_016445:984856:995241995241995879639Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein7e-1063.9
NC_012668:2115228:212518721251872125825639Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein7e-1063.9
NC_002505:1507860:151824615182461518884639Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein7e-1063.9
NC_014532:1481787:150940215094021510139738Halomonas elongata DSM 2581, complete genomelysine exporter protein (LysE/YggA)8e-1063.9
NC_009457:1068000:107666710766671077305639Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein2e-0962.8
NC_012578:1465302:147568814756881476326639Vibrio cholerae M66-2 chromosome I, complete sequencehypothetical protein2e-0962.8
NC_004547:913553:918802918802919428627Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative amino acid efflux protein2e-0962.8
NC_016602:2037162:204777620477762048414639Vibrio furnissii NCTC 11218 chromosome 1, complete sequencethreonine efflux protein1e-0962.8
NC_008095:6323456:634453563445356345170636Myxococcus xanthus DK 1622, complete genomehomoserine/threonine efflux protein1e-0962.8
NC_020210:2969862:297081429708142971440627Geobacillus sp. GHH01, complete genomelysine exporter protein3e-0962
NC_020210:661236:665046665046665687642Geobacillus sp. GHH01, complete genomeamino acid transporter3e-0962
NC_013592:3618248:363092036309203631549630Dickeya dadantii Ech586, complete genomeLysine exporter protein (LYSE/YGGA)8e-0960.5
NC_014915:3039639:304072030407203041346627Geobacillus sp. Y412MC52 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)7e-0960.5
NC_012997:4152938:416505841650584165681624Teredinibacter turnerae T7901, complete genometranslocator protein, LysE family9e-0960.1
NC_007005:98488:101677101677102312636Pseudomonas syringae pv. syringae B728a, complete genomeLysine exporter protein (LYSE/YGGA)1e-0860.1
NC_003295:856775:858719858719859351633Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSMEMBRANE PROTEIN1e-0860.1
NC_015711:8169752:820575582057558206390636Myxococcus fulvus HW-1 chromosome, complete genomehomoserine/threonine efflux protein2e-0859.7
NC_007498:919697:928223928223928849627Pelobacter carbinolicus DSM 2380, complete genomeamino acid efflux/transport protein1e-0859.7
NC_012880:1127997:113352811335281134226699Dickeya dadantii Ech703, complete genomeLysine exporter protein (LYSE/YGGA)2e-0859.3
NC_013456:1819421:182398218239821824617636Vibrio sp. Ex25 chromosome 1, complete genomethreonine efflux protein3e-0858.5
NC_004557:2289135:231194223119422312616675Clostridium tetani E88, complete genomehomoserine/homoserine lactone efflux protein3e-0858.5
NC_007510:973828:974480974480975202723Burkholderia sp. 383 chromosome 1, complete sequenceLysine exporter family protein (LYSE/YGGA)3e-0858.5
NC_002505:168532:197130197130197798669Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein7e-0857.4
NC_016445:2593800:262239826223982623066669Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein7e-0857.4
NC_016944:168530:197140197140197808669Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein7e-0857.4
NC_014364:3238374:323837432383743239072699Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)6e-0857.4
NC_009328:2905000:290504229050422905710669Geobacillus thermodenitrificans NG80-2 chromosome, complete genomehomoserine/homoserine lactone efflux protein7e-0857.4
NC_016593:762216:782155782155782796642Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehomoserine/homoserine lactone efflux transporter (RhtB family)9e-0857
NC_015588:2200517:221407022140702214711642Isoptericola variabilis 225 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)1e-0756.6
NC_006510:1731939:174417217441721744792621Geobacillus kaustophilus HTA426, complete genomehypothetical protein1e-0756.6
NC_012856:207194:209129209129209770642Ralstonia pickettii 12D chromosome 1, complete genomeLysine exporter protein (LYSE/YGGA)2e-0756.2
NC_020064:1409596:141547114154711416103633Serratia marcescens FGI94, complete genomeputative threonine efflux protein2e-0756.2
NC_009328:1651812:167643616764361677059624Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeamino acid efflux protein2e-0755.8
NC_015061:2927707:293701329370132937630618Rahnella sp. Y9602 chromosome, complete genomelysine exporter protein (LYSE/YGGA)2e-0755.8
NC_017047:2957957:296726329672632967880618Rahnella aquatilis HX2 chromosome, complete genomelysine exporter protein LysE/YggA2e-0755.8
NC_015410:2505168:251246825124682513082615Pseudomonas mendocina NK-01 chromosome, complete genomelysine exporter protein LysE/YggA2e-0755.8
NC_012881:3520956:353147035314703532084615Desulfovibrio salexigens DSM 2638, complete genomeLysine exporter protein (LYSE/YGGA)4e-0755.1
NC_014562:1402863:141988914198891420533645Pantoea vagans C9-1 chromosome, complete genomePutative RhtB family transporter5e-0754.7
NC_012660:2143376:218936921893692189986618Pseudomonas fluorescens SBW25 chromosome, complete genomeputative amino acid transporter-like protein4e-0754.7
NC_020210:2969862:297178829717882972420633Geobacillus sp. GHH01, complete genomeputative transporter6e-0754.3
NC_020181:1653261:167123416712341671878645Enterobacter aerogenes EA1509E, complete genomePutative transport protein6e-0754.3
NC_014153:2187409:219840521984052199016612Thiomonas intermedia K12 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)7e-0753.9
NC_020260:2725201:273941027394102740054645Cronobacter sakazakii Sp291, complete genomeleucine export protein LeuE7e-0753.9
NC_016514:1142607:115079911507991151443645Enterobacter cloacae EcWSU1 chromosome, complete genomeLeucine efflux protein1e-0653.5
NC_013947:4695000:469699346969934697640648Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)1e-0653.5
NC_007802:1991211:200400820040082004634627Jannaschia sp. CCS1, complete genomeLysine exporter protein (LYSE/YGGA)9e-0753.5
NC_013850:2182337:224120422412042241848645Klebsiella variicola At-22 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)1e-0653.1
NC_012997:4152938:416375341637534164373621Teredinibacter turnerae T7901, complete genometranslocator protein, LysE family1e-0653.1
NC_015947:223184:231035231035231670636Burkholderia sp. JV3 chromosome, complete genomelysine exporter protein LysE/YggA1e-0653.1
NC_004603:1464000:146416614641661464825660Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeputative homoserine/homoserine lactone efflux protein1e-0653.1
NC_016113:887582:904671904671905300630Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequencelactone efflux transmembrane protein1e-0653.1
NC_010545:1475410:147625414762541476907654Corynebacterium urealyticum DSM 7109, complete genomeputative threonine efflux protein.2e-0652.8
NC_016613:1805907:182610618261061826753648Vibrio sp. EJY3 chromosome 1, complete sequenceHomoserine/homoserine lactone efflux protein2e-0652.8
NC_012917:4328463:433043543304354331037603Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeLysine exporter protein (LYSE/YGGA)2e-0652.4
NC_013850:3303500:332030333203033320941639Klebsiella variicola At-22 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)3e-0652
NC_009092:4585784:459073645907364591377642Shewanella loihica PV-4, complete genomeLysine exporter protein (LYSE/YGGA)3e-0652
NC_009648:1914621:192339819233981924018621Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeamino acid exporter (homoserine, HSL)5e-0651.2
NC_013929:3953046:396128039612803961933654Streptomyces scabiei 87.22 chromosome, complete genomeLysE family transporter4e-0651.2
NC_010623:1871492:187265918726591873270612Burkholderia phymatum STM815 chromosome 2, complete sequenceLysine exporter protein (LYSE/YGGA)6e-0650.8
NC_016845:2691129:270000127000012700546546Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,amino acid exporter6e-0650.8
NC_013166:1341575:134576013457601346383624Kangiella koreensis DSM 16069, complete genomeLysine exporter protein (LYSE/YGGA)6e-0650.8
NC_015567:2125415:214741321474132148036624Serratia sp. AS9 chromosome, complete genomelysine exporter protein LysE/YggA9e-0650.4
NC_015566:2125403:214740121474012148024624Serratia sp. AS12 chromosome, complete genomelysine exporter protein LysE/YggA9e-0650.4
NC_017317:134671:142366142366143031666Corynebacterium ulcerans 809 chromosome, complete genomehypothetical protein9e-0650.4
NC_016629:3789554:382537338253733826008636Desulfovibrio africanus str. Walvis Bay chromosome, completelysine exporter protein LysE/YggA9e-0650.1